Guide to the Human Genome
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Name: ZNF434 Sequence: fasta or formatted (485aa) NCBI GI: 32129212
Description:

zinc finger protein 434

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         26           1
 C cysteine            4.5         22           1
 D aspartate           2.9         14           2
 E glutamate           8.5         41           2
 F phenylalanine       3.5         17           1
 G glycine             7.2         35           1
 H histidine           4.5         22           1
 I isoleucine          2.5         12           1
 K lysine              7.2         35           2
 L leucine             6.4         31           2
 M methionine          1.4          7           1
 N asparagine          3.9         19           2
 P proline             4.9         24           2
 Q glutamine           6.4         31           2
 R arginine            7.6         37           2
 S serine             10.1         49           3
 T threonine           5.2         25           1
 V valine              4.1         20           1
 W tryptophan          1.2          6           1
 Y tyrosine            2.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 434 
ZSCAN29               0.399   zinc finger protein 690 
ZKSCAN2               0.354   zinc finger with KRAB and SCAN domains 2 
ZSCAN20               0.278   zinc finger protein 31 
ZFP2                  0.217   zinc finger protein 2 homolog 
ZNF71                 0.215   zinc finger protein 71 
ZNF436                0.215   zinc finger protein 436 
ZNF436                0.215   zinc finger protein 436 
ZNF135                0.214   zinc finger protein 135 
ZNF160                0.212   zinc finger protein 160 
ZNF160                0.212   zinc finger protein 160 
ZNF160                0.212   zinc finger protein 160 
LOC344065             0.211   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.211   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.211   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF79                 0.211   zinc finger protein 79 
ZNF180                0.211   zinc finger protein 180 
ZKSCAN1               0.210   zinc finger protein 36 
ZNF300                0.210   zinc finger protein 300 
ZNF286A               0.209   zinc finger protein 286 
ZNF286A               0.209   zinc finger protein 286 
ZNF502                0.208   zinc finger protein 502 
ZNF502                0.208   zinc finger protein 502 
ZNF502                0.208   zinc finger protein 502 
ZNF502                0.208   zinc finger protein 502 
ZNF286B               0.208   zinc finger protein 286B 
ZNF681                0.208   zinc finger protein 681 
ZNF66                 0.207   PREDICTED: zinc finger protein 66 
ZNF66                 0.207   PREDICTED: zinc finger protein 66 
ZNF66                 0.207   PREDICTED: zinc finger protein 66 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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