Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169213065
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]
(851 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens] 1778 0.0
gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens] 1761 0.0
gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens] 1625 0.0
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 96 1e-19
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 88 4e-17
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 78 3e-14
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 70 6e-12
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 63 1e-09
gi|24415404 MDN1, midasin homolog [Homo sapiens] 60 9e-09
gi|109637791 transcription factor-like nuclear regulator [Homo s... 60 1e-08
gi|16445033 ACRC protein [Homo sapiens] 59 2e-08
gi|21735415 centromere protein B [Homo sapiens] 58 4e-08
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 55 4e-07
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 55 4e-07
gi|210032580 SET domain containing 1B [Homo sapiens] 55 4e-07
gi|4504487 histidine rich calcium binding protein precursor [Hom... 54 6e-07
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 54 8e-07
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 54 8e-07
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 52 2e-06
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 52 2e-06
gi|46409304 glutamate-rich 1 [Homo sapiens] 52 2e-06
gi|157738619 smoothelin-like 1 [Homo sapiens] 50 1e-05
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 49 2e-05
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 49 2e-05
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 49 2e-05
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 49 2e-05
gi|42476169 Paf1, RNA polymerase II associated factor, homolog [... 49 2e-05
gi|55956788 nucleolin [Homo sapiens] 49 3e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 49 3e-05
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 48 4e-05
>gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 851
Score = 1778 bits (4604), Expect = 0.0
Identities = 851/851 (100%), Positives = 851/851 (100%)
Query: 1 MFPRVSCSKHQCDSCTRHWGCLVRRRVPGGLTAGTRIIHLRETERRSSQRRAELGDCDAS 60
MFPRVSCSKHQCDSCTRHWGCLVRRRVPGGLTAGTRIIHLRETERRSSQRRAELGDCDAS
Sbjct: 1 MFPRVSCSKHQCDSCTRHWGCLVRRRVPGGLTAGTRIIHLRETERRSSQRRAELGDCDAS 60
Query: 61 PTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQE 120
PTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQE
Sbjct: 61 PTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQE 120
Query: 121 DGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPT 180
DGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPT
Sbjct: 121 DGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPT 180
Query: 181 EHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQED 240
EHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQED
Sbjct: 181 EHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQED 240
Query: 241 GPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVT 300
GPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVT
Sbjct: 241 GPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVT 300
Query: 301 GIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKDKENYWM 360
GIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKDKENYWM
Sbjct: 301 GIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKDKENYWM 360
Query: 361 NTVVLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFIQQPLTI 420
NTVVLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFIQQPLTI
Sbjct: 361 NTVVLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFIQQPLTI 420
Query: 421 HWEVFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLCSEAMSY 480
HWEVFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLCSEAMSY
Sbjct: 421 HWEVFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLCSEAMSY 480
Query: 481 TSCCPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIGEQQSPE 540
TSCCPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIGEQQSPE
Sbjct: 481 TSCCPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIGEQQSPE 540
Query: 541 MSLSQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQRAPSDYS 600
MSLSQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQRAPSDYS
Sbjct: 541 MSLSQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQRAPSDYS 600
Query: 601 GSDPVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADPRQGLVA 660
GSDPVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADPRQGLVA
Sbjct: 601 GSDPVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADPRQGLVA 660
Query: 661 VSVAEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEVTTAMAE 720
VSVAEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEVTTAMAE
Sbjct: 661 VSVAEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEVTTAMAE 720
Query: 721 RQGGPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVEVPKWKS 780
RQGGPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVEVPKWKS
Sbjct: 721 RQGGPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVEVPKWKS 780
Query: 781 LYGSPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYGSPTAEV 840
LYGSPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYGSPTAEV
Sbjct: 781 LYGSPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYGSPTAEV 840
Query: 841 PYGSPSMEVPL 851
PYGSPSMEVPL
Sbjct: 841 PYGSPSMEVPL 851
>gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 1070
Score = 1761 bits (4560), Expect = 0.0
Identities = 846/848 (99%), Positives = 846/848 (99%), Gaps = 2/848 (0%)
Query: 4 RVSCSKHQCDSCTRHWGCLVRRRVPGGLTAGTRIIHLRETERRSSQRRAELGDCDASPTE 63
RVSCSKHQCDSCTRHWGCLVRRRVPGGLTAGTRIIHLRETERRSSQRRAELGDCDASPTE
Sbjct: 225 RVSCSKHQCDSCTRHWGCLVRRRVPGGLTAGTRIIHLRETERRSSQRRAELGDCDASPTE 284
Query: 64 HDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGP 123
HDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGP
Sbjct: 285 HDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGP 344
Query: 124 EDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHE 183
EDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEH
Sbjct: 345 EDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEH- 403
Query: 184 HGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPE 243
GVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPE
Sbjct: 404 -GVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPE 462
Query: 244 DARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVTGII 303
DARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVTGII
Sbjct: 463 DARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVTGII 522
Query: 304 SSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKDKENYWMNTV 363
SSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKDKENYWMNTV
Sbjct: 523 SSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKDKENYWMNTV 582
Query: 364 VLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFIQQPLTIHWE 423
VLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFIQQPLTIHWE
Sbjct: 583 VLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFIQQPLTIHWE 642
Query: 424 VFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLCSEAMSYTSC 483
VFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLCSEAMSYTSC
Sbjct: 643 VFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLCSEAMSYTSC 702
Query: 484 CPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIGEQQSPEMSL 543
CPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIGEQQSPEMSL
Sbjct: 703 CPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIGEQQSPEMSL 762
Query: 544 SQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQRAPSDYSGSD 603
SQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQRAPSDYSGSD
Sbjct: 763 SQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQRAPSDYSGSD 822
Query: 604 PVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADPRQGLVAVSV 663
PVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADPRQGLVAVSV
Sbjct: 823 PVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADPRQGLVAVSV 882
Query: 664 AEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEVTTAMAERQG 723
AEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEVTTAMAERQG
Sbjct: 883 AEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEVTTAMAERQG 942
Query: 724 GPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVEVPKWKSLYG 783
GPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVEVPKWKSLYG
Sbjct: 943 GPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVEVPKWKSLYG 1002
Query: 784 SPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYGSPTAEVPYG 843
SPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYGSPTAEVPYG
Sbjct: 1003 SPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYGSPTAEVPYG 1062
Query: 844 SPSMEVPL 851
SPSMEVPL
Sbjct: 1063 SPSMEVPL 1070
>gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 1015
Score = 1625 bits (4207), Expect = 0.0
Identities = 786/797 (98%), Positives = 789/797 (98%), Gaps = 5/797 (0%)
Query: 58 DASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQ-EDGPEDASPTEHGV 116
DASPTEH VGQEEDGPEDASPTEH V Q+EDGPEDASPTEHGV+Q EDGPEDASPTEHGV
Sbjct: 221 DASPTEHGVGQEEDGPEDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGV 280
Query: 117 DQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPED 176
DQQEDGPEDARPTEHG+DQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPED
Sbjct: 281 DQQEDGPEDARPTEHGVDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPED 340
Query: 177 ASPTEHEHGVDQEEDGPEDASPTEH--GVDQEEDGPEDASPTEHGVDQEDGPEDARPTEH 234
ASPTEH GVDQEEDGPEDASPTEH GVDQEEDGPEDASPTEHGVDQEDGPEDARPTEH
Sbjct: 341 ASPTEH--GVDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEH 398
Query: 235 GVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKA 294
GVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKA
Sbjct: 399 GVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKA 458
Query: 295 NSAHVTGIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKD 354
NSAHVTGIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKD
Sbjct: 459 NSAHVTGIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKD 518
Query: 355 KENYWMNTVVLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFI 414
KENYWMNTVVLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFI
Sbjct: 519 KENYWMNTVVLGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEESLTAKHQFI 578
Query: 415 QQPLTIHWEVFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLC 474
QQPLTIHWEVFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLC
Sbjct: 579 QQPLTIHWEVFQSGATLPSPRGSWPCREMVVLTGGPMKYVQGQVMQWSLKEHQELSQHLC 638
Query: 475 SEAMSYTSCCPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIG 534
SEAMSYTSCCPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIG
Sbjct: 639 SEAMSYTSCCPPSLEGISRTNRKLNAPLSSSAEMRRDIGQQCVCTMGSLADLPSCKASIG 698
Query: 535 EQQSPEMSLSQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQR 594
EQQSPEMSLSQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQR
Sbjct: 699 EQQSPEMSLSQSWEAVNGYRPKPSKAEGYEENSKGIRDGAHGRDRCLHGTQAILPRYQQR 758
Query: 595 APSDYSGSDPVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADP 654
APSDYSGSDPVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADP
Sbjct: 759 APSDYSGSDPVTSPRAPEACGVSSLQPRAPEACSPGRALGSQTSSKGFPNTSEMAVLADP 818
Query: 655 RQGLVAVSVAEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEV 714
RQGLVAVSVAEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEV
Sbjct: 819 RQGLVAVSVAEGQKSLPQTPYQSPPRYCSTISGNVDPQPDLLPSPSCQAHTVCSCIVSEV 878
Query: 715 TTAMAERQGGPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVE 774
TTAMAERQGGPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVE
Sbjct: 879 TTAMAERQGGPPRASVSPPHGLREWGMEVPQWKSLYESPSMEVPYGSPSMEVPLWKSPVE 938
Query: 775 VPKWKSLYGSPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYG 834
VPKWKSLYGSPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYG
Sbjct: 939 VPKWKSLYGSPTVEVPLWKSPMKAPLWKSLYESFSMELPLWKILYGSLSMEVSLWKFLYG 998
Query: 835 SPTAEVPYGSPSMEVPL 851
SPTAEVPYGSPSMEVPL
Sbjct: 999 SPTAEVPYGSPSMEVPL 1015
Score = 133 bits (334), Expect = 8e-31
Identities = 68/83 (81%), Positives = 71/83 (85%), Gaps = 4/83 (4%)
Query: 53 ELGDCDASPTEHDVG--QEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDAS 110
E G DASPTEH+ G QEEDGPEDASPTEHGVD QEDGPEDA PTEHGV+QEDGPEDA
Sbjct: 352 EDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVD-QEDGPEDARPTEHGVDQEDGPEDAR 410
Query: 111 PTEHGVDQQEDGPEDARPTEHGI 133
PTEHGVD QEDGPEDA TEHG+
Sbjct: 411 PTEHGVD-QEDGPEDASRTEHGV 432
Score = 105 bits (261), Expect = 2e-22
Identities = 55/74 (74%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Query: 43 TERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQ 102
