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Search of human proteins with 169216776
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169216776 PREDICTED: similar to RAN binding protein 1 [Homo
sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169216167 PREDICTED: similar to RAN binding protein 1 [Homo s... 414 e-116
gi|169216776 PREDICTED: similar to RAN binding protein 1 [Homo s... 414 e-116
gi|4506407 RAN binding protein 1 [Homo sapiens] 398 e-111
gi|239757769 PREDICTED: similar to RAN binding protein 1 [Homo s... 291 2e-79
gi|150418007 RAN binding protein 2 [Homo sapiens] 166 1e-41
gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapi... 137 6e-33
gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8... 135 3e-32
gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [... 135 3e-32
gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapi... 135 3e-32
gi|157266273 RANBP2-like and GRIP domain containing 1 [Homo sapi... 133 9e-32
gi|118200331 RANBP2-like and GRIP domain containing 2 [Homo sapi... 133 9e-32
gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo sapi... 130 8e-31
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 35 0.033
gi|154426331 early undifferentiated retina and lens isoform 1 [H... 35 0.033
gi|44890059 involucrin [Homo sapiens] 34 0.096
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 33 0.16
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.21
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 33 0.21
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 32 0.28
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 32 0.28
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 32 0.28
gi|190194423 SPARC-like 1 [Homo sapiens] 32 0.28
gi|190341024 SPARC-like 1 [Homo sapiens] 32 0.28
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 32 0.36
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 32 0.47
gi|162287219 prune homolog 2 [Homo sapiens] 31 0.62
gi|16262452 cingulin [Homo sapiens] 31 0.62
gi|24307965 UBX domain containing 2 [Homo sapiens] 31 0.81
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi... 31 0.81
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 30 1.1
>gi|169216167 PREDICTED: similar to RAN binding protein 1 [Homo
sapiens]
Length = 201
Score = 414 bits (1065), Expect = e-116
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS
Sbjct: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
Query: 181 AEKLEALSVKEDTKEDAEEKQ 201
AEKLEALSVKEDTKEDAEEKQ
Sbjct: 181 AEKLEALSVKEDTKEDAEEKQ 201
>gi|169216776 PREDICTED: similar to RAN binding protein 1 [Homo
sapiens]
Length = 201
Score = 414 bits (1065), Expect = e-116
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS
Sbjct: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
Query: 181 AEKLEALSVKEDTKEDAEEKQ 201
AEKLEALSVKEDTKEDAEEKQ
Sbjct: 181 AEKLEALSVKEDTKEDAEEKQ 201
>gi|4506407 RAN binding protein 1 [Homo sapiens]
Length = 201
Score = 398 bits (1023), Expect = e-111
Identities = 194/201 (96%), Positives = 196/201 (97%)
Query: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
MAA KDTHEDHDTSTENTDE NHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAK RFAS
Sbjct: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLM+RDKTLKICANHY TPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV
Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180
Query: 181 AEKLEALSVKEDTKEDAEEKQ 201
AEKLEALSVKE+TKEDAEEKQ
Sbjct: 181 AEKLEALSVKEETKEDAEEKQ 201
>gi|239757769 PREDICTED: similar to RAN binding protein 1 [Homo
sapiens]
Length = 178
Score = 291 bits (746), Expect = 2e-79
Identities = 144/173 (83%), Positives = 150/173 (86%), Gaps = 9/173 (5%)
Query: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS
Sbjct: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFAS 60
Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW
Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAW 120
Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEEC----RKEIEEREKKA 169
