Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 111548650
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|111548650 family with sequence similarity 170, member A
[Homo sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|111548650 family with sequence similarity 170, member A [Homo... 672 0.0
gi|169194829 PREDICTED: family with sequence similarity 170, mem... 110 2e-24
gi|89031947 PREDICTED: family with sequence similarity 170, memb... 110 2e-24
gi|37550464 PREDICTED: family with sequence similarity 170, memb... 110 2e-24
gi|194097454 hypothetical protein LOC284680 [Homo sapiens] 57 2e-08
gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens] 43 3e-04
gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens] 43 3e-04
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 41 0.001
gi|17975763 myelin transcription factor 1 [Homo sapiens] 40 0.002
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 40 0.002
gi|118600967 shroom family member 4 [Homo sapiens] 40 0.003
gi|21735415 centromere protein B [Homo sapiens] 40 0.004
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 40 0.004
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi... 39 0.005
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 39 0.008
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 38 0.011
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 38 0.011
gi|42476101 TFIIA alpha, p55 isoform 2 [Homo sapiens] 38 0.011
gi|7706735 TFIIA alpha, p55 isoform 1 [Homo sapiens] 38 0.011
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 38 0.011
gi|21450836 zinc finger with UFM1-specific peptidase domain [Hom... 38 0.011
gi|169217548 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|239752637 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|113420837 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|221219020 NYD-SP11 protein [Homo sapiens] 37 0.019
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] 37 0.019
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] 37 0.019
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens] 37 0.019
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 37 0.019
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 37 0.024
>gi|111548650 family with sequence similarity 170, member A [Homo
sapiens]
Length = 329
Score = 672 bits (1735), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MKRRQKRKHLENEESQETAEKGGGMSKSQEDALQPGSTRVAKGWSQGVGEVTSTSEYCSC 60
MKRRQKRKHLENEESQETAEKGGGMSKSQEDALQPGSTRVAKGWSQGVGEVTSTSEYCSC
Sbjct: 1 MKRRQKRKHLENEESQETAEKGGGMSKSQEDALQPGSTRVAKGWSQGVGEVTSTSEYCSC 60
Query: 61 VSSSRKLIHSGIQRIHRDSPQPQSPLAQVQERGETPPRSQHVSLSSYSSYKTCVSSLCVN 120
VSSSRKLIHSGIQRIHRDSPQPQSPLAQVQERGETPPRSQHVSLSSYSSYKTCVSSLCVN
Sbjct: 61 VSSSRKLIHSGIQRIHRDSPQPQSPLAQVQERGETPPRSQHVSLSSYSSYKTCVSSLCVN 120
Query: 121 KEERGMKIYYMQVQMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRN 180
KEERGMKIYYMQVQMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRN
Sbjct: 121 KEERGMKIYYMQVQMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRN 180
Query: 181 LLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTM 240
LLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTM
Sbjct: 181 LLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTM 240
Query: 241 EALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEE 300
EALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEE
Sbjct: 241 EALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEE 300
Query: 301 GQPTEEDLGLRRSWSQCPGCVFHSPKDRN 329
GQPTEEDLGLRRSWSQCPGCVFHSPKDRN
Sbjct: 301 GQPTEEDLGLRRSWSQCPGCVFHSPKDRN 329
>gi|169194829 PREDICTED: family with sequence similarity 170, member
B [Homo sapiens]
Length = 321
Score = 110 bits (274), Expect = 2e-24
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Query: 80 PQPQSPLAQVQERG----ETPPRSQHVSLSSYSSYKTCVSSLCV--NKEERGMKIYYMQV 133
P+ + ++RG + P S+ SYS Y++C S +C N + + +Y V
Sbjct: 92 PREEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCAFYTHV 151
Query: 134 QMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRNLLSDSEPSGEEKE 193
Q +GVAV+WETE E + ++PR+ E + R ++++ + + +
Sbjct: 152 QTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKRQRWNGSSFEMASNTDMRWDLEACKSNC 211
Query: 194 HEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTMEALQEHVQFGIRE 253
