LOC389842 9116

Name: LOC389842	Sequence: fasta or formatted (201aa)		NCBI GI: 169216167
Description: PREDICTED: similar to RAN binding protein 1		Referenced in: Ran and Rag
Other entries for this name: alt mRNA [201aa] PREDICTED: similar to RAN binding protein 1 alt prot [178aa] PREDICTED: similar to RAN binding protein 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 18 2 C cysteine 1.5 3 1 D aspartate 7.5 15 1 E glutamate 15.9 32 3 F phenylalanine 3.5 7 1 G glycine 3.0 6 1 H histidine 3.5 7 1 I isoleucine 3.0 6 1 K lysine 12.4 25 2 L leucine 8.5 17 2 M methionine 2.5 5 2 N asparagine 4.5 9 1 P proline 4.0 8 1 Q glutamine 2.5 5 1 R arginine 4.5 9 1 S serine 3.0 6 1 T threonine 6.5 13 2 V valine 2.5 5 1 W tryptophan 2.0 4 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to RAN binding protein 1 LOC389842 1.000 PREDICTED: similar to RAN binding protein 1 RANBP1 0.959 RAN binding protein 1 LOC389842 0.684 PREDICTED: similar to RAN binding protein 1 RANBP2 0.362 RAN binding protein 2 RGPD3 0.288 RANBP2-like and GRIP domain containing 3 RGPD8 0.283 PREDICTED: RANBP2-like and GRIP domain containing 8... RGPD5 0.283 RANBP2-like and GRIP domain containing 5 isoform 1 [... RGPD6 0.283 RANBP2-like and GRIP domain containing 6 RGPD1 0.278 RANBP2-like and GRIP domain containing 1 RGPD2 0.278 RANBP2-like and GRIP domain containing 2 RGPD4 0.270 RANBP2-like and GRIP domain containing 4 LOC645202 0.026 PREDICTED: hypothetical protein LOC645202 C21orf91 0.026 early undifferentiated retina and lens isoform 1 [H... IVL 0.023 involucrin NEFH 0.021 neurofilament, heavy polypeptide 200kDa LOC100294088 0.021 PREDICTED: hypothetical protein, partial CALD1 0.021 caldesmon 1 isoform 1 GCC2 0.018 GRIP and coiled-coil domain-containing 2 CALD1 0.018 caldesmon 1 isoform 4 CALD1 0.018 caldesmon 1 isoform 3 SPARCL1 0.018 SPARC-like 1 SPARCL1 0.018 SPARC-like 1 LOC283685 0.018 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC100289089 0.018 PREDICTED: hypothetical protein XP_002343359 PRUNE2 0.015 prune homolog 2 CGN 0.015 cingulin UBXN4 0.015 UBX domain containing 2 DDX21 0.015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 BRD4 0.013 bromodomain-containing protein 4 isoform long Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.