VWNTHADFADECPKPEL A A + + K C + ++ E E+ A
Sbjct: 121 VWNTHADFADECPKPELRV-----AAVALELQAKLSNCNGDPQWQLSENERLA 168
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 166 bits (420), Expect = 1e-41
Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
Query: 4 TKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASEN 62
T + + + D + + D+ + P FEP+V LP++ E+KT EEDEEE F RAK RF E+
Sbjct: 1149 TANKNHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVES 1208
Query: 63 DLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVW 122
EWKERG G+VK+L+HK G IRLLM+R++ LKICANHY +P M+L PNAGSDR++VW
Sbjct: 1209 K--EWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVW 1266
Query: 123 NTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAE 182
+ D+ADE PKPE LAIRF E A FK KFEE + ++ N A ++ +
Sbjct: 1267 HA-LDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQSILKAPGTNVAMASN-QAVRIVK 1324
Query: 183 KLEALSVKEDTKEDA 197
+ + K+ K DA
Sbjct: 1325 EPTSHDNKDICKSDA 1339
Score = 144 bits (362), Expect = 7e-35
Identities = 81/159 (50%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 9 EDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFASENDLPEWK 68
ED D S E N D FEPIVSLPE E+K+ EEDEE LFK RAK R+ + D+ +WK
Sbjct: 2895 EDEDGSDEEVVH-NEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRW--DRDVSQWK 2951
Query: 69 ERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADF 128
ERG GD+K+L H K R+LM+RD+ K+CANH T MELKP S+ A VW T +D+
Sbjct: 2952 ERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVW-TASDY 3010
Query: 129 ADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREK 167
AD K E LA+RF E A FK FEEC++ + + +K
Sbjct: 3011 ADGEAKVEQLAVRFKTKEVADCFKKTFEECQQNLMKLQK 3049
Score = 139 bits (350), Expect = 2e-33
Identities = 73/157 (46%), Positives = 109/157 (69%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASEND 63
D +D D TE++D+++ FEP+V +PE+ E+ T EEDE+ L+ R K RF +E
Sbjct: 1995 DFEKDDDAYKTEDSDDIH----FEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAE-- 2048
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LM+R++ LK+CANH+ T M LKP +GSDRAW+W
Sbjct: 2049 VSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMW- 2107
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 2108 LASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQR 2144
Score = 118 bits (296), Expect = 3e-27
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RAK R+ + D+ +WKE
Sbjct: 2294 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRY--DKDVGQWKE 2351
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++M+RD+ LK+CANH TP M L+ G++R W+W T DFA
Sbjct: 2352 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWLW-TACDFA 2410
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 2411 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 2469
Query: 187 LSVKEDTKE 195
++E T+E
Sbjct: 2470 AVLEETTRE 2478
>gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapiens]
Length = 1758
Score = 137 bits (345), Expect = 6e-33
Identities = 72/157 (45%), Positives = 108/157 (68%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASEND 63
D +D D TE++D+++ FEP+V +PE+ E+ T EE E+ L+ K RF +E
Sbjct: 1020 DFEKDDDAYKTEDSDDIH----FEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1073
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LMQR++ LK+CANH+ T M LKP +GSDRAW+W+
Sbjct: 1074 VSQWKERGLGNLKILKNEVNGKVRMLMQREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1133
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1134 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1169
Score = 120 bits (301), Expect = 8e-28
Identities = 73/189 (38%), Positives = 112/189 (59%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RA++ R+ + D+ +WKE
Sbjct: 1319 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEFYRY--DKDVGQWKE 1376
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R+LM+RD+ LK+CANH TP M L+ G++R WVW T DFA
Sbjct: 1377 RGIGDIKILQNYDNKHVRILMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1435