E + D L P PDWLVT G RC+ACCRV +++AL EH Q GIRE
Sbjct: 212 SPEPEDIDLLECCLQELREP----PDWLVTTNYGVRCVACCRVLPSLDALLEHAQHGIRE 267
Query: 254 GFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
GFSC +F M + Q +EE++ ++ E +P+ + Q E+
Sbjct: 268 GFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPSDNSECSRPQGEVLSAQQQEK 320
>gi|89031947 PREDICTED: family with sequence similarity 170, member
B [Homo sapiens]
Length = 321
Score = 110 bits (274), Expect = 2e-24
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Query: 80 PQPQSPLAQVQERG----ETPPRSQHVSLSSYSSYKTCVSSLCV--NKEERGMKIYYMQV 133
P+ + ++RG + P S+ SYS Y++C S +C N + + +Y V
Sbjct: 92 PREEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCAFYTHV 151
Query: 134 QMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRNLLSDSEPSGEEKE 193
Q +GVAV+WETE E + ++PR+ E + R ++++ + + +
Sbjct: 152 QTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKRQRWNGSSFEMASNTDMRWDLEACKSNC 211
Query: 194 HEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTMEALQEHVQFGIRE 253
E + D L P PDWLVT G RC+ACCRV +++AL EH Q GIRE
Sbjct: 212 SPEPEDIDLLECCLQELREP----PDWLVTTNYGVRCVACCRVLPSLDALLEHAQHGIRE 267
Query: 254 GFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
GFSC +F M + Q +EE++ ++ E +P+ + Q E+
Sbjct: 268 GFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPSDNSECSRPQGEVLSAQQQEK 320
>gi|37550464 PREDICTED: family with sequence similarity 170, member
B [Homo sapiens]
Length = 321
Score = 110 bits (274), Expect = 2e-24
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Query: 80 PQPQSPLAQVQERG----ETPPRSQHVSLSSYSSYKTCVSSLCV--NKEERGMKIYYMQV 133
P+ + ++RG + P S+ SYS Y++C S +C N + + +Y V
Sbjct: 92 PREEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCAFYTHV 151
Query: 134 QMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRNLLSDSEPSGEEKE 193
Q +GVAV+WETE E + ++PR+ E + R ++++ + + +
Sbjct: 152 QTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKRQRWNGSSFEMASNTDMRWDLEACKSNC 211
Query: 194 HEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTMEALQEHVQFGIRE 253
E + D L P PDWLVT G RC+ACCRV +++AL EH Q GIRE
Sbjct: 212 SPEPEDIDLLECCLQELREP----PDWLVTTNYGVRCVACCRVLPSLDALLEHAQHGIRE 267
Query: 254 GFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
GFSC +F M + Q +EE++ ++ E +P+ + Q E+
Sbjct: 268 GFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPSDNSECSRPQGEVLSAQQQEK 320
>gi|194097454 hypothetical protein LOC284680 [Homo sapiens]
Length = 261
Score = 57.4 bits (137), Expect = 2e-08
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 174 SDVSTRNLLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMAC 233
S+ N+ S S E +S S T +D A W +NG++C+AC
Sbjct: 131 SEDMAENICSSSSSPENTCPREATKKSRHGLDSITSQDILMASR--WHPAQQNGYKCVAC 188
Query: 234 CRVFTTMEALQEHVQFGIREGFSCHVFHLTMAQL 267
CR++ T++ L+ H++ G REGFSC V++ + L
Sbjct: 189 CRMYPTLDFLKSHIKRGFREGFSCKVYYRKLKAL 222
>gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
Length = 111
Score = 43.1 bits (100), Expect = 3e-04
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
G E+++ DE+EEE G E+EEEE+ + +EE+G EE
Sbjct: 45 GEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEE 82
Score = 31.6 bits (70), Expect = 1.0
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 265 AQLTGNMESESTQDEQEEENGNEKEEEEKP-EAKEEEGQPTEED 307
A GN E+E +++ + +E+EEE E +EEEG EED
Sbjct: 33 APANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEED 76
Score = 29.6 bits (65), Expect = 3.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 272 ESESTQDEQEEENGNEKEE--EEKPEAKEEEGQPTEED 307
E E ++E+EEE G+ +EE +E EA+ G+ ED
Sbjct: 57 EEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAED 94
Score = 29.6 bits (65), Expect = 3.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRR 312
G E E + + EEE+G+E EE E K ++D+ ++
Sbjct: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKK 104
Score = 28.5 bits (62), Expect = 8.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
++ + + + EENG ++ + E E +EE G+ EE+
Sbjct: 32 DAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEE 67
>gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
Length = 110
Score = 43.1 bits (100), Expect = 3e-04
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
G E+++ DE+EEE G E+EEEE+ + +EE+G EE
Sbjct: 44 GEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEE 81
Score = 30.4 bits (67), Expect = 2.3
