Guide to the Human Genome
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Name: ZSCAN29 Sequence: fasta or formatted (852aa) NCBI GI: 109715825
Description:

zinc finger protein 690

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         51           3
 C cysteine            3.1         26           2
 D aspartate           3.6         31           3
 E glutamate          11.4         97           2
 F phenylalanine       3.6         31           2
 G glycine             6.8         58           2
 H histidine           3.6         31           2
 I isoleucine          2.2         19           2
 K lysine              6.3         54           2
 L leucine             7.5         64           2
 M methionine          1.1          9           2
 N asparagine          2.7         23           2
 P proline             6.2         53           2
 Q glutamine           5.6         48           2
 R arginine            7.9         67           2
 S serine              8.9         76           3
 T threonine           4.6         39           1
 V valine              5.0         43           2
 W tryptophan          1.3         11           1
 Y tyrosine            2.5         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 690 
ZKSCAN2               0.442   zinc finger with KRAB and SCAN domains 2 
ZSCAN20               0.384   zinc finger protein 31 
ZNF434                0.229   zinc finger protein 434 
ZNF436                0.142   zinc finger protein 436 
ZNF436                0.142   zinc finger protein 436 
ZNF544                0.140   zinc finger protein 544 
ZNF774                0.140   zinc finger protein 774 
ZSCAN2                0.139   zinc finger protein 29 isoform 1 
LOC344065             0.138   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.138   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.138   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF180                0.138   zinc finger protein 180 
ZNF167                0.138   zinc finger protein 167 isoform 1 
ZNF3                  0.138   zinc finger protein 3 isoform 2 
ZNF485                0.137   zinc finger protein 485 
DKFZp686E2433         0.137   hypothetical protein LOC345462 
ZNF629                0.137   zinc finger protein 629 
ZFP2                  0.136   zinc finger protein 2 homolog 
ZNF135                0.136   zinc finger protein 135 
ZNF214                0.136   zinc finger protein 214 
ZNF551                0.135   zinc finger protein 551 
ZNF16                 0.135   zinc finger protein 16 
ZNF16                 0.135   zinc finger protein 16 
ZNF329                0.135   zinc finger protein 329 
ZNF852                0.135   PREDICTED: zinc finger protein 852 
ZNF85                 0.135   zinc finger protein 85 
ZNF852                0.134   PREDICTED: zinc finger protein 852 
ZNF852                0.134   PREDICTED: zinc finger protein 852 
ZNF397                0.134   zinc finger protein 397 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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