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1436 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1494
Query: 187 LSVKEDTKE 195
++E T+E
Sbjct: 1495 AVLEETTRE 1503
>gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8
[Homo sapiens]
Length = 1765
Score = 135 bits (339), Expect = 3e-32
Identities = 71/157 (45%), Positives = 108/157 (68%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASEND 63
D +D D TE++D+++ FEP+V +PE+ E+ T EE E+ L+ K RF +E
Sbjct: 1019 DFEKDDDAYKTEDSDDIH----FEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1072
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LM+R++ LK+CANH+ T M LKP +GSDRAW+W+
Sbjct: 1073 VRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1132
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1133 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1168
Score = 116 bits (290), Expect = 1e-26
Identities = 65/155 (41%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D + T E D Q FEP+V LP+ E+ + EE+E+ +F RA+ R+ + D+ +WKE
Sbjct: 1318 DEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY--DKDVGQWKE 1375
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++M+RD+ LK+CANH TP M L+ G++R WVW T DFA
Sbjct: 1376 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1434
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEE 164
D K E LA+RF + A FK F+E + E+
Sbjct: 1435 DGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 1469
>gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [Homo
sapiens]
Length = 1765
Score = 135 bits (339), Expect = 3e-32
Identities = 71/157 (45%), Positives = 108/157 (68%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASEND 63
D +D D TE++D+++ FEP+V +PE+ E+ T EE E+ L+ K RF +E
Sbjct: 1019 DFEKDDDAYKTEDSDDIH----FEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1072
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LM+R++ LK+CANH+ T M LKP +GSDRAW+W+
Sbjct: 1073 VRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1132
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1133 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1168
Score = 116 bits (291), Expect = 1e-26
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D + T E D Q FEP+V LP+ E+ + EE+E+ +F RA+ R+ + D+ +WKE
Sbjct: 1318 DEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY--DKDVGQWKE 1375
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++M+RD+ LK+CANH TP M L+ G++R WVW T DFA
Sbjct: 1376 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1434
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1435 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1493
Query: 187 LSVKEDTKE 195
++E T+E
Sbjct: 1494 AILEETTRE 1502
>gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapiens]
Length = 1765
Score = 135 bits (339), Expect = 3e-32
Identities = 71/157 (45%), Positives = 108/157 (68%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASEND 63
D +D D TE++D+++ FEP+V +PE+ E+ T EE E+ L+ K RF +E
Sbjct: 1019 DFEKDDDAYKTEDSDDIH----FEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE-- 1072
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G +R+LM+R++ LK+CANH+ T M LKP +GSDRAW+W+
Sbjct: 1073 VRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1132
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1133 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQR 1168
Score = 116 bits (291), Expect = 1e-26
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D + T E D Q FEP+V LP+ E+ + EE+E+ +F RA+ R+ + D+ +WKE
Sbjct: 1318 DEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY--DKDVGQWKE 1375
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++M+RD+ LK+CANH TP M L+ G++R WVW T DFA
Sbjct: 1376 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1434
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1435 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1493
Query: 187 LSVKEDTKE 195
++E T+E
Sbjct: 1494 AILEETTRE 1502
>gi|157266273 RANBP2-like and GRIP domain containing 1 [Homo sapiens]
Length = 1756