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 265 AQLTGNMESESTQDEQEEENGNEKEEEEKP--EAKEEEGQPTEED 307
A GN E+ EQE +N ++EEEE E +EEEG EED
Sbjct: 33 APANGNANEEN--GEQEADNEVDEEEEEGGEEEEEEEEGDGEEED 75
Score = 29.6 bits (65), Expect = 3.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 272 ESESTQDEQEEENGNEKEE--EEKPEAKEEEGQPTEED 307
E E ++E+EEE G+ +EE +E EA+ G+ ED
Sbjct: 56 EEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAED 93
Score = 29.6 bits (65), Expect = 3.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRR 312
G E E + + EEE+G+E EE E K ++D+ ++
Sbjct: 60 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKK 103
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 41.2 bits (95), Expect = 0.001
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 266 QLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
Q G E E ++++EEE +E+EEEE+ E +EEE + EE+
Sbjct: 728 QANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEE 769
Score = 40.8 bits (94), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E +DE+EEE E+EEEE+ E +EEE + EE+
Sbjct: 735 EEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 770
Score = 38.5 bits (88), Expect = 0.008
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E +E+EEE+ E+EEEE+ E +EEE + EE+
Sbjct: 736 EEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771
Score = 37.7 bits (86), Expect = 0.014
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 262 LTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
L Q N + E ++E++EE E EEEE+ E +EEE + EE+
Sbjct: 722 LAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEE 767
Score = 37.0 bits (84), Expect = 0.024
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 252 REGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
R GFS + L + ++E+EEE +E+EEEE E +EEE + EE+
Sbjct: 707 RVGFSHMLLTTPQVPLAPVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEE 762
Score = 37.0 bits (84), Expect = 0.024
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLG 309
E E +DE+EEE E+EEEE+ E +EEE LG
Sbjct: 742 EEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALG 779
Score = 30.0 bits (66), Expect = 3.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLR 311
E + ++E+EEE E+EEEE+ E + E LG R
Sbjct: 746 EEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPR 785
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 40.4 bits (93), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E +DE+EEE E+EEEE+ E +EEE + EE+
Sbjct: 268 EEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Score = 39.7 bits (91), Expect = 0.004
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 267 LTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
L+ E E ++E+EEE +E+EEEE+ E +EEE + EE+
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEE 295
Score = 39.3 bits (90), Expect = 0.005
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E ++E+EEE+ E+EEEE+ E +EEE + EE+
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 297
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E ++E+EEE E+EEEE+ E +EEE + EE+
Sbjct: 270 EEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 305
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E ++E+EEE E+EEEE+ E +EEE + EE+
Sbjct: 271 EEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 306
Score = 38.5 bits (88), Expect = 0.008
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRRSWSQCPGCVF 322
E E ++E+EE+ E+EEEE+ E +EEE + EE+ P +F
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIF 313
Score = 38.1 bits (87), Expect = 0.011
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+ E ++E+EEE E+EEEE+ E +EEE + EE+
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 296
Score = 36.6 bits (83), Expect = 0.032
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
G + E +E+EEE E+E+EE+ E +EEE + EE+
Sbjct: 253 GILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEE 291
Score = 28.5 bits (62), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEE 300
E E ++E+EEE E+EEE P+ +E
Sbjct: 287 EEEEEEEEEEEEEEEEEEEEAAPDVIFQE 315
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGL 310
E E ++EQEEE E++EEE+ E +EEE + EE L L
Sbjct: 861 EEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSL 899
Score = 38.1 bits (87), Expect = 0.011
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLG 309
