SPTBN1 972

Name: SPTBN1	Sequence: fasta or formatted (2155aa)		NCBI GI: 112382252
Description: spectrin, beta, non-erythrocytic 1 isoform 2		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [2364aa] spectrin, beta, non-erythrocytic 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 164 2 C cysteine 0.6 12 1 D aspartate 6.5 141 2 E glutamate 11.5 248 4 F phenylalanine 2.6 56 2 G glycine 3.5 75 1 H histidine 3.0 64 1 I isoleucine 5.0 107 3 K lysine 7.2 155 2 L leucine 11.1 239 3 M methionine 2.8 60 2 N asparagine 3.9 84 2 P proline 1.8 39 2 Q glutamine 6.9 149 3 R arginine 6.9 149 2 S serine 6.0 129 3 T threonine 4.5 98 2 V valine 4.5 96 2 W tryptophan 1.9 42 1 Y tyrosine 2.2 48 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.972 spectrin, beta, non-erythrocytic 1 isoform 1 SPTBN2 0.642 spectrin, beta, non-erythrocytic 2 SPTB 0.607 spectrin beta isoform a SPTB 0.607 spectrin beta isoform b SPTBN4 0.503 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN5 0.213 spectrin, beta, non-erythrocytic 5 SPTBN4 0.153 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... SPTAN1 0.138 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.138 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTA1 0.129 spectrin, alpha, erythrocytic 1 ACTN4 0.100 actinin, alpha 4 ACTN1 0.099 actinin, alpha 1 isoform c ACTN1 0.099 actinin, alpha 1 isoform a ACTN1 0.099 actinin, alpha 1 isoform b ACTN3 0.096 actinin, alpha 3 ACTN2 0.096 actinin, alpha 2 PLEC1 0.088 plectin 1 isoform 10 PLEC1 0.088 plectin 1 isoform 3 PLEC1 0.088 plectin 1 isoform 8 PLEC1 0.088 plectin 1 isoform 2 PLEC1 0.088 plectin 1 isoform 7 PLEC1 0.088 plectin 1 isoform 1 PLEC1 0.088 plectin 1 isoform 11 PLEC1 0.088 plectin 1 isoform 6 MACF1 0.079 microfilament and actin filament cross-linker protei... LOC652460 0.074 PREDICTED: similar to plectin 1, partial DST 0.067 dystonin isoform 4 DST 0.067 dystonin isoform 3 DST 0.067 dystonin isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.