TE + E G DASPTEH V Q EDGPEDA PTEHGVD QEDGPEDA PTEHGV+Q
Sbjct: 361 TEHEHGVDQEEDGPEDASPTEHGVDQ-EDGPEDARPTEHGVD-QEDGPEDARPTEHGVDQ 418
Query: 103 EDGPEDASPTEHGV 116
EDGPEDAS TEHGV
Sbjct: 419 EDGPEDASRTEHGV 432
>gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo
sapiens]
Length = 1393
Score = 95.9 bits (237), Expect = 1e-19
Identities = 96/333 (28%), Positives = 134/333 (40%), Gaps = 49/333 (14%)
Query: 59 ASPTEHD----VGQEEDGPEDASPTEHG----VDQQEDGPEDASPTEHG-----VNQEDG 105
A PTEH+ + E+ A PTE+G ++ P A PTEHG N+
Sbjct: 877 AEPTEHEEMTPLANEKTTLSPAEPTENGERTPFTNEKTTPSSAEPTEHGERTPLANEITT 936
Query: 106 PEDASPTEHG--VDQQEDGPEDARPTEHGID--QEEDGPEDASLTEHG----VDQQEDGP 157
P A PTEHG + ++ P A+PTEHG E+ P A TE+G + +
Sbjct: 937 PSRAEPTEHGERIANEKATPSPAKPTEHGETTVNEDTTPSSAEPTENGERTPLANENTTT 996
Query: 158 EDASPTEHG--IDQEEDGPEDASPTEHEHGVDQ--EEDGPEDASPTEHGV----DQEEDG 209
TEHG E+ P A PTEH E+ P A PTEH E
Sbjct: 997 SPTESTEHGERTANEKTTPSPAEPTEHGERTPSANEKTIPSPAKPTEHEEMTPSANENTT 1056
Query: 210 PEDASPTEHG-----VDQEDGPEDARPTEHGV-----DQEDGPEDARPTEHGVDQEDGPE 259
P PTEHG +++ PTEHG +++ P A+PTEHG ++ P
Sbjct: 1057 PSPVKPTEHGEKTTLANEKITLSPEGPTEHGAKTTSANEKITPSLAKPTEHG-ERTTSPN 1115
Query: 260 D--ASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAH--VTGIISSRSD----SEL 311
D S HR A ++ K+ AH +T + ++ +
Sbjct: 1116 DKITSSAAESTEHRDRATSANVITPAPAEPIKHAKRTTLAHEKMTQVTEKSTEHPEKTTS 1175
Query: 312 LDWNSKHTGEKDALFLESKCSSLAPEGNPVPQK 344
+ T EK L+ E K + PVP+K
Sbjct: 1176 TTEKTTRTPEKPTLYSE-KTICTKGKNTPVPEK 1207
Score = 90.1 bits (222), Expect = 8e-18
Identities = 76/244 (31%), Positives = 100/244 (40%), Gaps = 35/244 (14%)
Query: 43 TERRSSQRRAELGDCDASPTEH--DVGQEEDGPEDASPTEHG--VDQQEDGPEDASPTEH 98
TE R + A PTE+ E+ P A PTE+ + A PTEH
Sbjct: 823 TENRERTANEKTTQFPAEPTENRESTANEKTTPFPAEPTENREWTANENTTLSPAEPTEH 882
Query: 99 G-----VNQEDGPEDASPTEHG----VDQQEDGPEDARPTEHG----IDQEEDGPEDASL 145
N++ A PTE+G ++ P A PTEHG + E P A
Sbjct: 883 EEMTPLANEKTTLSPAEPTENGERTPFTNEKTTPSSAEPTEHGERTPLANEITTPSRAEP 942
Query: 146 TEHG--VDQQEDGPEDASPTEHGID--QEEDGPEDASPTEHEHGVD--QEEDGPEDASPT 199
TEHG + ++ P A PTEHG E+ P A PTE+ E T
Sbjct: 943 TEHGERIANEKATPSPAKPTEHGETTVNEDTTPSSAEPTENGERTPLANENTTTSPTEST 1002
Query: 200 EHG--VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEH-----GVDQEDGPEDARP 247
EHG E+ P A PTEHG +++ P A+PTEH ++ P +P
Sbjct: 1003 EHGERTANEKTTPSPAEPTEHGERTPSANEKTIPSPAKPTEHEEMTPSANENTTPSPVKP 1062
Query: 248 TEHG 251
TEHG
Sbjct: 1063 TEHG 1066
Score = 86.7 bits (213), Expect = 9e-17
Identities = 73/258 (28%), Positives = 100/258 (38%), Gaps = 32/258 (12%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPE--DASPTEHG 99
E R++ L + E P A PTE+ + A PTEHG
Sbjct: 306 ENRERTANENTTLSPAEPIENRERTANENTAPFPAGPTENREMTANENTTLFPAEPTEHG 365
Query: 100 ---VNQEDGPEDASPTEHG--VDQQEDGPEDARPTEHG----IDQEEDGPEDASLTEHG- 149
N+ P A PTEHG + P A PTEHG ++ A TEHG
Sbjct: 366 ERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSSAESTEHGE 425
Query: 150 ---VDQQEDGPEDASPTEHG--IDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEH--G 202
+ + P A PTE+ E P A PTE+ E+ PTE+
Sbjct: 426 RTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSPVEPTENRET 485
Query: 203 VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEHG-----VDQEDGPEDARPTEH-- 250
E+ P A PTE+G +++ A PTEHG ++ P A PTE+
Sbjct: 486 TANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRE 545
Query: 251 -GVDQEDGPEDASRTEHG 267
+++ P A TE+G
Sbjct: 546 RTANEKTTPSPAEPTENG 563
Score = 84.7 bits (208), Expect = 3e-16
Identities = 77/263 (29%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 42 ETERRSSQRRAELGDCDASPTEH----DVGQEEDGPEDASPTEHG--VDQQEDGPEDASP 95
E +R+ + A PTEH + E A PTE+ ++ A P
Sbjct: 782 ENGKRTPFANEKTTSSSAEPTEHAERTPLANENTTSSPAEPTENRERTANEKTTQFPAEP 841
Query: 96 TEHG---VNQEDGPEDASPTEHG--VDQQEDGPEDARPTEHG----IDQEEDGPEDASLT 146
TE+ N++ P A PTE+ + A PTEH + E+ A T
Sbjct: 842 TENRESTANEKTTPFPAEPTENREWTANENTTLSPAEPTEHEEMTPLANEKTTLSPAEPT 901
Query: 147 EHG----VDQQEDGPEDASPTEHG----IDQEEDGPEDASPTEHEHGVDQEEDGPEDASP 198
E+G ++ P A PTEHG + E P A PTEH + E+ P A P
Sbjct: 902 ENGERTPFTNEKTTPSSAEPTEHGERTPLANEITTPSRAEPTEHGERIANEKATPSPAKP 961