G + +++E+EEE E+EEEE+ + +EEE + EE+ G
Sbjct: 852 GGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKG 892
Score = 36.6 bits (83), Expect = 0.032
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
G+ E E ++E++EE E+E+EE+ E +EEE + E+
Sbjct: 857 GDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEE 895
Score = 34.3 bits (77), Expect = 0.16
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRRSWSQ 316
G E ++E+E+E E+EE+E+ E +EEE + + L W +
Sbjct: 856 GGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPE 903
Score = 28.5 bits (62), Expect = 8.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+ + +D + G+ +EEEE+ E +EEE + E++
Sbjct: 844 DEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQE 879
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRRSWSQCPGCVFHSPKD 327
+ + Q +QEEE E+EEEE+ E +EEE + EE+L + S+ G +P++
Sbjct: 1123 QQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEEELPPQYFSSETSGSCALNPEE 1178
Score = 33.9 bits (76), Expect = 0.20
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+ + Q +Q+EE E+EEEE+ E +EEE EE+
Sbjct: 1122 KQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEE 1157
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 39.7 bits (91), Expect = 0.004
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 265 AQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLG 309
A +T +++SE ++E+EEE E+EEE + E +EEEG+ EE+ G
Sbjct: 395 ATITTSLKSEGEEEEEEEEE--EEEEEGEGEEEEEEGEEEEEEGG 437
Score = 39.3 bits (90), Expect = 0.005
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
E E ++E+EEE G +EEEE+ E +EEEG EE
Sbjct: 407 EEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEE 441
Score = 37.0 bits (84), Expect = 0.024
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 263 TMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTE 305
T + G E E ++E+EEE E+EEEE E +EE G+ E
Sbjct: 399 TSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEE 441
Score = 33.5 bits (75), Expect = 0.27
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 23/120 (19%)
Query: 184 DSEPSGEEKEHEERTESDSLPGSPTVEDTPRA--KTPDWLVTMENGFRCMACCRVFTTME 241
+ E GEE+E EE + DS E++ + DW + +E
Sbjct: 438 EGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGV---------------VE 482
Query: 242 ALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEG 301
A +G +E C H L G +S+S D +EE++ E +E+E + EE+G
Sbjct: 483 AGGSFGAYGAQEEAQCPTLHF----LEGGEDSDS--DSEEEDDEEEDDEDEDDDDDEEDG 536
Score = 32.7 bits (73), Expect = 0.46
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
G E E + E+EEE G E EE + E EEEG ++
Sbjct: 420 GEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDE 458
Score = 30.8 bits (68), Expect = 1.7
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 272 ESESTQDEQEEENGNEKEEE--EKPEAKEEEGQPTEEDL 308
E E + E+EEE G E+EEE E E EEE E D+
Sbjct: 416 EEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDV 454
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 39.7 bits (91), Expect = 0.004
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 271 MESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+ ES+++E+EEE+ E+EEEE+ E EEE + EE+
Sbjct: 1064 LSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEE 1100
Score = 38.5 bits (88), Expect = 0.008
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 273 SESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRRS 313
SE ++E++EE E+EEEE+ E +EEE + EE+ ++ S
Sbjct: 1069 SEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSS 1109
Score = 37.4 bits (85), Expect = 0.019
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 264 MAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+ +L+ E ++E EEE E+EEEE E +EEE + EE+
Sbjct: 1061 LLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEE 1104
Score = 37.0 bits (84), Expect = 0.024
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDL 308
E E ++++EEE E+EEE++ E +EEE + EE++
Sbjct: 1070 EEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENI 1106
Score = 36.2 bits (82), Expect = 0.041
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 266 QLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
QL + S ++E+EE+ E+EEEE+ E +EEE + EE+
Sbjct: 1060 QLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEE 1101
Score = 34.3 bits (77), Expect = 0.16
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 262 LTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEE 300
