Guide to the Human Genome
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Search of human proteins with 169234647

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens]
         (461 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens]               926   0.0  
gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens]               646   0.0  
gi|19913394 smoothelin isoform c [Homo sapiens]                       245   5e-65
gi|19913398 smoothelin isoform a [Homo sapiens]                       233   2e-61
gi|19913396 smoothelin isoform b [Homo sapiens]                       211   9e-55
gi|157738619 smoothelin-like 1 [Homo sapiens]                         164   2e-40
gi|224451082 cytospin A [Homo sapiens]                                 97   4e-20
gi|224451080 cytospin A [Homo sapiens]                                 97   4e-20
gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa...    92   1e-18
gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo sa...    92   1e-18
gi|67782321 spectrin beta isoform a [Homo sapiens]                     91   2e-18
gi|67782319 spectrin beta isoform b [Homo sapiens]                     91   2e-18
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]         91   2e-18
gi|150378549 tangerin [Homo sapiens]                                   91   3e-18
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [...    89   8e-18
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]                 88   1e-17
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]                 88   1e-17
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]                   88   1e-17
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ...    88   1e-17
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ...    88   1e-17
gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]           87   2e-17
gi|4557241 actinin, alpha 3 [Homo sapiens]                             87   4e-17
gi|4501893 actinin, alpha 2 [Homo sapiens]                             86   5e-17
gi|31324577 molecule interacting with Rab13 [Homo sapiens]             85   2e-16
gi|12025678 actinin, alpha 4 [Homo sapiens]                            83   6e-16
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]                      80   5e-15
gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]      79   1e-14
gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]      79   1e-14
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]      79   1e-14
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]      79   1e-14

>gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens]
          Length = 461

 Score =  926 bits (2392), Expect = 0.0
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MEPAPDAQEARTVREALGRYEAALEGAVRALHEDMRGLQRGVERRVAEAMRLAGPLARTV 60
           MEPAPDAQEARTVREALGRYEAALEGAVRALHEDMRGLQRGVERRVAEAMRLAGPLARTV
Sbjct: 1   MEPAPDAQEARTVREALGRYEAALEGAVRALHEDMRGLQRGVERRVAEAMRLAGPLARTV 60

Query: 61  ADLQRDNQRLQAQLERLTRQVEALGLASGMSPVPGTPGTPSPPPAPGVPDRAPRLGSARF 120
           ADLQRDNQRLQAQLERLTRQVEALGLASGMSPVPGTPGTPSPPPAPGVPDRAPRLGSARF
Sbjct: 61  ADLQRDNQRLQAQLERLTRQVEALGLASGMSPVPGTPGTPSPPPAPGVPDRAPRLGSARF 120

Query: 121 ASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDP 180
           ASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDP
Sbjct: 121 ASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDP 180

Query: 181 PRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTP 240
           PRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTP
Sbjct: 181 PRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTP 240

Query: 241 SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRREL 300
           SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRREL
Sbjct: 241 SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRREL 300

Query: 301 VRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEW 360
           VRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEW
Sbjct: 301 VRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEW 360

Query: 361 CRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAE 420
           CRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAE
Sbjct: 361 CRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAE 420

Query: 421 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
           NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE
Sbjct: 421 NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461


>gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens]
          Length = 317

 Score =  646 bits (1667), Expect = 0.0
 Identities = 317/317 (100%), Positives = 317/317 (100%)

Query: 145 MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS 204
           MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS
Sbjct: 1   MRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVS 60

Query: 205 DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS 264
           DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS
Sbjct: 61  DRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTAS 120

Query: 265 KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ 324
           KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ
Sbjct: 121 KHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQ 180

Query: 325 ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM 384
           ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM
Sbjct: 181 ETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGM 240

Query: 385 AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM 444
           AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM
Sbjct: 241 AFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPM 300

Query: 445 CVFTYVQSLYNHLRRFE 461
           CVFTYVQSLYNHLRRFE
Sbjct: 301 CVFTYVQSLYNHLRRFE 317


>gi|19913394 smoothelin isoform c [Homo sapiens]
          Length = 917

 Score =  245 bits (626), Expect = 5e-65
 Identities = 121/218 (55%), Positives = 166/218 (76%), Gaps = 5/218 (2%)

Query: 245 KNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVH-RQGERRRELVRS 303
           +N S +  + +  + + ++SK   S   +   +   SP+  ++  +  RQ E+++EL+++
Sbjct: 696 ENGSGSTMMQTKTFSSSSSSKKMGS---IFDREDQASPRAGSLAALEKRQAEKKKELMKA 752

