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Search of human proteins with 111548657
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|111548657 hypothetical protein LOC345222 isoform b [Homo
sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|111548657 hypothetical protein LOC345222 isoform b [Homo sapi... 547 e-156
gi|111548660 hypothetical protein LOC345222 isoform a [Homo sapi... 496 e-141
gi|109715825 zinc finger protein 690 [Homo sapiens] 42 7e-04
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 38 0.011
gi|4506049 hematopoietically expressed homeobox [Homo sapiens] 35 0.052
gi|191252816 extracellular leucine-rich repeat and fibronectin t... 34 0.12
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [... 34 0.12
gi|14149742 coiled-coil transcriptional coactivator isoform 1 [H... 34 0.12
gi|171906567 peripheral benzodiazepine receptor-associated prote... 34 0.12
gi|171906559 peripheral benzodiazepine receptor-associated prote... 34 0.12
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 34 0.15
gi|32129212 zinc finger protein 434 [Homo sapiens] 34 0.15
gi|56682953 epidermal growth factor receptor pathway substrate 8... 33 0.20
gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming ... 32 0.44
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 32 0.58
gi|55750053 atrophin-1 [Homo sapiens] 32 0.58
gi|55750041 atrophin-1 [Homo sapiens] 32 0.58
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 32 0.58
gi|4505807 phosphatidylinositol 4-kinase type 3 alpha isoform 1 ... 32 0.76
gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform ... 32 0.76
gi|239757890 PREDICTED: similar to family with sequence similari... 32 0.76
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 32 0.76
gi|157388933 hypothetical protein LOC55026 isoform 2 [Homo sapiens] 32 0.76
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] 32 0.76
gi|61966703 NHS-like 2 [Homo sapiens] 32 0.76
gi|157388935 hypothetical protein LOC55026 isoform 3 [Homo sapiens] 32 0.76
gi|157388931 hypothetical protein LOC55026 isoform 1 [Homo sapiens] 32 0.76
gi|148236531 hypothetical protein LOC339779 [Homo sapiens] 32 0.76
gi|171906606 zinc finger with KRAB and SCAN domains 2 [Homo sapi... 31 0.99
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 31 1.3
>gi|111548657 hypothetical protein LOC345222 isoform b [Homo
sapiens]
Length = 267
Score = 547 bits (1410), Expect = e-156
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE
Sbjct: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
Query: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP
Sbjct: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
Query: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG
Sbjct: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
Query: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET
Sbjct: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
Query: 241 CREISRCYSTVCRRGCPVAMEWLWTLS 267
CREISRCYSTVCRRGCPVAMEWLWTLS
Sbjct: 241 CREISRCYSTVCRRGCPVAMEWLWTLS 267
>gi|111548660 hypothetical protein LOC345222 isoform a [Homo
sapiens]
Length = 278
Score = 496 bits (1277), Expect = e-141
Identities = 244/246 (99%), Positives = 245/246 (99%)
Query: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE
Sbjct: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
Query: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP
Sbjct: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
Query: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG
Sbjct: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
Query: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET
Sbjct: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
Query: 241 CREISR 246
CRE+ R