L +++ + E E +E+EEE E+E+EE+ E +EEE
Sbjct: 1062 LELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEE 1100
Score = 33.5 bits (75), Expect = 0.27
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 278 DEQEEENGNEKEEEEKPEAKEEEG 301
+E+EEE E+EEEE+ E +EEEG
Sbjct: 1351 EEEEEEEEEEEEEEEEEEGEEEEG 1374
Score = 32.7 bits (73), Expect = 0.46
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQ 302
+ E ++E+EEE E+EEEE+ E +EE Q
Sbjct: 1077 DEEEEEEEEEEEEDEEEEEEEEEEEEEENIQ 1107
Score = 31.6 bits (70), Expect = 1.0
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 277 QDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
++E+EEE E+EEEE+ +EE G E+D
Sbjct: 1351 EEEEEEEEEEEEEEEEEEGEEEEGGGNVEKD 1381
Score = 30.4 bits (67), Expect = 2.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQP 303
E E ++E+EE+ E+EEEE+ E + + P
Sbjct: 1079 EEEEEEEEEEEDEEEEEEEEEEEEEENIQSSP 1110
Score = 29.6 bits (65), Expect = 3.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQP 303
E E ++E+E+E E+EEEE+ E + P
Sbjct: 1080 EEEEEEEEEEDEEEEEEEEEEEEEENIQSSPP 1111
Score = 28.5 bits (62), Expect = 8.6
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 139 VAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRNLLSDSEPSGEEKEHEERT 198
+ + E +ET E+L Q V T P + +L+ E EE+E EE
Sbjct: 1305 IRIEEEVKETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEE 1364
Query: 199 ESD 201
E +
Sbjct: 1365 EEE 1367
>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
sapiens]
Length = 631
Score = 39.3 bits (90), Expect = 0.005
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 240 MEALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQE--EENGNEKEEEEKPEAK 297
+E+L++ F + G S +FH L G E+E ++++E EE G E+EEEE+ E +
Sbjct: 84 LESLEDFEHF-LMSGES--LFHYP---LVGEEETEREEEDEEIQEEGGEEEEEEEEEEEE 137
Query: 298 EEEGQPTEED 307
EEE + EE+
Sbjct: 138 EEEEEEEEEE 147
Score = 36.2 bits (82), Expect = 0.041
Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 35/143 (24%)
Query: 168 RVGTPPSDVSTRNLLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTPDWLVTMENG 227
R G P+D ST N SD E + E+ E E ++ED +L++ E+
Sbjct: 58 RDGGFPNDASTENRSSDQESASEDIELE------------SLEDFEH-----FLMSGESL 100
Query: 228 FRCMACCRVFTTMEALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNE 287
F T E E +Q G E E ++E+EEE E
Sbjct: 101 FHYPLVGEEETEREEEDEEIQE------------------EGGEEEEEEEEEEEEEEEEE 142
Query: 288 KEEEEKPEAKEEEGQPTEEDLGL 310
+EEEE+P A + E L
Sbjct: 143 EEEEEQPRAGPQGSGGNHEQYSL 165
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 38.5 bits (88), Expect = 0.008
Identities = 64/310 (20%), Positives = 117/310 (37%), Gaps = 60/310 (19%)
Query: 2 KRRQKRKHLENEESQETAEKGGGMSKSQEDALQPGSTRVAKGWSQGVGEVTSTSEYCSCV 61
K+++ +K + E+ ++ EK G SK+ A+Q ++ + + E + +
Sbjct: 313 KKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEEL 372
Query: 62 SSSRKLIHSGIQ-RIHRDSPQPQSPLAQVQERGETPPRSQHVSLSSYSSYKTCVSSLCV- 119
+ RK Q + R + + ++++ G+ +SQ + + + + + V
Sbjct: 373 EAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGVE 432
Query: 120 --NKEERGMKIYYMQVQMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVS 177
+K+ K + + K + E++E ES ME EV+ G P + +
Sbjct: 433 VPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSES------MELCAAVEVMEQGVPEKEET 486
Query: 178 TRNLLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVF 237
P E E EE TE L DW
Sbjct: 487 ---------PPPVEPEEEEDTEDAGLD--------------DW----------------- 506
Query: 238 TTMEALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAK 297
EA+ + EG H+ ++ N E E ++E+EEE+ E EEEE+ E +
Sbjct: 507 ---EAMASDEETEKVEGNKVHI------EVKENPEEEEEEEEEEEED-EESEEEEEEEGE 556
Query: 298 EEEGQPTEED 307
E + EED
Sbjct: 557 SEGSEGDEED 566
Score = 31.2 bits (69), Expect = 1.3
Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 196 ERTESDSLPGS-PTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTMEALQEHVQFGIREG 254
E DSLP P ED R K P L + E C V + + E +
Sbjct: 432 EVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEE--TPPP 489
Query: 255 FSCHVFHLTMAQLTGNMESESTQDEQEEENGN-----------EKEEEEKPEAKEEEGQP 303
T + E+ ++ +E E+ GN E+EEEE+ E ++EE +
Sbjct: 490 VEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEE 549
Query: 304 TEEDLG 309
EE+ G
Sbjct: 550 EEEEEG 555
Score = 28.9 bits (63), Expect = 6.6
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 26/217 (11%)