Score = 133 bits (335), Expect = 9e-32
Identities = 70/153 (45%), Positives = 104/153 (67%), Gaps = 8/153 (5%)
Query: 9 EDHDTSTENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEW 67
+D TE++D+++ FEP+V +PE+ E+ T EE E+ L+ K RF +E + +W
Sbjct: 1016 DDDACKTEDSDDIH----FEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE--ISQW 1069
Query: 68 KERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHAD 127
KERG G++K+LK++ G R+LM+RD+ LK+CANH+ T M LKP +GSDRAW+W +D
Sbjct: 1070 KERGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMW-LASD 1128
Query: 128 FADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
F+D K E LA +F E A++FK KFEEC++
Sbjct: 1129 FSDGDAKLERLAAQFKTPELAEEFKQKFEECQR 1161
Score = 118 bits (296), Expect = 3e-27
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RA+ R+ + D+ +WKE
Sbjct: 1311 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAELYRY--DKDVGQWKE 1368
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++M+RD+ LK+CANH TP M L+ G++R WVW T DFA
Sbjct: 1369 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 1427
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1428 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1486
Query: 187 LSVKEDTKE 195
++E T+E
Sbjct: 1487 AVLEETTRE 1495
>gi|118200331 RANBP2-like and GRIP domain containing 2 [Homo
sapiens]
Length = 1013
Score = 133 bits (335), Expect = 9e-32
Identities = 70/153 (45%), Positives = 104/153 (67%), Gaps = 8/153 (5%)
Query: 9 EDHDTSTENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEW 67
+D TE++D+++ FEP+V +PE+ E+ T EE E+ L+ K RF +E + +W
Sbjct: 273 DDDACKTEDSDDIH----FEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAE--ISQW 326
Query: 68 KERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHAD 127
KERG G++K+LK++ G R+LM+RD+ LK+CANH+ T M LKP +GSDRAW+W +D
Sbjct: 327 KERGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMW-LASD 385
Query: 128 FADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
F+D K E LA +F E A++FK KFEEC++
Sbjct: 386 FSDGDAKLERLAAQFKTPELAEEFKQKFEECQR 418
Score = 116 bits (290), Expect = 1e-26
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F A+ R+ + D+ +WKE
Sbjct: 568 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHMAELYRY--DKDVGQWKE 625
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++M+RD+ LK+CANH TP M L+ G++R WVW T DFA
Sbjct: 626 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVW-TACDFA 684
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 685 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 743
Query: 187 LSVKEDTKE 195
++E T+E
Sbjct: 744 AVLEETTRE 752
>gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo sapiens]
Length = 1758
Score = 130 bits (327), Expect = 8e-31
Identities = 70/157 (44%), Positives = 106/157 (67%), Gaps = 9/157 (5%)
Query: 6 DTHEDHDT-STENTDELNHDPQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASEND 63
D +D D TE++D+++ FEP+V +PE+ E+ EE E+ L+ K RF +E
Sbjct: 1020 DFEKDDDAYKTEDSDDIH----FEPVVQMPEKVELVIGEEGEKVLYSQGVKLFRFDAE-- 1073
Query: 64 LPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWN 123
+ +WKERG G++K+LK++ G R+LM+R++ LK+CANH+ T M LKP +GSDRAW+W+
Sbjct: 1074 VRQWKERGLGNLKILKNEVNGKPRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWS 1133
Query: 124 THADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160
+DF+D K E LA +F E A++FK KFEEC++
Sbjct: 1134 A-SDFSDGDAKLERLAAKFKTPELAEEFKQKFEECQQ 1169
Score = 118 bits (295), Expect = 4e-27
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 12 DTSTENTDELNHDPQ-FEPIVSLPEQ-EIKTLEEDEEELFKMRAKWLRFASENDLPEWKE 69
D ++ T E D Q FEP+V LP+ E+ + EE+E+ +F RA+ R+ + D+ +WKE
Sbjct: 1319 DEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEKVVFSHRAELYRY--DKDVGQWKE 1376
Query: 70 RGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFA 129
RG GD+K+L++ + +R++M+RD+ LK+CANH TP M L+ G++R WVW T DFA
Sbjct: 1377 RGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHTITPDMSLQNMKGTERVWVW-TACDFA 1435
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAG---SGKNDHAEKVAEKLEA 186