Query: 304 QTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRS 363
           Q+LP+TS +QARKA+ EK E+E AAG   G  RA ++RS SFGV +A+SIKQ+LL+WCR+
Sbjct: 753 QSLPKTSASQARKAMIEKLEKEGAAGS-PGGPRAAVQRSTSFGVPNANSIKQMLLDWCRA 811

Query: 364 KTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLA 423
           KT GY+HVD+QNFSSSWSDGMAFCALVH+FFP+AFDY  LSP  R++NFE+AF+ AE L 
Sbjct: 812 KTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAEMLV 871

Query: 424 NCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
           +C  L+EV+DMM+MG+KPDP CVFTYVQSLYNHLRR E
Sbjct: 872 DCVPLVEVDDMMIMGKKPDPKCVFTYVQSLYNHLRRHE 909



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 45/174 (25%), Positives = 63/174 (36%), Gaps = 44/174 (25%)

Query: 97  PGTPSPPPAPGVPDRAPRLGSARFASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMEN 156
           PG+P PPP+P      P+  S       T   S  GQ ++   +   E     +      
Sbjct: 231 PGSPEPPPSP------PKTTSPEPQESPTLP-STEGQVVNKLLSGPKETPAAQS------ 277

Query: 157 GHQPGAGPGD-------GPPEIAQNFSAPDPPRPRPVSLSLRLPHQP------------- 196
              P  GP D       GP    ++ S   P +P     S  L   P             
Sbjct: 278 ---PTRGPSDTKRADVAGPRPCQRSLSVLSPRQPAQNRESTPLASGPSSFQRAGSVRDRV 334

Query: 197 --VTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSS 248
              T+ + ++ R    T  AALSP++ A L  L PS    +T  TP+ S   SS
Sbjct: 335 HKFTSDSPMAARLQDGTPQAALSPLTPARL--LGPS----LTSTTPASSSSGSS 382


>gi|19913398 smoothelin isoform a [Homo sapiens]
          Length = 940

 Score =  233 bits (595), Expect = 2e-61
 Identities = 121/241 (50%), Positives = 167/241 (69%), Gaps = 28/241 (11%)

Query: 245 KNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVH-RQGERRRELVRS 303
           +N S +  + +  + + ++SK   S   +   +   SP+  ++  +  RQ E+++EL+++
Sbjct: 696 ENGSGSTMMQTKTFSSSSSSKKMGS---IFDREDQASPRAGSLAALEKRQAEKKKELMKA 752

Query: 304 QTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRS 363
           Q+LP+TS +QARKA+ EK E+E AAG   G  RA ++RS SFGV +A+SIKQ+LL+WCR+
Sbjct: 753 QSLPKTSASQARKAMIEKLEKEGAAGS-PGGPRAAVQRSTSFGVPNANSIKQMLLDWCRA 811

Query: 364 KTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLA 423
           KT GY+HVD+QNFSSSWSDGMAFCALVH+FFP+AFDY  LSP  R++NFE+AF+ AE  A
Sbjct: 812 KTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHA 871

Query: 424 NCER-----------------------LIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRF 460
           +C +                       L+EV+DMM+MG+KPDP CVFTYVQSLYNHLRR 
Sbjct: 872 DCPQLLDTEDMVRLREPDWKMLVDCVPLVEVDDMMIMGKKPDPKCVFTYVQSLYNHLRRH 931

Query: 461 E 461
           E
Sbjct: 932 E 932



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 45/174 (25%), Positives = 63/174 (36%), Gaps = 44/174 (25%)

Query: 97  PGTPSPPPAPGVPDRAPRLGSARFASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMEN 156
           PG+P PPP+P      P+  S       T   S  GQ ++   +   E     +      
Sbjct: 231 PGSPEPPPSP------PKTTSPEPQESPTLP-STEGQVVNKLLSGPKETPAAQS------ 277

Query: 157 GHQPGAGPGD-------GPPEIAQNFSAPDPPRPRPVSLSLRLPHQP------------- 196
              P  GP D       GP    ++ S   P +P     S  L   P             
Sbjct: 278 ---PHRGPSDTKRADVAGPRPCQRSLSVLSPRQPAQNRESTPLASGPSSFQRAGSVRDRV 334

Query: 197 --VTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSS 248
              T+ + ++ R    T  AALSP++ A L  L PS    +T  TP+ S   SS
Sbjct: 335 HKFTSDSPMAARLQDGTPQAALSPLTPARL--LGPS----LTSTTPASSSSGSS 382