Query: 2 KRRQKRKHLENEESQETAEKGGGMSKSQEDALQPGSTRVAKGWSQGVGEVTSTSEYCS-- 59
++R+++K E E + ++G ++KSQ +A + +QGV EV S
Sbjct: 385 EKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGV-EVPSKDSLPKKR 443
Query: 60 --CVSSSRKLIHSGIQRIHRDSPQPQSPLAQVQERG-----ETPP-----RSQHVSLSSY 107
RK I ++ +V E+G ETPP + +
Sbjct: 444 PIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGL 503
Query: 108 SSYKTCVSSLCVNKEERGMKIYYMQVQMNKGVAVSWETEETLESLEKQPRMEEVTLSEVV 167
++ S K E G K+ +++V+ N E EE E E+ EE E
Sbjct: 504 DDWEAMASDEETEKVE-GNKV-HIEVKENPE-----EEEEEEEEEEEDEESEEEEEEEGE 556
Query: 168 RVGTPPSDVSTRNLLSDSEPSGE--EKEHEERTESDS 202
G+ + + +SD + SG+ +K+ + SDS
Sbjct: 557 SEGSEGDEEDEK--VSDEKDSGKTLDKKPSKEMSSDS 591
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 38.1 bits (87), Expect = 0.011
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 273 SESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+E ++E EEE G E++EEEK E +EE Q E++
Sbjct: 1872 TEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDE 1906
Score = 37.7 bits (86), Expect = 0.014
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTE 305
G E E ++E EEE EKE+EEK E + EG+ E
Sbjct: 1884 GEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEE 1920
Score = 37.0 bits (84), Expect = 0.024
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 268 TGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
T E E ++E EEE+ EKEE+E+ A+E+E + EE+
Sbjct: 1872 TEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEE 1911
Score = 33.5 bits (75), Expect = 0.27
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 266 QLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
Q+ +E E +E+EEE+ E+ EEE E KEE+ + T ++
Sbjct: 1861 QILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQE 1902
Score = 32.7 bits (73), Expect = 0.46
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
E E + E+E+E E++EEE + KE+E + EE
Sbjct: 1878 EDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEE 1912
Score = 28.9 bits (63), Expect = 6.6
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 272 ESESTQDEQEEENGNEK--EEEEKPEAKEEEGQPTEEDLGLRRSWSQ 316
E +DE+E+E E+ +E+E E +EEE E++ GL Q
Sbjct: 1882 EEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEEGLLQ 1928
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 38.1 bits (87), Expect = 0.011
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 273 SESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+E ++E EEE G E++EEEK E +EE Q E++
Sbjct: 1872 TEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDE 1906
Score = 37.7 bits (86), Expect = 0.014
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTE 305
G E E ++E EEE EKE+EEK E + EG+ E
Sbjct: 1884 GEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEE 1920
Score = 37.0 bits (84), Expect = 0.024
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 268 TGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
T E E ++E EEE+ EKEE+E+ A+E+E + EE+
Sbjct: 1872 TEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEE 1911
Score = 33.5 bits (75), Expect = 0.27
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 266 QLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
Q+ +E E +E+EEE+ E+ EEE E KEE+ + T ++
Sbjct: 1861 QILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQE 1902
Score = 32.7 bits (73), Expect = 0.46
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
E E + E+E+E E++EEE + KE+E + EE
Sbjct: 1878 EDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEE 1912
Score = 28.9 bits (63), Expect = 6.6
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 272 ESESTQDEQEEENGNEK--EEEEKPEAKEEEGQPTEEDLGLRRSWSQ 316
E +DE+E+E E+ +E+E E +EEE E++ GL Q
Sbjct: 1882 EEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEEGLLQ 1928
>gi|42476101 TFIIA alpha, p55 isoform 2 [Homo sapiens]
Length = 337
Score = 38.1 bits (87), Expect = 0.011
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 266 QLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDL 308
Q+ G ++ S +DE EEE+ ++ EEE+K + E+GQ EE L
Sbjct: 233 QVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 275
>gi|7706735 TFIIA alpha, p55 isoform 1 [Homo sapiens]
Length = 376
Score = 38.1 bits (87), Expect = 0.011
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 266 QLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDL 308