Sbjct: 241 CREVRR 246
>gi|109715825 zinc finger protein 690 [Homo sapiens]
Length = 852
Score = 41.6 bits (96), Expect = 7e-04
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 45 NWTDAEMRGLMLVWEE--FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNM 102
+W E + + + E F++ L+ RN+++Y +A +L+E G R E+ + K ++
Sbjct: 410 HWGYEETKTYLAILSETQFYEALRNCHRNSQLYGAVAERLWEY-GFLRTPEQCRTKFKSL 468
Query: 103 TFQYRKLKCMTDSESAPPDWPYYLAIDGILA---KVPESCDGKLPDSQPPGPSTSQTEA 158
YRK+K + AP P++ +D +++ P + DG+ + P TS+ EA
Sbjct: 469 QTSYRKVK----NGQAPETCPFFEEMDALVSVRVAAPPN-DGQEETASCPVQGTSEAEA 522
Score = 37.0 bits (84), Expect = 0.018
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 45 NWTDAEMRGLMLVWE--EFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNM 102
+W E R L+ + EF++ L+ RN++VY +A +L E G R E+ + K +
Sbjct: 247 HWGYEETRTLLAILSQTEFYEALRNCHRNSQVYGAVAERLREY-GFLRTLEQCRTKFKGL 305
Query: 103 TFQYRKLKCMTDSESAP 119
YRK+K E+ P
Sbjct: 306 QKSYRKVKSGHPPETCP 322
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 37.7 bits (86), Expect = 0.011
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Query: 109 LKCMTDSESAPPDWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTP 168
L+ +S +PP+ P + ++ P S L S P S T +SLS + +P
Sbjct: 791 LQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSKSSPESP 850
Query: 169 LYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQS-CHLQKKQLRLLEAMV 227
L P S SSS+ LS PV + S L+ L E+++
Sbjct: 851 LQSPV------------ISFSSSTSLSPFSEESSSPVDEYTSSSDTLLESDSLTDSESLI 898
Query: 228 EEQRRLSRAVEETCREISR 246
E + + ++E E++R
Sbjct: 899 ESEPLFTYTLDEKVDELAR 917
>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
Length = 270
Score = 35.4 bits (80), Expect = 0.052
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 7 PGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMR----GLMLVWEEFF 62
P P A SH + A+ +AAA GPG P R ++T A +R G L+W F
Sbjct: 72 PTPIHPAFSHHSAAA-LAAAYGPGGFGGPLYPFPRTVNDYTHALLRHDPLGKPLLWSPFL 130
Query: 63 DELKQTKRNAKV----------YEKMASKLFEMTGERR-------LGE-EIKIKITNMTF 104
++ +V +K ++ + ER+ L E ++K N
Sbjct: 131 QRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRA 190
Query: 105 QYRKLKCMTDSESAPPDWPYYLAIDGILAKVPESCDGK--LPDSQPPGPSTSQTEASLSP 162
++R+LK + + L + SCD + LP Q G S ++ S SP
Sbjct: 191 KWRRLKQENPQSNKKEE----------LESLDSSCDQRQDLPSEQNKGASLDSSQCSPSP 240
Query: 163 PAK 165
++
Sbjct: 241 ASQ 243
>gi|191252816 extracellular leucine-rich repeat and fibronectin type
III domain containing 1 [Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.12
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Query: 100 TNMTFQYRKLKCMTDSESAPPDWPYYLAIDG------ILAKVPESCDGKLPDSQ---PPG 150
TN T Y +++C ES P YYL G IL+K+ C ++ PP
Sbjct: 209 TNATQTYDRMQC----ESPPVYSGYYLLGQGRRGHRSILSKLQSVCTEDSYAAEVVGPPR 264
Query: 151 PSTSQTEASLSPPAKSTPLYFPYNQ-CSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRK 209
P++ +++ SPP P P + C+ + F D + +L +L ++E RP+ K K
Sbjct: 265 PASGRSQPGRSPPPPPPP--EPSDMPCADDECFSGDGTTPLVALPTLATQAEARPLIKVK 322
>gi|219521893 coiled-coil transcriptional coactivator isoform 2
[Homo sapiens]
Length = 606
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 17/143 (11%)
Query: 50 EMRGLMLVWEEFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKL 109
E+R + V ++ ++L++ K+ Y + E + + E+ +
Sbjct: 389 ELRSALRVLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWNEDATTEDEEAAVGLSCP 448
Query: 110 KCMTDSESAPPDW----PYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAK 165
+TDSE P+ PY L C+ P S P GP + +S PA
Sbjct: 449 AALTDSEDESPEDMRLPPYGL------------CERGDPGSSPAGPREASPLVVISQPAP 496
Query: 166 STP-LYFPYNQCSYEGRFEDDRS 187
+P L P S + ED++S
Sbjct: 497 ISPHLSGPAEDSSSDSEAEDEKS 519
>gi|14149742 coiled-coil transcriptional coactivator isoform 1 [Homo
sapiens]