>gi|19913396 smoothelin isoform b [Homo sapiens]
          Length = 915

 Score =  211 bits (538), Expect = 9e-55
 Identities = 107/214 (50%), Positives = 156/214 (72%), Gaps = 6/214 (2%)

Query: 245 KNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVH-RQGERRRELVRS 303
           +N S +  + +  + + ++SK   S   +   +   SP+  ++  +  RQ E+++EL+++
Sbjct: 696 ENGSGSTMMQTKTFSSSSSSKKMGS---IFDREDQASPRAGSLAALEKRQAEKKKELMKA 752

Query: 304 QTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRS 363
           Q+LP+TS +QARKA+ EK E+E AAG   G  RA ++RS SFGV +A+SIKQ+LL+WCR+
Sbjct: 753 QSLPKTSASQARKAMIEKLEKEGAAGS-PGGPRAAVQRSTSFGVPNANSIKQMLLDWCRA 811

Query: 364 KTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLA 423
           KT GY+HVD+QNFSSSWSDGMAFCALVH+FFP+AFDY  LSP  R++NFE+AF+ AE  A
Sbjct: 812 KTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHA 871

Query: 424 NCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHL 457
           +C +L++ EDM+ + R+PD  CV+TY+Q  Y  L
Sbjct: 872 DCPQLLDTEDMVRL-REPDWKCVYTYIQEFYRCL 904



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 45/174 (25%), Positives = 63/174 (36%), Gaps = 44/174 (25%)

Query: 97  PGTPSPPPAPGVPDRAPRLGSARFASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMEN 156
           PG+P PPP+P      P+  S       T   S  GQ ++   +   E     +      
Sbjct: 231 PGSPEPPPSP------PKTTSPEPQESPTLP-STEGQVVNKLLSGPKETPAAQS------ 277

Query: 157 GHQPGAGPGD-------GPPEIAQNFSAPDPPRPRPVSLSLRLPHQP------------- 196
              P  GP D       GP    ++ S   P +P     S  L   P             
Sbjct: 278 ---PTRGPSDTKRADVAGPRPCQRSLSVLSPRQPAQNRESTPLASGPSSFQRAGSVRDRV 334

Query: 197 --VTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSS 248
              T+ + ++ R    T  AALSP++ A L  L PS    +T  TP+ S   SS
Sbjct: 335 HKFTSDSPMAARLQDGTPQAALSPLTPARL--LGPS----LTSTTPASSSSGSS 382


>gi|157738619 smoothelin-like 1 [Homo sapiens]
          Length = 512

 Score =  164 bits (414), Expect = 2e-40
 Identities = 97/237 (40%), Positives = 135/237 (56%), Gaps = 24/237 (10%)

Query: 226 GLNPSPSEVITPWTPSPSEKNSSFTWS-----VPSSGYGAVTASKHSNSPPLVTPPQSPV 280
           G+ PS  E    W  SP+ +  + +         +SG  + +AS+ S S    +PP+SP 
Sbjct: 284 GVIPSSPE---EWPESPTGEGHNLSTDGLGPDCVASGQTSPSASESSPSDVPQSPPESPS 340

Query: 281 SPQPPAITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLK 340
           S +     +  +  ERR   V +   PR   AQ RKA+ +K+        G       L 
Sbjct: 341 SGE-----KKEKAPERR---VSAPARPRGPRAQNRKAIVDKFG-------GAASGPTALF 385

Query: 341 RSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDY 400
           R+     A+   +K +LLEWCR+ T  Y+HVD+QNFSSSWS GMAFCAL+H FFPDAFDY
Sbjct: 386 RNTKAAGAAIGGVKNMLLEWCRAMTKKYEHVDIQNFSSSWSSGMAFCALIHKFFPDAFDY 445

Query: 401 NSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHL 457
             L P +R+ NF LAF+ AE LA+C +L++V+DM+ +   PD  CV+TY+Q LY  L
Sbjct: 446 AELDPAKRRHNFTLAFSTAEKLADCAQLLDVDDMVRLA-VPDSKCVYTYIQELYRSL 501


>gi|224451082 cytospin A [Homo sapiens]
          Length = 1117

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 50/269 (18%)

Query: 229  PSPSEVITPWTP-SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTP-PQSPVSPQPPA 286
            P+P+    P TP SPS   +      P++    +   +HS S P+ T  P + +S + P 
Sbjct: 855  PNPAAAAIPRTPLSPSPMKTP-----PAAAVSPM--QRHSISGPISTSKPLTALSDKRPN 907

