GTF2A1 36225

Name: GTF2A1	Sequence: fasta or formatted (376aa)		NCBI GI: 7706735
Description: TFIIA alpha, p55 isoform 1		Referenced in: RNA Polymerase and General Transcription Factors Small RNAs in RNA Processing
Other entries for this name: alt prot [337aa] TFIIA alpha, p55 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 32 3 C cysteine 0.3 1 1 D aspartate 7.2 27 3 E glutamate 6.9 26 3 F phenylalanine 1.9 7 1 G glycine 5.3 20 2 H histidine 3.2 12 7 I isoleucine 5.3 20 2 K lysine 3.5 13 1 L leucine 6.9 26 3 M methionine 1.9 7 1 N asparagine 4.0 15 1 P proline 6.4 24 1 Q glutamine 16.2 61 4 R arginine 1.6 6 1 S serine 4.5 17 2 T threonine 5.9 22 2 V valine 8.5 32 3 W tryptophan 0.8 3 1 Y tyrosine 1.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TFIIA alpha, p55 isoform 1 GTF2A1 0.897 TFIIA alpha, p55 isoform 2 STON1-GTF2A1L 0.152 STON1-GTF2A1L protein GTF2A1L 0.152 general transcription factor IIA, 1-like isoform 1 [... GTF2A1L 0.088 general transcription factor IIA, 1-like isoform 2 [... ZNF853 0.048 zinc finger protein 853 EP400 0.040 E1A binding protein p400 PELP1 0.039 proline, glutamic acid and leucine rich protein 1 [... AMOT 0.039 angiomotin isoform 1 MYT1 0.039 myelin transcription factor 1 MYT1L 0.039 myelin transcription factor 1-like PRDM2 0.037 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.037 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.037 retinoblastoma protein-binding zinc finger protein i... ARID2 0.037 AT rich interactive domain 2 (ARID, RFX-like) FOXP2 0.036 forkhead box P2 isoform II MED15 0.036 mediator complex subunit 15 isoform b TBP 0.034 TATA box binding protein BMP2K 0.034 BMP-2 inducible kinase isoform a BMP2K 0.034 BMP-2 inducible kinase isoform b MED15 0.034 mediator complex subunit 15 isoform a FOXP2 0.033 forkhead box P2 isoform I FOXP2 0.033 forkhead box P2 isoform III NCL 0.033 nucleolin HUWE1 0.033 HECT, UBA and WWE domain containing 1 CENPB 0.032 centromere protein B NRD1 0.032 nardilysin isoform b NRD1 0.032 nardilysin isoform a PHC1 0.032 polyhomeotic 1-like POU6F2 0.030 POU domain, class 6, transcription factor 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.