Guide to the Human Genome
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Name: EHBP1 Sequence: fasta or formatted (1160aa) NCBI GI: 217330572
Description:

EH domain binding protein 1 isoform 3

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [1231aa] EH domain binding protein 1 isoform 1
alt prot [1196aa] EH domain binding protein 1 isoform 2
alt mRNA [1160aa] EH domain binding protein 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         72           2
 C cysteine            0.9         10           1
 D aspartate           6.6         77           3
 E glutamate          10.3        119           4
 F phenylalanine       2.8         32           1
 G glycine             3.0         35           1
 H histidine           1.3         15           2
 I isoleucine          3.0         35           1
 K lysine              9.1        105           3
 L leucine             9.3        108           3
 M methionine          1.9         22           2
 N asparagine          5.0         58           2
 P proline             5.4         63           3
 Q glutamine           5.6         65           2
 R arginine            6.2         72           3
 S serine              9.3        108           2
 T threonine           5.7         66           2
 V valine              5.3         62           3
 W tryptophan          0.9         10           1
 Y tyrosine            2.2         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EH domain binding protein 1 isoform 3 
EHBP1                 1.000   EH domain binding protein 1 isoform 3 
EHBP1                 0.992   EH domain binding protein 1 isoform 2 
EHBP1                 0.984   EH domain binding protein 1 isoform 1 
EHBP1L1               0.115   tangerin 
MICAL3                0.035   microtubule associated monoxygenase, calponin and L...
MICALL1               0.035   molecule interacting with Rab13 
MICALL2               0.034   MICAL-like 2 isoform 1 
CYTSA                 0.033   cytospin A 
CYTSA                 0.033   cytospin A 
MICAL3                0.032   microtubule associated monoxygenase, calponin and L...
MICAL3                0.032   microtubule associated monoxygenase, calponin and L...
MICAL2                0.030   microtubule associated monoxygenase, calponin and LIM...
SMTNL1                0.030   smoothelin-like 1 
CYTSB                 0.029   spectrin domain with coiled-coils 1 NSP5a3b 
CYTSB                 0.029   spectrin domain with coiled-coils 1 NSP5b3b 
MICALCL               0.029   MICAL C-terminal like 
SPTB                  0.027   spectrin beta isoform a 
SPTB                  0.027   spectrin beta isoform b 
ACTN1                 0.027   actinin, alpha 1 isoform c 
ACTN1                 0.027   actinin, alpha 1 isoform a 
ACTN1                 0.027   actinin, alpha 1 isoform b 
SPTBN4                0.027   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
ACTN2                 0.027   actinin, alpha 2 
ACTN3                 0.027   actinin, alpha 3 
SPTBN1                0.027   spectrin, beta, non-erythrocytic 1 isoform 2 
SPTBN1                0.027   spectrin, beta, non-erythrocytic 1 isoform 1 
SPTBN2                0.026   spectrin, beta, non-erythrocytic 2 
SYNE2                 0.026   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.026   spectrin repeat containing, nuclear envelope 2 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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