Query: 199 TEHG--VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEHG---VDQEDGPEDARPT 248
TEHG E+ P A PTE+G ++ TEHG +++ P A PT
Sbjct: 962 TEHGETTVNEDTTPSSAEPTENGERTPLANENTTTSPTESTEHGERTANEKTTPSPAEPT 1021
Query: 249 EHG-----VDQEDGPEDASRTEH 266
EHG +++ P A TEH
Sbjct: 1022 EHGERTPSANEKTIPSPAKPTEH 1044
Score = 75.9 bits (185), Expect = 2e-13
Identities = 70/244 (28%), Positives = 99/244 (40%), Gaps = 35/244 (14%)
Query: 43 TERRSSQRRAELGDCDASPTEH--DVGQEEDGPEDASPTEHG----VDQQEDGPEDASPT 96
TE R + + PTE+ E+ P A PTE+G ++ A PT
Sbjct: 461 TENRETTANEKTTLSPVEPTENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPT 520
Query: 97 EHG-----VNQEDGPEDASPTEH--GVDQQEDGPEDARPTEHG----IDQEEDGPEDASL 145
EHG N+ P A PTE+ ++ P A PTE+G + E+ P A
Sbjct: 521 EHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEP 580
Query: 146 TEHG----VDQQEDGPEDASPTEH----GIDQEEDGPEDASPTEHEHGVDQEEDGPEDAS 197
TE+G ++ A PTEH + E P A PTE+ E P A
Sbjct: 581 TENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAG 640
Query: 198 PTEHG--VDQEEDGPEDASPTEH---GVDQEDGPEDARPTEHG-----VDQEDGPEDARP 247
PTE+ E+ A PTE+ +++ A PTE+G +++ A P
Sbjct: 641 PTENREMTANEKTTLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEP 700
Query: 248 TEHG 251
TEHG
Sbjct: 701 TEHG 704
Score = 73.6 bits (179), Expect = 7e-13
Identities = 77/285 (27%), Positives = 108/285 (37%), Gaps = 59/285 (20%)
Query: 42 ETERRSSQRRAELGDCDASPTEHD----VGQEEDGPEDASPTEHG--VDQQEDGPEDASP 95
E +R+ + A PTEH + E A PTE+ ++ P A P
Sbjct: 681 ENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTLSPAEPTENRERTANEKTTPFPAEP 740
Query: 96 TEH---GVNQEDGPEDASPTEHG----VDQQEDGPEDARPTEHG----IDQEEDGPEDAS 144
TE+ N+ P A PTE+G + ++ P A PTE+G E+ A
Sbjct: 741 TENRERTANENTTPSPAQPTENGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAE 800
Query: 145 LTEHG----VDQQEDGPEDASPTEH---------------------GIDQEEDGPEDASP 179
TEH + + A PTE+ E+ P A P
Sbjct: 801 PTEHAERTPLANENTTSSPAEPTENRERTANEKTTQFPAEPTENRESTANEKTTPFPAEP 860
Query: 180 TEHEHGVDQEEDGPEDASPTEH----GVDQEEDGPEDASPTEHG-----VDQEDGPEDAR 230
TE+ E A PTEH + E+ A PTE+G +++ P A
Sbjct: 861 TENREWTANENTTLSPAEPTEHEEMTPLANEKTTLSPAEPTENGERTPFTNEKTTPSSAE 920
Query: 231 PTEHG-----VDQEDGPEDARPTEHG---VDQEDGPEDASRTEHG 267
PTEHG ++ P A PTEHG +++ P A TEHG
Sbjct: 921 PTEHGERTPLANEITTPSRAEPTEHGERIANEKATPSPAKPTEHG 965
Score = 66.2 bits (160), Expect = 1e-10
Identities = 67/244 (27%), Positives = 97/244 (39%), Gaps = 35/244 (14%)
Query: 42 ETERRSSQRRAELGDCDASPTEHD----VGQEEDGPEDASPTEHG--VDQQEDGPEDASP 95
E +R+ + A PTEH+ + E P A PTE+ + P A P
Sbjct: 582 ENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGP 641
Query: 96 TEHG---VNQEDGPEDASPTEHG--VDQQEDGPEDARPTEHG----IDQEEDGPEDASLT 146
TE+ N++ A PTE+ ++ A PTE+G E+ A T
Sbjct: 642 TENREMTANEKTTLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEPT 701
Query: 147 EHG----VDQQEDGPEDASPTEHG--IDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTE 200
EHG + + A PTE+ E+ P A PTE+ E P A PTE
Sbjct: 702 EHGERTPLANENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTE 761
Query: 201 HG----VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEHG-----VDQEDGPEDAR 246
+G + E+ P A PTE+G +++ A PTEH ++ A
Sbjct: 762 NGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHAERTPLANENTTSSPAE 821
Query: 247 PTEH 250
PTE+
Sbjct: 822 PTEN 825
Score = 64.7 bits (156), Expect = 3e-10
Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 26/191 (13%)
Query: 76 ASPTEHG--VDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGI 133
A PTEHG + + P A PTE+ + SP E +++ E+ P G
Sbjct: 283 AEPTEHGGRTANENNTPSPAEPTENRERTANENTTLSPAEPIENRERTANENTAPFPAGP 342
Query: 134 DQEEDGPEDASLTEHGVDQQEDGPEDASPTEHG--IDQEEDGPEDASPTEHEHGVDQEED 191
+ + + + T A PTEHG E P A PTEH E
Sbjct: 343 TENREMTANENTTLF----------PAEPTEHGERTANENTTPSPAEPTEHGERTANENT 392
Query: 192 GPEDASPTEHG----VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEH---GVDQE 239
P A PTEHG ++ A TEHG ++ P A PTE+ ++
Sbjct: 393 TPSPAEPTEHGERTPFANDKTTSSSAESTEHGERTPLANENTTPSPAEPTENRERTANEN 452
Query: 240 DGPEDARPTEH 250
P A PTE+
Sbjct: 453 TTPSPAGPTEN 463
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 87.8 bits (216), Expect = 4e-17
Identities = 73/258 (28%), Positives = 101/258 (39%), Gaps = 32/258 (12%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPE--DASPTEHG 99
