Guide to the Human Genome
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Name: C21orf91 Sequence: fasta or formatted (297aa) NCBI GI: 154426331
Description:

early undifferentiated retina and lens isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {221aa} early undifferentiated retina and lens isoform 3
alt prot {296aa} early undifferentiated retina and lens isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         10           1
 C cysteine            3.7         11           1
 D aspartate           4.7         14           2
 E glutamate           8.8         26           3
 F phenylalanine       3.0          9           1
 G glycine             4.0         12           2
 H histidine           5.1         15           2
 I isoleucine          5.1         15           1
 K lysine              8.1         24           2
 L leucine            10.8         32           2
 M methionine          1.3          4           1
 N asparagine          6.7         20           2
 P proline             3.7         11           1
 Q glutamine           7.7         23           2
 R arginine            3.0          9           1
 S serine              9.1         27           2
 T threonine           4.4         13           1
 V valine              4.7         14           1
 W tryptophan          1.0          3           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   early undifferentiated retina and lens isoform 1 [H... 
C21orf91              0.990   early undifferentiated retina and lens isoform 2 [H...
C21orf91              0.748   early undifferentiated retina and lens isoform 3 [H...
CENPE                 0.020   centromere protein E 
LOC389842             0.017   PREDICTED: similar to RAN binding protein 1 
LOC389842             0.017   PREDICTED: similar to RAN binding protein 1 
C1orf71               0.017   hypothetical protein LOC163882 isoform 2 
C1orf71               0.017   hypothetical protein LOC163882 isoform 1 
CCDC110               0.015   coiled-coil domain containing 110 isoform b 
CCDC110               0.015   coiled-coil domain containing 110 isoform a 
SCHIP1                0.014   schwannomin interacting protein 1 
ELMOD3                0.012   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.012   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.012   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.012   ELMO/CED-12 domain containing 3 isoform a 
RANBP1                0.012   RAN binding protein 1 
RAI14                 0.012   retinoic acid induced 14 isoform d 
RAI14                 0.012   retinoic acid induced 14 isoform c 
RAI14                 0.012   retinoic acid induced 14 isoform b 
RAI14                 0.012   retinoic acid induced 14 isoform a 
RAI14                 0.012   retinoic acid induced 14 isoform a 
RAI14                 0.012   retinoic acid induced 14 isoform a 
KIF7                  0.012   kinesin family member 7 
CCDC21                0.012   coiled-coil domain containing 21 
ROCK1                 0.010   Rho-associated, coiled-coil containing protein kinase...
GRIPAP1               0.010   GRIP1 associated protein 1 isoform 2 
GRIPAP1               0.010   GRIP1 associated protein 1 isoform 1 
CEP97                 0.010   centrosomal protein 97kDa 
EPS15                 0.009   epidermal growth factor receptor pathway substrate ...
EPS15                 0.009   epidermal growth factor receptor pathway substrate 15...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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