Length = 691
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 17/143 (11%)
Query: 50 EMRGLMLVWEEFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKL 109
E+R + V ++ ++L++ K+ Y + E + + E+ +
Sbjct: 474 ELRSALRVLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWNEDATTEDEEAAVGLSCP 533
Query: 110 KCMTDSESAPPDW----PYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAK 165
+TDSE P+ PY L C+ P S P GP + +S PA
Sbjct: 534 AALTDSEDESPEDMRLPPYGL------------CERGDPGSSPAGPREASPLVVISQPAP 581
Query: 166 STP-LYFPYNQCSYEGRFEDDRS 187
+P L P S + ED++S
Sbjct: 582 ISPHLSGPAEDSSSDSEAEDEKS 604
>gi|171906567 peripheral benzodiazepine receptor-associated protein
1 isoform b [Homo sapiens]
Length = 1797
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 143 LPDSQPPGPSTSQTEASLSP--PAKSTP------LYFPYNQCSYEGRFEDDRSDSSSSLL 194
LP S PPGP+ + +P P ++TP L + E R + S+ S
Sbjct: 230 LPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQLESELSKKRK 289
Query: 195 SLKFRSEERPVKKRKVQSCHLQKKQLRLLEA-MVEEQRRLS-RAVEE 239
+ +E K+R+ + LQ +Q + A +VEE RLS RA E+
Sbjct: 290 KCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEK 336
>gi|171906559 peripheral benzodiazepine receptor-associated protein
1 isoform a [Homo sapiens]
Length = 1857
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 143 LPDSQPPGPSTSQTEASLSP--PAKSTP------LYFPYNQCSYEGRFEDDRSDSSSSLL 194
LP S PPGP+ + +P P ++TP L + E R + S+ S
Sbjct: 290 LPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQLESELSKKRK 349
Query: 195 SLKFRSEERPVKKRKVQSCHLQKKQLRLLEA-MVEEQRRLS-RAVEE 239
+ +E K+R+ + LQ +Q + A +VEE RLS RA E+
Sbjct: 350 KCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEK 396
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 33.9 bits (76), Expect = 0.15
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 118 APPDWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCS 177
AP + P +A + L P DG P S P PS + A++SP + P P ++
Sbjct: 1001 APRETPSEMATNS-LPNGPALADGPAPVS-PLEPSPEKV-ATISPRRHAMPGSRPRSRIP 1057
Query: 178 YEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLL--------EAMVEE 229
ED S+ S SL S K R +R ++ + ++K+Q RLL + EE
Sbjct: 1058 VLLSEEDTGSEPSGSL-SAKERWSKRARPQQDLARLVMEKRQGRLLLRLASGASSSSSEE 1116
Query: 230 QRRLSRAVEETCRE 243
QRR S + T E
Sbjct: 1117 QRRASETLSGTGSE 1130
>gi|32129212 zinc finger protein 434 [Homo sapiens]
Length = 485
Score = 33.9 bits (76), Expect = 0.15
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 46 WTDAEMRGLMLVWE--EFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMT 103
W E + L+ + +F+ +L+ ++N+++Y MA L+E G R E+ + K ++
Sbjct: 44 WGYEETKTLLAILSSSQFYGKLQTCQQNSQIYRAMAEGLWEQ-GFLRTPEQCRTKFKSLQ 102
Query: 104 FQYRKLK 110
YRK++
Sbjct: 103 LSYRKVR 109
>gi|56682953 epidermal growth factor receptor pathway substrate 8
[Homo sapiens]
Length = 822
Score = 33.5 bits (75), Expect = 0.20
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 141 GKLPDSQPPGPSTSQTEASLSPPAK-STPLYFPYNQCSYE-GRFEDDRSDSSSSLLSLKF 198
G P PP PS T A + P STP P ++ R SDS S++
Sbjct: 614 GPRPADTPPAPSPPPTPAPVPVPLPPSTPAPVPVSKVPANITRQNSSSSDSGGSIVRDSQ 673
Query: 199 RSEERPVKKRKVQSCHLQKKQLRLL 223
R ++ PV +RK Q +Q + + L
Sbjct: 674 RHKQLPVDRRKSQMEEVQDELIHRL 698
>gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming
sequence [Homo sapiens]
Length = 906
Score = 32.3 bits (72), Expect = 0.44
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 119 PPDWPYYLAIDGILAKVPESCD-GKLP--DSQPPGPSTSQTEASLSPPAKSTPLYFPYNQ 175
PPD PY + + + P C G P D PP PS+ ++ L P P+ P +
Sbjct: 547 PPDRPYSVGAESRPQRRPLPCTPGDCPSRDKLPPVPSSRLGDSWLPRPIPKVPVSAPSSS 606
Query: 176 CSYEGRFEDDRSDSSSSLLSLKFRSEERP 204
+ GR + ++ S SL + E RP
Sbjct: 607 DPWTGR---ELTNRHSLPFSLPSQMEPRP 632
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 32.0 bits (71), Expect = 0.58