D K E LA+RF + A FK F+E K +E++ S + E K+
Sbjct: 1436 DGERKVEHLAVRFKLQDVADSFKKIFDEA-KTAQEKDSLITPHVSRSSTPRESPCGKIAV 1494
Query: 187 LSVKEDTKE 195
++E T+E
Sbjct: 1495 AVLEETTRE 1503
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 35.4 bits (80), Expect = 0.033
Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 35 EQEIKTLEEDEEELFKMRAKWLRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDK 94
E++I+ LEE E K+R + + E + E ++R + K+ + +EK R++
Sbjct: 343 EEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEK-------IREQ 395
Query: 95 TLKICANHYTTPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTK 154
KI M E + G +W + ++ E ++ + K
Sbjct: 396 EEKI--REQEEMMQEQEEKMGEQEEKMWEQEEEMQEQ-------------EEKMRRQEEK 440
Query: 155 FEECRKEIEEREKKAGSGK---NDHAEKVAEKLEALSVKEDTKEDAEEK 200
E K+I E+E+K + + EK+ E+ + +E ++ EEK
Sbjct: 441 IREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEK 489
Score = 28.5 bits (62), Expect = 4.0
Identities = 34/169 (20%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 35 EQEIKTLEEDEEELFKMRAKWLRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDK 94
EQE + ++E EE++ + K + E ++ E +E+ + ++ +EK ++ Q +K
Sbjct: 401 EQE-EMMQEQEEKMGEQEEKM--WEQEEEMQEQEEKMRRQEEKIREQEK---KIREQEEK 454
Query: 95 TLKICANHYTTPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTK 154
M E + G + A ++ E ++ + K
Sbjct: 455 I-----REQEEMMQEQEEKMGEQEGKMCEQEAKMQEQ-------------EEKMRRQEEK 496
Query: 155 FEECRKEIEEREKKAGSGKN---DHAEKVAEKLEALSVKEDTKEDAEEK 200
E K+I E+E+K + + EK+ E+ E + +E+ ++ EEK
Sbjct: 497 IREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEK 545
>gi|154426331 early undifferentiated retina and lens isoform 1 [Homo
sapiens]
Length = 297
Score = 35.4 bits (80), Expect = 0.033
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 16 ENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFASENDLPEWKERGTGDV 75
++ E + +PQ + E K L + + ++ K AKW+ S + +R
Sbjct: 107 DSDSECSKNPQHHLFNFRHKPEEKLLPQFDSQVPKYSAKWID-GSAGGISNCTQR----- 160
Query: 76 KLLKHKEKGAIRLLMQRDKTLKICAN-----HYTTPMMELKPNAGSDRAWVWNTHADFA- 129
+L+ +E L M +D +C N H + + S A V H ++
Sbjct: 161 -ILEQRENTDFGLSMLQDSGATLCRNSVLWPHSHNQAQKKEETISSPEANVQTQHPHYSR 219
Query: 130 DECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKA 169
+E L + LNA+ Q+ + FEE +++E++ A
Sbjct: 220 EELNSMTLGEVEQLNAKLLQQIQEVFEELTHQVQEKDSLA 259
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 33.9 bits (76), Expect = 0.096
Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 15/188 (7%)
Query: 20 ELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKWLRFASENDLPEWKERGTGDVKLLK 79
+L H Q E + LPEQ+ LE E++ ++ + + +LPE +E G ++L +
Sbjct: 172 QLKHPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQ-EGQLELPEQQE---GQLELPE 227
Query: 80 HKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRAWVWNTHADFADECPKPELLA 139
+E G + L Q++ L++ + +EL + H + E P+ ++
Sbjct: 228 QQE-GQLELPQQQEGQLEL--SEQQEGQLELSEQQEGQLKHL--EHQEGQLEVPEEQMGQ 282
Query: 140 IRFLNAENAQKFKTKFEECRKEIEEREK------KAGSGKNDHAEKVAEKLEALSVKEDT 193
+++L + Q +E + E+ E++ + G+ H E+ +LE L +E
Sbjct: 283 LKYLEQQEGQLKHLDQQEKQPELPEQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEEQEGQ 342
Query: 194 KEDAEEKQ 201
+ E+++
Sbjct: 343 LKHLEQQE 350
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 33.1 bits (74), Expect = 0.16
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 126 ADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLE 185
A+ + P PE A + + K K K E +KE ++ + K S K AEK E
Sbjct: 897 AEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS-------KPAEKKE 949
Query: 186 ALSVKEDTKEDAEEK 200
A K+DTKE+ +K
Sbjct: 950 AAPEKKDTKEEKAKK 964
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 32.7 bits (73), Expect = 0.21
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 146 ENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEKQ 201
E +K KTK E RKE EE EKK + E+ E+ E +E+ KE+ E+++
Sbjct: 39 EKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEE-EEREEEEEEEEEEKEEEEKEE 93