E R++ L + + E P A PTE+ + A PTEHG
Sbjct: 368 ENRERTANENTTLSPAEPTENRERTANENTAPFPAGPTENREMTANENTTLFPAEPTEHG 427
Query: 100 ---VNQEDGPEDASPTEHG--VDQQEDGPEDARPTEHG----IDQEEDGPEDASLTEHG- 149
N+ P A PTEHG + P A PTEHG ++ A TEHG
Sbjct: 428 ERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSSAESTEHGE 487
Query: 150 ---VDQQEDGPEDASPTEH--GIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEH--G 202
+ + P A PTE+ E P A PTE+ E+ PTE+
Sbjct: 488 RTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSPVEPTENRET 547
Query: 203 VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEHG-----VDQEDGPEDARPTEH-- 250
E+ P A PTE+G +++ A PTEHG ++ P A PTE+
Sbjct: 548 TANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRE 607
Query: 251 -GVDQEDGPEDASRTEHG 267
+++ P A TE+G
Sbjct: 608 RTANEKTTPSPAEPTENG 625
Score = 81.3 bits (199), Expect = 4e-15
Identities = 75/257 (29%), Positives = 100/257 (38%), Gaps = 47/257 (18%)
Query: 43 TERRSSQRRAELGDCDASPTEHD--VGQEEDGPEDASPTEHG--VDQQEDGPEDASPTEH 98
TE R A PTEH E P A PTEHG + P A PTEH
Sbjct: 405 TENREMTANENTTLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEH 464
Query: 99 G-----VNQEDGPEDASPTEHG----VDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHG 149
G N + A TEHG + + P A PTE ++E E+ +
Sbjct: 465 GERTPFANDKTTSSSAESTEHGERTPLANENTTPSPAEPTE---NRERTANENTT----- 516
Query: 150 VDQQEDGPEDASPTEH--GIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHG----V 203
P A PTE+ E+ PTE+ E+ P A PTE+G
Sbjct: 517 -------PSPAGPTENRETTANEKTTLSPVEPTENRETTANEKTTPSPAEPTENGQRTPF 569
Query: 204 DQEEDGPEDASPTEHG-----VDQEDGPEDARPTEH---GVDQEDGPEDARPTEHG---- 251
E+ A PTEHG ++ P A PTE+ +++ P A PTE+G
Sbjct: 570 ANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTP 629
Query: 252 -VDQEDGPEDASRTEHG 267
+++ P A TE+G
Sbjct: 630 LANEKTTPSLAEPTENG 646
Score = 77.4 bits (189), Expect = 5e-14
Identities = 99/402 (24%), Positives = 151/402 (37%), Gaps = 53/402 (13%)
Query: 43 TERRSSQRRAELGDCDASPTEH--DVGQEEDGPEDASPTEHG----VDQQEDGPEDASPT 96
TE R + + PTE+ E+ P A PTE+G ++ A PT
Sbjct: 523 TENRETTANEKTTLSPVEPTENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPT 582
Query: 97 EHG-----VNQEDGPEDASPTEH--GVDQQEDGPEDARPTEHG----IDQEEDGPEDASL 145
EHG N+ P A PTE+ ++ P A PTE+G + E+ P A
Sbjct: 583 EHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEP 642
Query: 146 TEHG----VDQQEDGPEDASPTEH----GIDQEEDGPEDASPTEHEHGVDQEEDGPEDAS 197
TE+G ++ A PTEH + E P A PTE+ E P A
Sbjct: 643 TENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAG 702
Query: 198 PTEHG--VDQEEDGPEDASPTEH---GVDQEDGPEDARPTEHG-----VDQEDGPEDARP 247
PTE+ E+ A PTE+ +++ A PTE+G +++ A P
Sbjct: 703 PTENREMTANEKTTLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEP 762
Query: 248 TEHGVDQEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVTGIISSRS 307
TEHG E+ + + G R ++ + + + N ++ S
Sbjct: 763 TEHGERTPLANENTTLSPAGPTENRERT-----ANEKTTPFPAEPTENRERTANENTTPS 817
Query: 308 DSELLDWNSKHTGEKDALFLESKCSSLA---PEGNPVPQKRSRATFHSKDKENYWMNTVV 364
++ G++ L E SLA G P + T S + + T
Sbjct: 818 PAQ-----PTENGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHAERT-P 871
Query: 365 LGRDLQEAAPAEPFGDTERSRAEPPLSKDFHYQAEIVTYEES 406
L + ++PAEP + ER+ E K + AE ES
Sbjct: 872 LANENTTSSPAEPTENRERTANE----KTTQFPAEPTENRES 909
Score = 66.2 bits (160), Expect = 1e-10
Identities = 67/244 (27%), Positives = 97/244 (39%), Gaps = 35/244 (14%)
Query: 42 ETERRSSQRRAELGDCDASPTEHD----VGQEEDGPEDASPTEHG--VDQQEDGPEDASP 95
E +R+ + A PTEH+ + E P A PTE+ + P A P
Sbjct: 644 ENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGP 703
Query: 96 TEHG---VNQEDGPEDASPTEHG--VDQQEDGPEDARPTEHG----IDQEEDGPEDASLT 146
TE+ N++ A PTE+ ++ A PTE+G E+ A T
Sbjct: 704 TENREMTANEKTTLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEPT 763
Query: 147 EHG----VDQQEDGPEDASPTEHG--IDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTE 200
EHG + + A PTE+ E+ P A PTE+ E P A PTE
Sbjct: 764 EHGERTPLANENTTLSPAGPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTE 823
Query: 201 HG----VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEHG-----VDQEDGPEDAR 246
+G + E+ P A PTE+G +++ A PTEH ++ A
Sbjct: 824 NGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHAERTPLANENTTSSPAE 883
Query: 247 PTEH 250
PTE+
Sbjct: 884 PTEN 887
Score = 65.5 bits (158), Expect = 2e-10
Identities = 57/181 (31%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 93 ASPTEHG---VNQEDGPEDASPTEHGVDQQEDGP--EDARPTEHG--IDQEEDGPEDASL 145
A PTEHG N+ + P A PTE+ + A PTE+ E P A
Sbjct: 345 AEPTEHGGRTANENNTPSPAEPTENRERTANENTTLSPAEPTENRERTANENTAPFPAGP 404
Query: 146 TEHGVDQQEDGPE--DASPTEHG--IDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEH 201
TE+ + A PTEHG E P A PTEH E P A PTEH
Sbjct: 405 TENREMTANENTTLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEH 464
Query: 202 G----VDQEEDGPEDASPTEHG-----VDQEDGPEDARPTEH---GVDQEDGPEDARPTE 249
G ++ A TEHG ++ P A PTE+ ++ P A PTE
Sbjct: 465 GERTPFANDKTTSSSAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTE 524
Query: 250 H 250
+
Sbjct: 525 N 525
Score = 53.1 bits (126), Expect = 1e-06
Identities = 56/202 (27%), Positives = 78/202 (38%), Gaps = 25/202 (12%)
Query: 42 ETERRSSQRRAELGDCDASPTEHD----VGQEEDGPEDASPTEHG--VDQQEDGPEDASP 95
E +R+ + A PTEH + E A PTE+ ++ P A P
Sbjct: 743 ENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTLSPAGPTENRERTANEKTTPFPAEP 802
Query: 96 TEHG---VNQEDGPEDASPTEHG----VDQQEDGPEDARPTEHG----IDQEEDGPEDAS 144
TE+ N+ P A PTE+G + ++ P A PTE+G E+ A
Sbjct: 803 TENRERTANENTTPSPAQPTENGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAE 862
Query: 145 LTEHG----VDQQEDGPEDASPTEHG--IDQEEDGPEDASPTEHEHGVDQEEDGPEDASP 198
TEH + + A PTE+ E+ A PTE+ E+ P A P
Sbjct: 863 PTEHAERTPLANENTTSSPAEPTENRERTANEKTTQFPAEPTENRESTANEKTTPFPAEP 922
Query: 199 TEH--GVDQEEDGPEDASPTEH 218
TE+ E A PTEH
Sbjct: 923 TENREWTANENTTLSPAEPTEH 944
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 78.2 bits (191), Expect = 3e-14
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 17/228 (7%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGP-EDASPTEHGV 100
ET+ + + E D +A E G+ ++ E+A P GV+ Q E+A E
Sbjct: 1985 ETQEAEGEAQPESEDVEAPEAE---GEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGET 2041
Query: 101 NQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDA 160
+ +G DA P GV+ E E+A+ E G QE +G +A VD QE E A
Sbjct: 2042 QKTEG--DAQPESDGVEAPE-AEEEAQEAE-GEVQEAEG--EAHPESEDVDAQEAEGE-A 2094
Query: 161 SPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGV 220
P G++ PE + G++ E E A P G++ E E A P GV
Sbjct: 2095 QPESEGVE----APEAEGEAQKAEGIEAPETEGE-AQPESEGIEAPEAEGE-AQPESEGV 2148
Query: 221 DQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGV 268
+ +D +A+P G++ ++ E+A+P GV+ + +A G+
Sbjct: 2149 EAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGI 2196
Score = 70.5 bits (171), Expect = 6e-12
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 31/249 (12%)
Query: 44 ERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVD--------QQEDGP----- 90
E + ++ A+ + P E +V + ++ E+A P V+ Q+ +G
Sbjct: 1939 EAQEAEEAAQEAEGQTQP-ESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPES 1997
Query: 91 EDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGV 150
ED E ++ E+A P GV+ Q + G Q+ +G DA GV
Sbjct: 1998 EDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEG--DAQPESDGV 2055
Query: 151 DQQEDGPEDASPTEHGIDQEEDGP-----EDASPTEHEHGVDQEEDGPEDASPTEHGVDQ 205
+ E E+ + G QE +G ED E E E +G E +P G Q
Sbjct: 2056 EAPE--AEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVE--APEAEGEAQ 2111
Query: 206 EEDGPE------DASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPE 259
+ +G E +A P G++ + +A+P GV+ +D +A+P G++ ++ E
Sbjct: 2112 KAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEE 2171
Query: 260 DASRTEHGV 268
+A GV
Sbjct: 2172 EAQPELEGV 2180
Score = 70.1 bits (170), Expect = 8e-12
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 28/245 (11%)
Query: 42 ETERRSSQRRAELGDCDASP-TEHDVGQEEDGPE-----DASPTEHGVDQQEDGPEDASP 95
E + + + E +A P +E + QE +G DA P GV+ E E+A
Sbjct: 2008 EMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPE-AEEEAQE 2066
Query: 96 TEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPE-------DASLTEH 148
E V + +G +A P VD QE E A+P G++ E E +A TE
Sbjct: 2067 AEGEVQEAEG--EAHPESEDVDAQEAEGE-AQPESEGVEAPEAEGEAQKAEGIEAPETEG 2123
Query: 149 GVDQQEDGPE------DASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHG 202