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 127 AIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEGRFEDDR 186
A+ G L + P++C +PPGP S T + +SP A PY+Q R + D
Sbjct: 2260 ALPGPLVRPPDTCS---QTPRPPGPGLSDTFSRVSPSAARD----PYDQSPMTPRSQSDS 2312
Query: 187 SDSSSS 192
+S +
Sbjct: 2313 FGTSQT 2318
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 32.0 bits (71), Expect = 0.58
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 141 GKLPDSQPPGPSTSQTEASLSPPAKSTP---LYFPYNQCSYEGRFEDDRSDSSSSLLS 195
G LP GP+ + + SL P + S P + FPY+ S S SSSS S
Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSAS 397
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 32.0 bits (71), Expect = 0.58
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 141 GKLPDSQPPGPSTSQTEASLSPPAKSTP---LYFPYNQCSYEGRFEDDRSDSSSSLLS 195
G LP GP+ + + SL P + S P + FPY+ S S SSSS S
Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSAS 397
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo
sapiens]
Length = 2161
Score = 32.0 bits (71), Expect = 0.58
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 100 TNMTFQYRKLKCMTDSESAPPDWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEAS 159
T +T L+ +D+ A PDW + A + P G SQP P+T + +
Sbjct: 426 TGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGAPGPTSGSQGQSQPSAPTTKLSSGT 485
Query: 160 L 160
L
Sbjct: 486 L 486
>gi|4505807 phosphatidylinositol 4-kinase type 3 alpha isoform 1
[Homo sapiens]
Length = 854
Score = 31.6 bits (70), Expect = 0.76
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 83 FEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPPD 121
F GE+RL E+I I I T + K +T S+ PPD
Sbjct: 144 FPTQGEKRLREDISIMIKFWTAMFSDKKYLTASQLVPPD 182
>gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform 2
[Homo sapiens]
Length = 2044
Score = 31.6 bits (70), Expect = 0.76
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 83 FEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPPD 121
F GE+RL E+I I I T + K +T S+ PPD
Sbjct: 1334 FPTQGEKRLREDISIMIKFWTAMFSDKKYLTASQLVPPD 1372
>gi|239757890 PREDICTED: similar to family with sequence similarity
70, member A [Homo sapiens]
Length = 377
Score = 31.6 bits (70), Expect = 0.76
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 118 APPDWPYYLAID----GILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPY 173
+PP P Y A D G+ P S G + Q PS S +S +PP S P Y P+
Sbjct: 260 SPPHLPPYSAYDFQHSGVFPSSPPS--GLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPF 317
Query: 174 NQ 175
+
Sbjct: 318 EK 319
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 31.6 bits (70), Expect = 0.76
Identities = 31/119 (26%), Positives = 42/119 (35%), Gaps = 11/119 (9%)
Query: 136 PESCDGKL---PDSQPPGPSTSQTEASL------SPPAKSTPLYFPYNQCSYEGRFEDDR 186
P DGK P+S+PP P T+ E S PPA PL P+ + D
Sbjct: 370 PPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDY 429
Query: 187 SDSSSSLLSLKFRSEERPV--KKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCRE 243
D +E ++RK S + R EE+RR+ C E
Sbjct: 430 PDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAE 488
>gi|157388933 hypothetical protein LOC55026 isoform 2 [Homo sapiens]
Length = 325
Score = 31.6 bits (70), Expect = 0.76
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 118 APPDWPYYLAID----GILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPY 173
+PP P Y A D G+ P S G + Q PS S +S +PP S P Y P+
Sbjct: 260 SPPHLPPYSAYDFQHSGVFPSSPPS--GLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPF 317
Query: 174 NQ 175
+
Sbjct: 318 EK 319
>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
Length = 1445
Score = 31.6 bits (70), Expect = 0.76
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 108 KLKCMTDSESAPPDWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAK-- 165