Query: 287  ITQVHRQGE--RRRELVRSQTLPRTSEAQARKALF------EKWEQETAAGKGKGEA--- 335
              ++  Q    R     R  +LPR    ++ K L       E+ +++ +A +G   A   
Sbjct: 908  YGEIPVQEHLLRTSSASRPASLPRVPAMESAKTLSVSRRSSEEVKRDISAQEGASPASLM 967

Query: 336  -----------------------RARLKRSQSFGVASAS-----SIKQILLEWCRSKTLG 367
                                   R+R++  +   +++ +     S +  LL+WC+ KT G
Sbjct: 968  AMGTTSPQLSLSSSPTASVTPTTRSRIREERKDPLSALAREYGGSKRNALLKWCQKKTEG 1027

Query: 368  YQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCER 427
            YQ++D+ NFSSSW+DG+AFCAL+H++ P    Y  L+   +++NF LAF  AE++   + 
Sbjct: 1028 YQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQDKRRNFMLAFQAAESV-GIKS 1086

Query: 428  LIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
             +++ + MV   +PD   V  YV ++Y +
Sbjct: 1087 TLDINE-MVRTERPDWQNVMLYVTAIYKY 1114


>gi|224451080 cytospin A [Homo sapiens]
          Length = 1117

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 50/269 (18%)

Query: 229  PSPSEVITPWTP-SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTP-PQSPVSPQPPA 286
            P+P+    P TP SPS   +      P++    +   +HS S P+ T  P + +S + P 
Sbjct: 855  PNPAAAAIPRTPLSPSPMKTP-----PAAAVSPM--QRHSISGPISTSKPLTALSDKRPN 907

Query: 287  ITQVHRQGE--RRRELVRSQTLPRTSEAQARKALF------EKWEQETAAGKGKGEA--- 335
              ++  Q    R     R  +LPR    ++ K L       E+ +++ +A +G   A   
Sbjct: 908  YGEIPVQEHLLRTSSASRPASLPRVPAMESAKTLSVSRRSSEEVKRDISAQEGASPASLM 967

Query: 336  -----------------------RARLKRSQSFGVASAS-----SIKQILLEWCRSKTLG 367
                                   R+R++  +   +++ +     S +  LL+WC+ KT G
Sbjct: 968  AMGTTSPQLSLSSSPTASVTPTTRSRIREERKDPLSALAREYGGSKRNALLKWCQKKTEG 1027

Query: 368  YQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCER 427
            YQ++D+ NFSSSW+DG+AFCAL+H++ P    Y  L+   +++NF LAF  AE++   + 
Sbjct: 1028 YQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQDKRRNFMLAFQAAESV-GIKS 1086

Query: 428  LIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
             +++ + MV   +PD   V  YV ++Y +
Sbjct: 1087 TLDINE-MVRTERPDWQNVMLYVTAIYKY 1114


>gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo
           sapiens]
          Length = 987

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 40/320 (12%)

Query: 159 QPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQ-PVTAITRVSDR--FSGETSAAA 215
           Q   G   G   +  + +AP P    P S  +    + P   ++R S     S  T  + 
Sbjct: 683 QKELGDVQGHGRVVTSRAAPPPVDEEPESSEVDAAGRWPGVCVSRTSPTPPESATTVKSL 742

Query: 216 LSPMSAATLGGLNPSPSEVITPWTP--------------SPSEKNSSFTWSVPSSGYGAV 261
           +        GG   + S   TP +P              SP +++S+++   P+S    V
Sbjct: 743 IKSFDLGRPGGAGQNISVHKTPRSPLSGIPVRTAPAAAVSPMQRHSTYSSVRPASR--GV 800

Query: 262 TASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRT-----SEAQARK 316
           T          +  P  P+S      T+  +     R+    ++L R       + +   
Sbjct: 801 TQR--------LDLPDLPLSDILKGRTETLKPDPHLRKSPSLESLSRPPSLGFGDTRLLS 852

Query: 317 ALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNF 376
           A    W+ ++     + +  A L R          S +  LL+WC+ KT GY ++D+ NF
Sbjct: 853 ASTRAWKPQSKLSVERKDPLAALAREYG------GSKRNALLKWCQKKTQGYANIDITNF 906

Query: 377 SSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMV 436
           SSSWSDG+AFCAL+H++ P    Y  L+  ++++N  LAF  AE++   +  +E+ +M+ 
Sbjct: 907 SSSWSDGLAFCALLHTYLPAHIPYQELNSQEKKRNLLLAFEAAESV-GIKPSLELSEMLY 965