Q+ G ++ S +DE EEE+ ++ EEE+K + E+GQ EE L
Sbjct: 272 QVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 314
>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
Length = 587
Score = 38.1 bits (87), Expect = 0.011
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 241 EALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEE 300
E LQE + EGF+ +A L+ + + E ++ +EEE E+EEEE E +EEE
Sbjct: 339 EQLQE-----VLEGFN---MAKVLASLSDDEDEEEEEEGEEEEEEAEEEEEEDEEEEEEE 390
Query: 301 GQPTEED 307
+ EE+
Sbjct: 391 EEEEEEE 397
Score = 30.4 bits (67), Expect = 2.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPT 304
E E +DE+EEE E+EEEE + + E T
Sbjct: 377 EEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSAT 409
Score = 29.6 bits (65), Expect = 3.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQ 302
E+E ++E EEE E+EEEE+ + +G+
Sbjct: 375 EAEEEEEEDEEEEEEEEEEEEEEPQQRGQGE 405
>gi|21450836 zinc finger with UFM1-specific peptidase domain [Homo
sapiens]
Length = 578
Score = 38.1 bits (87), Expect = 0.011
Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 22/170 (12%)
Query: 144 ETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRNLLSDSEPSGEEKEHEERTESDSL 203
E+ + L+S EKQ + E+ S +PP + G+ +EH E E+
Sbjct: 125 ESRKFLKSREKQSSLTEIKGSVYETTYSPP----------ECPFCGKIEEHSEDMETHVK 174
Query: 204 PGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTMEALQEHVQFGIREGFSCHVFHLT 263
+ D P L + C C + T LQEHV + E + F
Sbjct: 175 TKHANLLDIPLEDCDQPL------YDCPMCGLICTNYHILQEHVDLHLEE----NSFQQG 224
Query: 264 MAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRRS 313
M ++ + + + Q+EE+ + EE + E EE Q + GL S
Sbjct: 225 MDRVQCSGDLQLAHQLQQEEDRKRRSEESRQEI--EEFQKLQRQYGLDNS 272
>gi|169217548 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 37.7 bits (86), Expect = 0.014
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
G E+++ DE+ EE+G E+EEE++ + +EE+G E +
Sbjct: 44 GEQEADNEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAE 82
Score = 32.3 bits (72), Expect = 0.60
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 265 AQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
A GN E+ + E + E E EE + E +E+EG EED
Sbjct: 33 APANGNANEENGEQEADNEVDEEGEESGEEEEEEKEGDGEEED 75
>gi|239752637 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 37.7 bits (86), Expect = 0.014
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
G E+++ DE+ EE+G E+EEE++ + +EE+G E +
Sbjct: 44 GEQEADNEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAE 82
Score = 32.3 bits (72), Expect = 0.60
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 265 AQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
A GN E+ + E + E E EE + E +E+EG EED
Sbjct: 33 APANGNANEENGEQEADNEVDEEGEESGEEEEEEKEGDGEEED 75
>gi|113420837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 37.7 bits (86), Expect = 0.014
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
G E+++ DE+ EE+G E+EEE++ + +EE+G E +
Sbjct: 44 GEQEADNEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAE 82
Score = 32.3 bits (72), Expect = 0.60
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 265 AQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
A GN E+ + E + E E EE + E +E+EG EED
Sbjct: 33 APANGNANEENGEQEADNEVDEEGEESGEEEEEEKEGDGEEED 75
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 37.4 bits (85), Expect = 0.019
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 260 FHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLG 309
F M L +E + + +EEE E+EE E+ E +EEE + EE+ G
Sbjct: 2226 FSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEG 2275
Score = 32.3 bits (72), Expect = 0.60
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E ++E+EEE E+EEE K E + EE Q +E+
Sbjct: 2249 EEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEE 2284
Score = 32.0 bits (71), Expect = 0.78
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 272 ESESTQDEQEEENGNEKEEEE----KPEAKEEEGQPTEE 306
E E ++E+ EE EKEEEE K E K+EE Q EE
Sbjct: 2266 EEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEE 2304
Score = 30.8 bits (68), Expect = 1.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 267 LTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
L+ E E ++E+ EE +EEEE+ E +E E + E++
Sbjct: 2243 LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKE 2283
Score = 30.0 bits (66), Expect = 3.0