+++ + APP P+++A P+ P SQPP + QT+A LSPP
Sbjct: 483 EVEASSQLSQAPPQ-PHHMA-------QPQHFTPAWPQSQPPPLAEIQTQAHLSPPVPSL 534
Query: 166 --STPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQ 219
S+P SY E +S + L++ ++RP KR + S L+K Q
Sbjct: 535 GCSSPPQIRGCGASYPTSQERTQSVIPTGKEYLEWPLKKRPKWKRVLPSL-LKKSQ 589
>gi|61966703 NHS-like 2 [Homo sapiens]
Length = 709
Score = 31.6 bits (70), Expect = 0.76
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 144 PDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEER 203
PD + PG ST+ + +P A S+ +F Q +G ED+ + +S+E
Sbjct: 567 PDGRSPGESTAPSSLVFTPFASSSDAFFSGTQQPPQGSVEDEGPKVRVLPERISLQSQEE 626
Query: 204 PVKKR 208
KK+
Sbjct: 627 AEKKK 631
>gi|157388935 hypothetical protein LOC55026 isoform 3 [Homo sapiens]
Length = 241
Score = 31.6 bits (70), Expect = 0.76
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 118 APPDWPYYLAID----GILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPY 173
+PP P Y A D G+ P S G + Q PS S +S +PP S P Y P+
Sbjct: 176 SPPHLPPYSAYDFQHSGVFPSSPPS--GLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPF 233
Query: 174 NQ 175
+
Sbjct: 234 EK 235
>gi|157388931 hypothetical protein LOC55026 isoform 1 [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 0.76
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 118 APPDWPYYLAID----GILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPY 173
+PP P Y A D G+ P S G + Q PS S +S +PP S P Y P+
Sbjct: 284 SPPHLPPYSAYDFQHSGVFPSSPPS--GLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPF 341
Query: 174 NQ 175
+
Sbjct: 342 EK 343
>gi|148236531 hypothetical protein LOC339779 [Homo sapiens]
Length = 412
Score = 31.6 bits (70), Expect = 0.76
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 120 PDWPYYLAIDGILAKV-PESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSY 178
P W + +D + P S LP SQPP ST S PPA +P F + C
Sbjct: 20 PTWGFSQLVDSSPHNLQPLSPHQGLPPSQPPFSSTQSRRPSSPPPASPSP-GFQFGSCDS 78
Query: 179 EGRF 182
F
Sbjct: 79 NSDF 82
>gi|171906606 zinc finger with KRAB and SCAN domains 2 [Homo
sapiens]
Length = 967
Score = 31.2 bits (69), Expect = 0.99
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 45 NWTDAEMRGLMLVWEE--FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNM 102
+W+ E + + + +E F++ L+ RN++VY +A L E G R E+ + K ++
Sbjct: 342 HWSYEETKTFLAILKESRFYETLQACPRNSQVYGAVAEWLRE-CGFLRTPEQCRTKFKSL 400
Query: 103 TFQYRKLK 110
YRK++
Sbjct: 401 QKSYRKVR 408
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 30.8 bits (68), Expect = 1.3
Identities = 49/246 (19%), Positives = 96/246 (39%), Gaps = 37/246 (15%)
Query: 10 SLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEEFFDELKQTK 69
SLSA S + S A + P + + Q KH R NW W E
Sbjct: 517 SLSASSTSSHGSSAAQKQNPSH--TDQHTKHWRTDNWKTISSP----AWSEV-------- 562
Query: 70 RNAKVYEKMASKLFEMTGERRLGEEIK-IKITNMTFQYRKLKCMTDSESAPPDWPYYLAI 128
+ + + ++L + G ++ +K ++RK +++ +S P+ +
Sbjct: 563 --SSLSDSTRTRLTSESDYSSEGSSVESLKPVRKRQEHRKRASLSEKKS-----PFLSSA 615
Query: 129 DGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEGRFEDDRSD 188
+G + K+ + +GK+ E ++ L S+ +ED +
Sbjct: 616 EGAVPKLDK--EGKVVKKHKTKHKHKNKEKGQCSISQELKLK------SFTYEYEDSKQK 667
Query: 189 SSSSLLSLKFRSEERPVKKRKVQSCH------LQKKQLRLLEAMVEEQRRLSRAVEETCR 242
S ++L S E +K K H L K +L E + ++++ L R +++T +
Sbjct: 668 SDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKDEKSLKR-IKDTNK 726
Query: 243 EISRCY 248
+ISR +
Sbjct: 727 DISRSF 732
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,671,512
Number of Sequences: 37866
Number of extensions: 555066
Number of successful extensions: 3665
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 3580
Number of HSP's gapped (non-prelim): 146
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.