Score = 29.6 bits (65), Expect = 1.8
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 149 QKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTK----EDAEEKQ 201
+K +T+ E +E EE E+K G K EK EK + KE K E+ E+K+
Sbjct: 6 KKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKR 62
Score = 28.9 bits (63), Expect = 3.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 146 ENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEKQ 201
E K K K +E RKE E+++K + K E+ +K + K+ +E+ EE++
Sbjct: 24 EKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 32.7 bits (73), Expect = 0.21
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 42 EEDEEELFKMRAKWLRFASENDLPEWKERGTGDVKLLKHKE-KGAIRLLMQRDK---TLK 97
++ EE+ K++AK R + D P +K+ D K+ K KE K ++ M R K +K
Sbjct: 435 KQGEEKGTKVQAK--REKLQEDKPTFKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEVK 492
Query: 98 ICANHYTTPMMELKPNAGSDRAWVWNTHADFADECPKPE----LLAIRF----LNAENAQ 149
+ T ++ N S + A+ P+ E L +R +E +
Sbjct: 493 SQNGEFMTHKLKHTENTFSRPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFE 552
Query: 150 KFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEKQ 201
K K K +E E+EE +K K + KV E+ E +E+ E++
Sbjct: 553 KLKQKQQEAALELEELKK-----KREERRKVLEEEEQRRKQEEADRKLREEE 599
Score = 30.0 bits (66), Expect = 1.4
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 19/205 (9%)
Query: 5 KDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEED-----EEELFKMRAKWLRFA 59
+D E+ E +E P+ S+ E +++ + E+ +EE M K + +
Sbjct: 178 RDAEENKKEDKEKEEEEEEKPKRG---SIGENQVEVMVEEKTTESQEETVVMSLKNGQIS 234
Query: 60 SENDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGSDRA 119
SE E +ER G ++ H++ + ++ A E +RA
Sbjct: 235 SEEPKQE-EEREQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERA 293
Query: 120 WVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKN---DH 176
+ A E + E E ++ + + E R+ I+E EK+A + +
Sbjct: 294 RIEAEEKAAAQERERREAE-----ERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEE 348
Query: 177 AEKVAEKLEALSVKEDTKEDAEEKQ 201
++ AE E +KE+ K AEE+Q
Sbjct: 349 EKRAAE--ERQRIKEEEKRAAEERQ 371
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 32.3 bits (72), Expect = 0.28
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 133 PKPELLAIRFLNAENAQKFKTKFEECRKEIEE-REKKAGSGKNDHAEKVAEKLEALSVKE 191
PK +L+ QK K++ E KEIEE R K G D + + E+L+AL +++
Sbjct: 26 PKEDLIKFAKKQMMLIQKAKSRCTELEKEIEELRSKPVTEGTGDIIKALTERLDALLLEK 85
Query: 192 DTKE 195
E
Sbjct: 86 AETE 89
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 32.3 bits (72), Expect = 0.28
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 43 EDEEELFKMRAKWLRFASENDLPEWKERGTGDVKLLKHKE-KGAIRLLMQRDK---TLKI 98
+ EE+ K++AK R + D P +K+ D K+ K KE K ++ M R K +K
Sbjct: 201 QGEEKGTKVQAK--REKLQEDKPTFKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEVKS 258
Query: 99 CANHYTTPMMELKPNAGSDRAWVWNTHADFADECPKPE----LLAIRF----LNAENAQK 150
+ T ++ N S + A+ P+ E L +R +E +K
Sbjct: 259 QNGEFMTHKLKHTENTFSRPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFEK 318
Query: 151 FKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEKQ 201
K K +E E+EE +K K + KV E+ E +E+ E++
Sbjct: 319 LKQKQQEAALELEELKK-----KREERRKVLEEEEQRRKQEEADRKLREEE 364
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 32.3 bits (72), Expect = 0.28
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 43 EDEEELFKMRAKWLRFASENDLPEWKERGTGDVKLLKHKE-KGAIRLLMQRDK---TLKI 98
+ EE+ K++AK R + D P +K+ D K+ K KE K ++ M R K +K
Sbjct: 207 QGEEKGTKVQAK--REKLQEDKPTFKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEVKS 264
Query: 99 CANHYTTPMMELKPNAGSDRAWVWNTHADFADECPKPE----LLAIRF----LNAENAQK 150
+ T ++ N S + A+ P+ E L +R +E +K
Sbjct: 265 QNGEFMTHKLKHTENTFSRPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFEK 324
Query: 151 FKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEKQ 201
K K +E E+EE +K K + KV E+ E +E+ E++
Sbjct: 325 LKQKQQEAALELEELKK-----KREERRKVLEEEEQRRKQEEADRKLREEE 370
>gi|190194423 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 145 AENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEK 200