Query: 437 MGRKPDPMCVFTYVQSLYNH 456
             R PD   V  YV  +Y +
Sbjct: 966 TDR-PDWQSVMQYVAQIYKY 984


>gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo
            sapiens]
          Length = 1068

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 40/320 (12%)

Query: 159  QPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQ-PVTAITRVSDR--FSGETSAAA 215
            Q   G   G   +  + +AP P    P S  +    + P   ++R S     S  T  + 
Sbjct: 764  QKELGDVQGHGRVVTSRAAPPPVDEEPESSEVDAAGRWPGVCVSRTSPTPPESATTVKSL 823

Query: 216  LSPMSAATLGGLNPSPSEVITPWTP--------------SPSEKNSSFTWSVPSSGYGAV 261
            +        GG   + S   TP +P              SP +++S+++   P+S    V
Sbjct: 824  IKSFDLGRPGGAGQNISVHKTPRSPLSGIPVRTAPAAAVSPMQRHSTYSSVRPASR--GV 881

Query: 262  TASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRT-----SEAQARK 316
            T          +  P  P+S      T+  +     R+    ++L R       + +   
Sbjct: 882  TQR--------LDLPDLPLSDILKGRTETLKPDPHLRKSPSLESLSRPPSLGFGDTRLLS 933

Query: 317  ALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVDLQNF 376
            A    W+ ++     + +  A L R          S +  LL+WC+ KT GY ++D+ NF
Sbjct: 934  ASTRAWKPQSKLSVERKDPLAALAREYG------GSKRNALLKWCQKKTQGYANIDITNF 987

Query: 377  SSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVEDMMV 436
            SSSWSDG+AFCAL+H++ P    Y  L+  ++++N  LAF  AE++   +  +E+ +M+ 
Sbjct: 988  SSSWSDGLAFCALLHTYLPAHIPYQELNSQEKKRNLLLAFEAAESV-GIKPSLELSEMLY 1046

Query: 437  MGRKPDPMCVFTYVQSLYNH 456
              R PD   V  YV  +Y +
Sbjct: 1047 TDR-PDWQSVMQYVAQIYKY 1065


>gi|67782321 spectrin beta isoform a [Homo sapiens]
          Length = 2328

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%)

Query: 352 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 411
           S K  LL WC+ KT GY HV++ NF+SSW DG+AF AL+H   PD  D++ L  +  + N
Sbjct: 174 SAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHN 233

Query: 412 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
            E AF +AE       L++ ED  V    PD   + TYV + Y++  + +
Sbjct: 234 LEHAFNVAERQLGIIPLLDPED--VFTENPDEKSIITYVVAFYHYFSKMK 281


>gi|67782319 spectrin beta isoform b [Homo sapiens]
          Length = 2137

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%)

Query: 352 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 411
           S K  LL WC+ KT GY HV++ NF+SSW DG+AF AL+H   PD  D++ L  +  + N
Sbjct: 174 SAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHN 233

Query: 412 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
            E AF +AE       L++ ED  V    PD   + TYV + Y++  + +
Sbjct: 234 LEHAFNVAERQLGIIPLLDPED--VFTENPDEKSIITYVVAFYHYFSKMK 281


>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
          Length = 3639

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 3/118 (2%)

Query: 343 QSFGVASAS-SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYN 401
           + FG ++A  S K+ LL WC+ KT  Y +V++ +FS SWSDG+ F AL+H+  PD  DY 
Sbjct: 133 EEFGASAALLSTKEALLVWCQRKTASYTNVNITDFSRSWSDGLGFNALIHAHRPDLLDYG 192

Query: 402 SLSPTQRQKNFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRR 459
           SL P +   N   AF +AE      +L++ ED  V   +PD   + TYV   Y++  R
Sbjct: 193 SLRPDRPLHNLAFAFLVAEQELGIAQLLDPED--VAAAQPDERSIMTYVSLYYHYCSR 248


>gi|150378549 tangerin [Homo sapiens]
          Length = 1523

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 14/138 (10%)

Query: 323  EQETAAGKGKGEARA----------RLKRSQSFGVASASSIKQILLEWCRSKTLGYQHVD 372
            E + A+G G G  RA          RL  SQ+     +SS  Q LLEWC+  T GY+ V 
Sbjct: 1001 EAQVASGAGAGAPRASSPEKAEEDRRLPGSQAPPALVSSS--QSLLEWCQEVTTGYRGVR 1058

Query: 373  LQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAENLANCERLIEVE 432
            + NF++SW +G+AFCA++H F+PD  DY SL P   ++N + AF     L    RL+E  
Sbjct: 1059 ITNFTTSWRNGLAFCAILHRFYPDKIDYASLDPLNIKQNNKQAFDGFAAL-GVSRLLEPA 1117

