Guide to the Human Genome
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Name: FAM170B Sequence: fasta or formatted (321aa) NCBI GI: 37550464
Description:

PREDICTED: family with sequence similarity 170, member B

Not currently referenced in the text

Other entries for this name:
alt mRNA {321aa} PREDICTED: family with sequence similarity 170, member B
alt mRNA {321aa} PREDICTED: family with sequence similarity 170, member B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         20           2
 C cysteine            4.7         15           2
 D aspartate           4.4         14           1
 E glutamate          10.9         35           3
 F phenylalanine       3.4         11           2
 G glycine             5.6         18           1
 H histidine           2.8          9           1
 I isoleucine          2.5          8           1
 K lysine              1.6          5           1
 L leucine             5.9         19           2
 M methionine          2.2          7           1
 N asparagine          1.9          6           1
 P proline             6.9         22           2
 Q glutamine           8.1         26           3
 R arginine            7.2         23           3
 S serine             11.5         37           3
 T threonine           5.3         17           2
 V valine              4.7         15           1
 W tryptophan          2.2          7           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: family with sequence similarity 170, memb... 
FAM170B               1.000   PREDICTED: family with sequence similarity 170, mem...
FAM170B               1.000   PREDICTED: family with sequence similarity 170, memb...
FAM170A               0.131   family with sequence similarity 170, member A [Homo...
C1orf111              0.046   hypothetical protein LOC284680 
LOC100292378          0.014   PREDICTED: hypothetical protein 
PMFBP1                0.012   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.012   polyamine modulated factor 1 binding protein 1 isof...
TBKBP1                0.012   TBK1 binding protein 1 
BCL2L11               0.011   BCL2-like 11 isoform 1 
MICAL1                0.011   microtubule associated monoxygenase, calponin and L...
MICAL1                0.011   microtubule associated monoxygenase, calponin and L...
MAML2                 0.009   mastermind-like 2 
LAMB3                 0.009   laminin, beta 3 precursor 
LAMB3                 0.009   laminin, beta 3 precursor 
LAMB3                 0.009   laminin, beta 3 precursor 
FAM13C                0.009   hypothetical protein LOC220965 isoform 1 
FAM13C                0.009   hypothetical protein LOC220965 isoform 3 
ARHGEF15              0.008   Rho guanine exchange factor 15 
MUC3A                 0.008   PREDICTED: mucin 3A, cell surface associated, parti...
FNDC1                 0.008   fibronectin type III domain containing 1 
HRC                   0.008   histidine rich calcium binding protein precursor [Hom...
DSCAML1               0.006   Down syndrome cell adhesion molecule like 1 
WDFY2                 0.006   WD repeat and FYVE domain containing 2 
ZNF592                0.006   zinc finger protein 592 
EXO1                  0.006   exonuclease 1 isoform b 
EXO1                  0.006   exonuclease 1 isoform a 
EXO1                  0.006   exonuclease 1 isoform b 
GOLIM4                0.006   golgi integral membrane protein 4 
PRDM15                0.006   PR domain containing 15 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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