AE T R E EE EK+ D + AEK L KE++ E + E+
Sbjct: 32 AETVAPDNTAIPSLRAEAEENEKETAVSTEDDSHHKAEKSSVLKSKEESHEQSAEQ 87
>gi|190341024 SPARC-like 1 [Homo sapiens]
Length = 664
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 145 AENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEK 200
AE T R E EE EK+ D + AEK L KE++ E + E+
Sbjct: 32 AETVAPDNTAIPSLRAEAEENEKETAVSTEDDSHHKAEKSSVLKSKEESHEQSAEQ 87
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 32.0 bits (71), Expect = 0.36
Identities = 40/204 (19%), Positives = 75/204 (36%), Gaps = 8/204 (3%)
Query: 1 MAATKDTHEDHDTSTENTDELNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAK-WLRFA 59
M K E + + +++ + + +E +T+ E EE++ K W +
Sbjct: 426 MREEKKMQEQEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEE 485
Query: 60 SE---NDLPEWKERGTGDVKLLKHKEKGAIRLLMQRDKTLKICANHYTTPMMELKPNAGS 116
E LPE KE+ K+ + +EK + Q +K M +
Sbjct: 486 KEWQQQRLPEQKEKLWEQEKMQEQEEK----IWEQEEKIRDQEEMWGQEKKMWRQEKMRE 541
Query: 117 DRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDH 176
+W D+ K R Q+ KT +E + EER ++ +
Sbjct: 542 QEDQMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREE 601
Query: 177 AEKVAEKLEALSVKEDTKEDAEEK 200
E + E+ E + +E+ ++ EEK
Sbjct: 602 EEMMREQEEKMQEQEEKMQEQEEK 625
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 31.6 bits (70), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 156 EECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEKQ 201
EE R+E + RE+K GK E+ E+ E +E+ +E+ EE++
Sbjct: 74 EEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEE 119
Score = 28.1 bits (61), Expect = 5.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 134 KPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGK---NDHAEKVAEKLEALSVK 190
K E +R A + + + EE R+E + RE+K K EK EK E +
Sbjct: 47 KEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106
Query: 191 EDTKEDAEEKQ 201
E+ +E+ EE++
Sbjct: 107 EEEEEEEEEEE 117
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 5 KDTHEDHDTSTEN---TDELNHDPQFEPIVSLPEQEIKTLEE 43
KDTHE H S N T E + F VS+PE++++ EE
Sbjct: 1427 KDTHEKHLMSQRNSGETTETSDGMNFTKYVSVPEKDLEKTEE 1468
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 31.2 bits (69), Expect = 0.62
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 134 KPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVKEDT 193
K ELL +R E ++ K E ++E+E+ AG D + K E L +E+
Sbjct: 586 KQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAG----DTRQVEVLKKELLRTQEEL 641
Query: 194 KEDAEEKQ 201
KE E+Q
Sbjct: 642 KELQAERQ 649
>gi|24307965 UBX domain containing 2 [Homo sapiens]
Length = 508
Score = 30.8 bits (68), Expect = 0.81
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 149 QKFKTKFEECRKEIEERE-------KKAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEK 200
+K + + EE RKE E+RE +K G D+ K E+L ++E +E AE++
Sbjct: 204 KKLEERREEKRKEEEQREIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERNREKAEDR 262
>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
sapiens]
Length = 783
Score = 30.8 bits (68), Expect = 0.81
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 143 LNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEALSVK-EDTKEDAEEKQ 201
L ++ A K K E RK+ EE+EKK K+D E++AE+ E + K + K+ AE +
Sbjct: 11 LESDTAMK---KGETLRKQTEEKEKKE-KPKSDKTEEIAEEEETVFPKAKQVKKKAEPSE 66
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 30.4 bits (67), Expect = 1.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 145 AENAQKFKTKFEECRKEIEEREK--KAGSGKNDHAEKVAEKLEALSVKEDTKEDAEEK 200
+ A+ FE+ R+ E+E+ KA + +HAEK E+L ++ EDA E+
Sbjct: 1214 SSTAKSSSDSFEQFRRAAREKEEREKALKAQAEHAEKEKERLRQERMRSREDEDALEQ 1271
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,366,666
Number of Sequences: 37866
Number of extensions: 399870
Number of successful extensions: 2356
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 2047
Number of HSP's gapped (non-prelim): 386
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.