Guide to the Human Genome
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Name: C4orf44 Sequence: fasta or formatted (278aa) NCBI GI: 111548660
Description:

hypothetical protein LOC345222 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {267aa} hypothetical protein LOC345222 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         18           3
 C cysteine            1.8          5           1
 D aspartate           4.0         11           2
 E glutamate           9.4         26           2
 F phenylalanine       2.5          7           2
 G glycine             5.0         14           1
 H histidine           1.4          4           1
 I isoleucine          2.9          8           2
 K lysine              7.2         20           2
 L leucine            10.1         28           2
 M methionine          4.0         11           2
 N asparagine          1.4          4           1
 P proline             6.5         18           2
 Q glutamine           5.8         16           2
 R arginine            8.3         23           2
 S serine             10.4         29           4
 T threonine           4.3         12           1
 V valine              4.7         13           1
 W tryptophan          1.1          3           1
 Y tyrosine            2.9          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC345222 isoform a 
C4orf44               0.887   hypothetical protein LOC345222 isoform b 
ZSCAN29               0.032   zinc finger protein 690 
MAGEC1                0.024   melanoma antigen family C, 1 
CCDC77                0.023   coiled-coil domain containing 77 isoform b 
CCDC77                0.023   coiled-coil domain containing 77 isoform b 
CCDC77                0.023   coiled-coil domain containing 77 isoform a 
CCDC77                0.023   coiled-coil domain containing 77 isoform b 
HHEX                  0.019   hematopoietically expressed homeobox 
TCHH                  0.019   trichohyalin 
BAT2                  0.019   HLA-B associated transcript-2 
ELFN1                 0.017   extracellular leucine-rich repeat and fibronectin t...
CALCOCO1              0.017   coiled-coil transcriptional coactivator isoform 2 [...
CALCOCO1              0.017   coiled-coil transcriptional coactivator isoform 1 [H...
BZRAP1                0.017   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.017   peripheral benzodiazepine receptor-associated prote...
KIF21B                0.017   kinesin family member 21B 
TTBK1                 0.017   tau tubulin kinase 1 
ZNF434                0.017   zinc finger protein 434 
EPS8                  0.015   epidermal growth factor receptor pathway substrate 8...
GOLGB1                0.015   golgi autoantigen, golgin subfamily b, macrogolgin ...
C6orf204              0.015   chromosome 6 open reading frame 204 isoform a [Homo...
OSBPL3                0.015   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL3                0.015   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.015   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.015   oxysterol-binding protein-like protein 3 isoform a [...
CBL                   0.013   Cas-Br-M (murine) ecotropic retroviral transforming ...
LOC728636             0.013   PREDICTED: similar to golgi autoantigen, golgin sub...
PLEC1                 0.013   plectin 1 isoform 11 
PLEC1                 0.013   plectin 1 isoform 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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