Query: 433  DMMVMGRKPDPMCVFTYV 450
            DM+++   PD + V TY+
Sbjct: 1118 DMVLLS-VPDKLIVMTYL 1134


>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1
           [Homo sapiens]
          Length = 2564

 Score = 89.0 bits (219), Expect = 8e-18
 Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 2/110 (1%)

Query: 352 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 411
           S K  LL WC+ KT GY  V++QNF++SW DG+AF AL+H   PD  D++ L+ +    N
Sbjct: 181 SAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANYN 240

Query: 412 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
            + AF  AE      RL++ ED+ +    PD   + TYV S Y++  + +
Sbjct: 241 LQRAFRTAEQHLGLARLLDPEDVNM--EAPDEKSIITYVVSFYHYFSKMK 288


>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
          Length = 887

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)

Query: 351 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 410
           +S K+ LL WC+ KT  Y++V++QNF  SW DG+ FCAL+H   P+  DY  L       
Sbjct: 144 TSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLT 203

Query: 411 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 455
           N   AF +AE   +  ++++ ED++   R PD   + TYV S Y+
Sbjct: 204 NLNTAFDVAEKYLDIPKMLDAEDIVGTAR-PDEKAIMTYVSSFYH 247


>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
          Length = 914

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)

Query: 351 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 410
           +S K+ LL WC+ KT  Y++V++QNF  SW DG+ FCAL+H   P+  DY  L       
Sbjct: 144 TSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLT 203

Query: 411 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 455
           N   AF +AE   +  ++++ ED++   R PD   + TYV S Y+
Sbjct: 204 NLNTAFDVAEKYLDIPKMLDAEDIVGTAR-PDEKAIMTYVSSFYH 247


>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
          Length = 892

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)

Query: 351 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 410
           +S K+ LL WC+ KT  Y++V++QNF  SW DG+ FCAL+H   P+  DY  L       
Sbjct: 144 TSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLT 203

Query: 411 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 455
           N   AF +AE   +  ++++ ED++   R PD   + TYV S Y+
Sbjct: 204 NLNTAFDVAEKYLDIPKMLDAEDIVGTAR-PDEKAIMTYVSSFYH 247


>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
           sapiens]
          Length = 2155

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 2/110 (1%)

Query: 352 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 411
           S K  LL WC+ KT GY +V++ NF++SW DGMAF AL+H   PD  D++ L  +    N
Sbjct: 161 SAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYN 220

Query: 412 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
            + AF +AE      +L++ ED+ V    PD   + TYV + Y++  + +
Sbjct: 221 LQNAFNLAEQHLGLTKLLDPEDISV--DHPDEKSIITYVVTYYHYFSKMK 268


>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
           sapiens]
          Length = 2364

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 2/110 (1%)

Query: 352 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 411
           S K  LL WC+ KT GY +V++ NF++SW DGMAF AL+H   PD  D++ L  +    N
Sbjct: 174 SAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYN 233

Query: 412 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
            + AF +AE      +L++ ED+ V    PD   + TYV + Y++  + +
Sbjct: 234 LQNAFNLAEQHLGLTKLLDPEDISV--DHPDEKSIITYVVTYYHYFSKMK 281


>gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]
          Length = 2390

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 2/110 (1%)

Query: 352 SIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKN 411
           S K  LL WC+ KT GY +V++ NF++SW DG+AF A+VH   PD  D+ SL       N
Sbjct: 177 SAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYN 236

Query: 412 FELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRRFE 461
            + AF +AE      +L++ ED+ V   +PD   + TYV + Y++  + +
Sbjct: 237 LQNAFNLAEKELGLTKLLDPEDVNV--DQPDEKSIITYVATYYHYFSKMK 284


>gi|4557241 actinin, alpha 3 [Homo sapiens]
          Length = 901

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 1/105 (0%)

Query: 351 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 410
           +S K+ LL WC+ KT  Y++V++QNF +SW DG+A CAL+H   PD  DY  L       
Sbjct: 158 TSAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIG 217

Query: 411 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 455
           N   AF +AE   +  ++++ ED +V   KPD   + TYV   Y+
Sbjct: 218 NLNTAFEVAEKYLDIPKMLDAED-IVNTPKPDEKAIMTYVSCFYH 261


>gi|4501893 actinin, alpha 2 [Homo sapiens]
          Length = 894

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 1/105 (0%)

