RGPD1 6108

Name: RGPD1	Sequence: fasta or formatted (1756aa)		NCBI GI: 157266273
Description: RANBP2-like and GRIP domain containing 1		Referenced in: Ran and Rag
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 116 2 C cysteine 1.5 26 1 D aspartate 5.6 98 3 E glutamate 8.7 153 3 F phenylalanine 3.9 69 1 G glycine 5.4 95 2 H histidine 2.2 38 2 I isoleucine 3.6 64 2 K lysine 8.3 145 3 L leucine 10.2 179 3 M methionine 1.5 26 2 N asparagine 4.3 76 2 P proline 4.4 78 2 Q glutamine 4.6 80 2 R arginine 4.4 78 2 S serine 9.9 173 4 T threonine 4.9 86 3 V valine 5.9 104 2 W tryptophan 1.4 25 2 Y tyrosine 2.7 47 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RANBP2-like and GRIP domain containing 1 RGPD4 0.948 RANBP2-like and GRIP domain containing 4 RGPD3 0.943 RANBP2-like and GRIP domain containing 3 RGPD5 0.931 RANBP2-like and GRIP domain containing 5 isoform 1 [... RGPD6 0.931 RANBP2-like and GRIP domain containing 6 RGPD8 0.930 PREDICTED: RANBP2-like and GRIP domain containing 8... RGPD2 0.569 RANBP2-like and GRIP domain containing 2 RANBP2 0.477 RAN binding protein 2 RGPD5 0.453 RANBP2-like and GRIP domain containing 5 isoform 2 [... RGPD7 0.453 RANBP2-like and GRIP domain containing 7 GCC2 0.053 GRIP and coiled-coil domain-containing 2 RANBP1 0.033 RAN binding protein 1 LOC389842 0.031 PREDICTED: similar to RAN binding protein 1 LOC389842 0.031 PREDICTED: similar to RAN binding protein 1 RGPD8 0.030 PREDICTED: RANBP2-like and GRIP domain containing 8... LOC389842 0.025 PREDICTED: similar to RAN binding protein 1 RANBP3L 0.008 RAN binding protein 3-like isoform 1 RANBP3L 0.008 RAN binding protein 3-like isoform 2 GCC1 0.007 Golgi coiled-coil protein 1 RANBP3 0.006 RAN binding protein 3 isoform RANBP3-b RANBP3 0.006 RAN binding protein 3 isoform RANBP3-a RANBP3 0.006 RAN binding protein 3 isoform RANBP3-d C3orf77 0.005 hypothetical protein LOC375337 TEX9 0.005 testis expressed 9 TTC21B 0.004 tetratricopeptide repeat domain 21B DSPP 0.004 dentin sialophosphoprotein preproprotein CDKN2AIP 0.004 CDKN2A interacting protein PEX5 0.004 peroxisomal biogenesis factor 5 isoform d PEX5 0.004 peroxisomal biogenesis factor 5 isoform d PEX5 0.004 peroxisomal biogenesis factor 5 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.