SPTBN1 971

Name: SPTBN1	Sequence: fasta or formatted (2364aa)		NCBI GI: 112382250
Description: spectrin, beta, non-erythrocytic 1 isoform 1		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [2155aa] spectrin, beta, non-erythrocytic 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 188 2 C cysteine 0.6 14 1 D aspartate 6.6 157 2 E glutamate 11.4 269 4 F phenylalanine 2.6 61 2 G glycine 3.3 78 1 H histidine 3.0 70 1 I isoleucine 4.9 116 3 K lysine 7.6 179 4 L leucine 10.4 246 3 M methionine 2.7 65 2 N asparagine 3.9 93 2 P proline 1.9 46 2 Q glutamine 6.5 153 3 R arginine 6.6 157 2 S serine 6.5 153 3 T threonine 4.9 115 3 V valine 4.6 109 2 W tryptophan 1.9 46 1 Y tyrosine 2.1 49 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spectrin, beta, non-erythrocytic 1 isoform 1 SPTBN1 0.886 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN2 0.636 spectrin, beta, non-erythrocytic 2 SPTB 0.600 spectrin beta isoform a SPTB 0.564 spectrin beta isoform b SPTBN4 0.462 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN5 0.194 spectrin, beta, non-erythrocytic 5 SPTBN4 0.139 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... SPTAN1 0.126 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.126 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTA1 0.117 spectrin, alpha, erythrocytic 1 ACTN4 0.091 actinin, alpha 4 ACTN1 0.090 actinin, alpha 1 isoform c ACTN1 0.090 actinin, alpha 1 isoform a ACTN1 0.090 actinin, alpha 1 isoform b ACTN3 0.088 actinin, alpha 3 ACTN2 0.087 actinin, alpha 2 PLEC1 0.081 plectin 1 isoform 3 PLEC1 0.081 plectin 1 isoform 1 PLEC1 0.081 plectin 1 isoform 7 PLEC1 0.081 plectin 1 isoform 2 PLEC1 0.081 plectin 1 isoform 11 PLEC1 0.081 plectin 1 isoform 10 PLEC1 0.081 plectin 1 isoform 8 PLEC1 0.081 plectin 1 isoform 6 MACF1 0.072 microfilament and actin filament cross-linker protei... LOC652460 0.067 PREDICTED: similar to plectin 1, partial DST 0.061 dystonin isoform 4 DST 0.061 dystonin isoform 3 DST 0.061 dystonin isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.