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 270 NMESESTQDEQEEENGNEKE--EEEKPEAKEEEGQ 302
++ SE ++ +EEE E+E EEE+ +EEEG+
Sbjct: 2242 SLSSEEEEEREEEEEREEEEVREEEEERKEEEEGE 2276
Score = 29.3 bits (64), Expect = 5.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306
E E Q E+EEE +K++E+K E +E+ + EE
Sbjct: 2274 EGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEE 2308
Score = 28.9 bits (63), Expect = 6.6
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E ++E+EE E+ EE++ E +EEE + +++
Sbjct: 2258 EEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKE 2293
>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
Length = 1123
Score = 37.4 bits (85), Expect = 0.019
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 239 TMEALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQD--EQEEENGNEKEEEEKPEA 296
T E L E + + EG LTM + G+ ESESTQ+ E+E+E + +EEE+ +
Sbjct: 553 TEEELTEQQEVLLGEGA------LTMPR-EGSTESESTQEDLEEEDEEDDGEEEEDCIQV 605
Query: 297 KEEEGQPTEED 307
K+EEG+ E+
Sbjct: 606 KDEEGESGAEE 616
>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
Length = 1122
Score = 37.4 bits (85), Expect = 0.019
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 239 TMEALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQD--EQEEENGNEKEEEEKPEA 296
T E L E + + EG LTM + G+ ESESTQ+ E+E+E + +EEE+ +
Sbjct: 552 TEEELTEQQEVLLGEGA------LTMPR-EGSTESESTQEDLEEEDEEDDGEEEEDCIQV 604
Query: 297 KEEEGQPTEED 307
K+EEG+ E+
Sbjct: 605 KDEEGESGAEE 615
>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 37.4 bits (85), Expect = 0.019
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 269 GNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
G E++ DE+ EE+G E+EEE++ + +EE+G E +
Sbjct: 44 GEQEADKEVDEEGEESGEEEEEEKEGDGEEEDGDEEEAE 82
Score = 32.7 bits (73), Expect = 0.46
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 265 AQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
A GN E+ + E ++E E EE + E +E+EG EED
Sbjct: 33 APANGNANEENGEQEADKEVDEEGEESGEEEEEEKEGDGEEED 75
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 37.4 bits (85), Expect = 0.019
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 257 CHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRR 312
CH+F +A E + + ++EEE +EEE + KEEE + EE+ LRR
Sbjct: 169 CHLFSTYVASHKIEKEEQEKKRKEEEERRRREEEERERLQKEEEKRRREEEERLRR 224
Score = 29.3 bits (64), Expect = 5.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E + Q+EE +EEEE+ +EEE + EE+
Sbjct: 200 EEEERERLQKEEEKRRREEEERLRREEEERRRIEEE 235
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 37.0 bits (84), Expect = 0.024
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E ++E+EEE ++EEEEK E KEE+ + E++
Sbjct: 127 EEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKE 162
Score = 37.0 bits (84), Expect = 0.024
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E E +DE+EEE EKEE+E E +E+EG+ EE+
Sbjct: 136 EEEKEEDEEEEEKEEEKEEDE--EEEEKEGKKMEEE 169
Score = 36.2 bits (82), Expect = 0.041
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 274 ESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
E ++ +EEE EKEE+E+ E KEEE + EE+
Sbjct: 125 EEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEE 158
Score = 35.8 bits (81), Expect = 0.054
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLG 309
E E ++E++EE E EEEE+ E ++EE + EE G
Sbjct: 126 EEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEG 163
Score = 31.6 bits (70), Expect = 1.0
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 271 MESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEED 307
+E E + E+EE+ ++E+EE+ E +EE+ + EE+
Sbjct: 123 VEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEE 159
Score = 31.2 bits (69), Expect = 1.3
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 272 ESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRRS 313
E E ++++EE+ +E+EEE++ + EEE E D ++R+
Sbjct: 141 EDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTEIQRT 182
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.124 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,315,900
Number of Sequences: 37866
Number of extensions: 794437
Number of successful extensions: 16933
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 8992
Number of HSP's gapped (non-prelim): 5125
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.