Query: 351 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 410
           +S K+ LL WC+ KT  Y++V++QNF +SW DG+  CAL+H   PD  DY+ L+      
Sbjct: 151 TSAKEGLLLWCQRKTAPYRNVNIQNFHTSWKDGLGLCALIHRHRPDLIDYSKLNKDDPIG 210

Query: 411 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 455
           N  LA  +AE   +  ++++ ED +V   KPD   + TYV   Y+
Sbjct: 211 NINLAMEIAEKHLDIPKMLDAED-IVNTPKPDERAIMTYVSCFYH 254


>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
          Length = 863

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)

Query: 357 LLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAF 416
           LL WCR +  GY+ V++++ SSS+ DG+AFCA++H   PD  D++SLS     +N  LAF
Sbjct: 8   LLAWCRRQCEGYRGVEIRDLSSSFRDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRLAF 67

Query: 417 TMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
            +AE       L++  DM+ M   PD + + TYV   YNH
Sbjct: 68  EVAEKELGIPALLDPNDMVSMS-VPDCLSIMTYVSQYYNH 106



 Score = 34.7 bits (78), Expect = 0.19
 Identities = 50/216 (23%), Positives = 77/216 (35%), Gaps = 33/216 (15%)

Query: 90  MSPVPGTPGTPSPP----PAPGVPDRAPRLGSARFASHATFSLSGRGQSLDHDEASESEM 145
           + P  G   T SP     PAP  P  +P    A   SH+    +    +L  +  S    
Sbjct: 460 LHPWYGITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPPSATPSPALSVESLSSESA 519

Query: 146 RKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRP----RPVSLSLR--------LP 193
            +T+ + ++E            PP + ++ S P    P     PVSLS          L 
Sbjct: 520 SQTAGAELLE------------PPAVPKSSSEPAVHAPGTPGNPVSLSTNSSLASSGELV 567

Query: 194 HQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFTWSV 253
              V  + + S   +  T  ++  P  A    G  P+P  ++   +P PS  +SS    V
Sbjct: 568 EPRVEQMPQASPGLAPRTRGSS-GPQPAKPCSGATPTPLLLVGDRSPVPSPGSSSPQLQV 626

Query: 254 PSS----GYGAVTASKHSNSPPLVTPPQSPVSPQPP 285
            SS     +    +   S +    T    PV P  P
Sbjct: 627 KSSCKENPFNRKPSPAASPATKKATKGSKPVRPPAP 662



 Score = 34.3 bits (77), Expect = 0.24
 Identities = 67/296 (22%), Positives = 106/296 (35%), Gaps = 49/296 (16%)

Query: 26  GAVRALHEDMRGLQRGVERRVAEAMRLAGPLARTVADLQRDNQRLQAQLERLTRQVEALG 85
           G ++ L     G      R+ +E+   A P  R  + LQ++N         L  Q  +  
Sbjct: 288 GKLQELASPPAGRPTPAPRKASESTTPAPPTPRPRSSLQQEN---------LVEQAGSSS 338

Query: 86  LASGMS---PVPGTPGTPSPPPAPGVPDRAPRLGSARFASHATFSLSGRGQSLDHDEASE 142
           L +G     PVP   GTP P      P + P           T   +   +       S 
Sbjct: 339 LVNGRLHELPVPKPRGTPKPSEGTPAPRKDP--------PWITLVQAEPKKKPAPLPPSS 390

Query: 143 SEMRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITR 202
           S    + +S  +ENG         G  E+AQ         P P +     P+ P      
Sbjct: 391 SPGPPSQDSRQVENG---------GTEEVAQ---------PSPTASLESKPYNPF----E 428

Query: 203 VSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPW---TPSPSEKNSSF-TWSVPSSGY 258
             +    E + AA S  ++  LG    +P   + PW   TP+ S K         PS+  
Sbjct: 429 EEEEDKEEEAPAAPSLATSPALGHPESTPKS-LHPWYGITPTSSPKTKKRPAPRAPSASP 487

Query: 259 GAVTASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRRELVRSQTLPRTSEAQA 314
            A+ AS+ S+S P    P   +S +  +++          EL+    +P++S   A
Sbjct: 488 LALHASRLSHSEPPSATPSPALSVE--SLSSESASQTAGAELLEPPAVPKSSSEPA 541


>gi|12025678 actinin, alpha 4 [Homo sapiens]
          Length = 911

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 1/105 (0%)

Query: 351 SSIKQILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQK 410
           +S K+ LL WC+ KT  Y++V++QNF  SW DG+AF AL+H   P+  +Y+ L       
Sbjct: 163 TSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVT 222

