ACTN1 10868

Name: ACTN1	Sequence: fasta or formatted (914aa)		NCBI GI: 194097350
Description: actinin, alpha 1 isoform a		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [887aa] actinin, alpha 1 isoform c alt prot [892aa] actinin, alpha 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 72 2 C cysteine 1.2 11 1 D aspartate 7.1 65 2 E glutamate 9.2 84 2 F phenylalanine 3.3 30 1 G glycine 4.7 43 1 H histidine 3.0 27 1 I isoleucine 6.8 62 2 K lysine 6.1 56 2 L leucine 9.3 85 3 M methionine 3.4 31 2 N asparagine 4.8 44 2 P proline 3.3 30 2 Q glutamine 5.7 52 2 R arginine 6.0 55 2 S serine 4.0 37 2 T threonine 5.7 52 2 V valine 3.8 35 2 W tryptophan 1.8 16 1 Y tyrosine 3.0 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actinin, alpha 1 isoform a ACTN1 0.968 actinin, alpha 1 isoform b ACTN1 0.950 actinin, alpha 1 isoform c ACTN4 0.839 actinin, alpha 4 ACTN2 0.778 actinin, alpha 2 ACTN3 0.770 actinin, alpha 3 SPTBN1 0.230 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.230 spectrin, beta, non-erythrocytic 1 isoform 1 SPTB 0.222 spectrin beta isoform a SPTB 0.222 spectrin beta isoform b SPTBN2 0.220 spectrin, beta, non-erythrocytic 2 SPTBN4 0.208 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN5 0.175 spectrin, beta, non-erythrocytic 5 SPTAN1 0.140 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.140 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... PLEC1 0.119 plectin 1 isoform 11 PLEC1 0.119 plectin 1 isoform 10 PLEC1 0.119 plectin 1 isoform 8 PLEC1 0.119 plectin 1 isoform 7 PLEC1 0.119 plectin 1 isoform 6 PLEC1 0.119 plectin 1 isoform 3 PLEC1 0.119 plectin 1 isoform 2 PLEC1 0.119 plectin 1 isoform 1 LOC652460 0.117 PREDICTED: similar to plectin 1, partial DST 0.115 dystonin isoform 4 DST 0.115 dystonin isoform 3 DST 0.115 dystonin isoform 2 DST 0.115 dystonin isoform 1 MACF1 0.110 microfilament and actin filament cross-linker protei... SPTA1 0.103 spectrin, alpha, erythrocytic 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.