Query: 411 NFELAFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYN 455
           N   AF +AE   +  ++++ ED++   R PD   + TYV S Y+
Sbjct: 223 NLNNAFEVAEKYLDIPKMLDAEDIVNTAR-PDEKAIMTYVSSFYH 266


>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
          Length = 904

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 1/100 (1%)

Query: 357 LLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAF 416
           L +WCR +  GY+ V++ N ++S+ DG+AFCA++H   PD  ++++L      +N +LAF
Sbjct: 7   LQQWCRQQCEGYRDVNICNMTTSFRDGLAFCAILHRHRPDLINFSALKKENIYENNKLAF 66

Query: 417 TMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
            +AE       L++ EDM+ + + PD + + TYV   YN+
Sbjct: 67  RVAEEHLGIPALLDAEDMVAL-KVPDRLSILTYVSQYYNY 105



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 56/273 (20%), Positives = 90/273 (32%), Gaps = 28/273 (10%)

Query: 63  LQRDNQRLQAQ--LERLTRQVEALGLASGMSPVPGTPGTPSPPPAPGVPDRAPRLGSARF 120
           L +D+ + QA+  L++    +E  G  +   P P T   PS  P    P  +P     + 
Sbjct: 443 LSKDSSKEQARNFLKQALSALEEAGAPAPGRPSPATAAVPSSQPKTEAPQASPLAKPLQS 502

Query: 121 ASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDP 180
           +S     L  R      +  +      TS +  +    +       G   +    S P P
Sbjct: 503 SSPRVLGLPSR-----MEPPAPLSTSSTSQASALPPAGRRNLAESSGVGRVGAG-SRPKP 556

Query: 181 PRPRPVSLSLRLPHQPVTAITRVSDRFSGETS-AAALSPMSAATLGGLNPSPSEVITPWT 239
             P     S  L     T++    +   G     A L P+   +       P E      
Sbjct: 557 EAPMAKGKSTTLTQDMSTSLQEGQE--DGPAGWRANLKPVDRRSPAERTLKPKEPRALAE 614

Query: 240 PSPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTP-PQSPV-SPQPPAITQVHRQGERR 297
           P   E     + S   S +  +T  +   +P   +P P  P  SP PP          RR
Sbjct: 615 PRAGEAPRKVSGSFAGSVHITLTPVRPDRTPRPASPGPSLPARSPSPP----------RR 664

Query: 298 RELVRSQTLP-----RTSEAQARKALFEKWEQE 325
           R L    +L         E   ++A  + W++E
Sbjct: 665 RRLAVPASLDVCDNWLRPEPPGQEARVQSWKEE 697


>gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]
          Length = 1160

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)

Query: 355 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 414
           Q LL WC+  T  Y+ V + NF++SW +G++FCA++H F PD  DY SL+P   ++N + 
Sbjct: 412 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 471

Query: 415 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
           A+    ++    RL+E  DM+++   PD + V TY+  +  H
Sbjct: 472 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 511


>gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]
          Length = 1160

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)

Query: 355 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 414
           Q LL WC+  T  Y+ V + NF++SW +G++FCA++H F PD  DY SL+P   ++N + 
Sbjct: 412 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 471

Query: 415 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
           A+    ++    RL+E  DM+++   PD + V TY+  +  H
Sbjct: 472 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 511


>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
          Length = 1196

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)

Query: 355 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 414
           Q LL WC+  T  Y+ V + NF++SW +G++FCA++H F PD  DY SL+P   ++N + 
Sbjct: 412 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 471

Query: 415 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
           A+    ++    RL+E  DM+++   PD + V TY+  +  H
Sbjct: 472 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 511


>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
          Length = 1231

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)

Query: 355 QILLEWCRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFEL 414
           Q LL WC+  T  Y+ V + NF++SW +G++FCA++H F PD  DY SL+P   ++N + 
Sbjct: 447 QSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKK 506

Query: 415 AFTMAENLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNH 456
           A+    ++    RL+E  DM+++   PD + V TY+  +  H
Sbjct: 507 AYDGFASI-GISRLLEPSDMVLLA-IPDKLTVMTYLYQIRAH 546


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.128    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,948,824
Number of Sequences: 37866
Number of extensions: 1183444
Number of successful extensions: 15893
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 706
Number of HSP's that attempted gapping in prelim test: 10892
Number of HSP's gapped (non-prelim): 5158
length of query: 461
length of database: 18,247,518
effective HSP length: 106
effective length of query: 355
effective length of database: 14,233,722
effective search space: 5052971310
effective search space used: 5052971310
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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