+ +G E +A P G++ + D +A P G++ +E E+A P G
Sbjct: 2124 EAQPESEGIEAPEAEGEAQPESEGVEAQ-DAEGEAQP--ESEGIEAQE-AEEEAQPELEG 2179
Query: 203 VDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDAS 262
V+ E E A P G++ + +A+P GV+ + E+A+P GV+ + +A
Sbjct: 2180 VEAPEAEGE-AQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQ 2238
Query: 263 RTEHG 267
G
Sbjct: 2239 PESEG 2243
Score = 70.1 bits (170), Expect = 8e-12
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDG---PEDASPTEHGVDQQEDGPEDASPTEH 98
E + +S A+ + + TE D E DG PE + + ++ +A P
Sbjct: 2024 EAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESE 2083
Query: 99 GVNQEDGPEDASPTEHGVDQQE-----------DGPE---DARPTEHGIDQEEDGPEDAS 144
V+ ++ +A P GV+ E + PE +A+P GI+ E E A
Sbjct: 2084 DVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGE-AQ 2142
Query: 145 LTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVD 204
GV+ Q D +A P GI+ +E E+A P GV+ E E A P G++
Sbjct: 2143 PESEGVEAQ-DAEGEAQPESEGIEAQE-AEEEAQP--ELEGVEAPEAEGE-AQPESEGIE 2197
Query: 205 QEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQ 254
E E A P GV+ + E+A+P GV+ + +A+P G Q
Sbjct: 2198 APEAEGE-AQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQ 2246
Score = 62.0 bits (149), Expect = 2e-09
Identities = 78/312 (25%), Positives = 122/312 (39%), Gaps = 33/312 (10%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPE------DASP 95
E + + E D DA E + E +G E +P G Q+ +G E +A P
Sbjct: 2070 EVQEAEGEAHPESEDVDAQEAEGEAQPESEGVE--APEAEGEAQKAEGIEAPETEGEAQP 2127
Query: 96 TEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQED 155
G+ + +A P GV+ Q D +A+P GI+ +E E+A GV+ E
Sbjct: 2128 ESEGIEAPEAEGEAQPESEGVEAQ-DAEGEAQPESEGIEAQE-AEEEAQPELEGVEAPE- 2184
Query: 156 GPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASP 215
+A P GI+ E E E GV+ E E+A P GV+ E +A P
Sbjct: 2185 AEGEAQPESEGIEAPEAEGEAQPELE---GVEAPE-AEEEAQPEPEGVETPE-AEGEAQP 2239
Query: 216 TEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRA 275
G Q + + + E+ E + P ED P H+ +
Sbjct: 2240 ESEGETQGEKKGSPQVSLGDGQSEEASESSSPV-----PEDRPTPPPSPGGDTPHQRPGS 2294
Query: 276 CAAFLSSRRDNLYLSFKK-ANSAHVTGIISSRSDSELLDWNSKHTGEKDALFLESKCSSL 334
SSR + ++K + + HV G +RS ++K TG A E K + +
Sbjct: 2295 QTGPSSSRASSWGNCWQKDSENDHVLG--DTRSP------DAKSTGTPHA---ERKATRM 2343
Query: 335 APEGNPVPQKRS 346
PE + Q+ +
Sbjct: 2344 YPESSTSEQEEA 2355
Score = 57.8 bits (138), Expect = 4e-08
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 13/236 (5%)
Query: 44 ERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQE 103
E ++ A+ + +A P DV + + +A P V+ E + P G
Sbjct: 1852 EAPEAEGDAQEAEGEAQPESEDV-EAPEAEGEAQPESEDVETPE-AEWEVQPESEGAEAP 1909
Query: 104 DGPEDASPTEHGVDQQEDGPEDARPTEHGIDQE-EDGPEDA---SLTEHGVDQQEDGPED 159
+ ++A P V+ E ED +E QE E+ ++A + E V + ++ E+
Sbjct: 1910 EAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEE 1969
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHG 219
A P ++ E E T+ G Q E +A E + + E E+A P G
Sbjct: 1970 AQPESEDVEALEVEVE----TQEAEGEAQPESEDVEAPEAEGEMQEAE---EEAQPESDG 2022
Query: 220 VDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRA 275
V+ + E E + + DA+P GV+ + E+A E V G A
Sbjct: 2023 VEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEA 2078
Score = 50.8 bits (120), Expect = 5e-06
Identities = 62/251 (24%), Positives = 90/251 (35%), Gaps = 26/251 (10%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPE------DASPTEHGVDQQEDGPEDASP 95
E + + + E +A E + E +G E +A P G++ E E A P
Sbjct: 2149 EAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGE-AQP 2207
Query: 96 TEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQ-EEDGPEDASLTEHGVDQQE 154
GV + E+A P GV+ E +A+P G Q E+ G SL G Q E
Sbjct: 2208 ELEGVEAPEAEEEAQPEPEGVETPE-AEGEAQPESEGETQGEKKGSPQVSL---GDGQSE 2263
Query: 155 DGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPED-- 212
+ E +SP D+ P T H+ Q GP + + G ++D D
Sbjct: 2264 EASESSSPVPE--DRPTPPPSPGGDTPHQRPGSQ--TGPSSSRASSWGNCWQKDSENDHV 2319
Query: 213 ----ASPTEHGVDQEDGPEDAR---PTEHGVDQEDGPEDARPTEHGVDQ-EDGPEDASRT 264
SP A P +QE+ P +R E G + D ED +
Sbjct: 2320 LGDTRSPDAKSTGTPHAERKATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQEDQALG 2379
Query: 265 EHGVGHRAGRA 275
GRA
Sbjct: 2380 SLAPTEAVGRA 2390
Score = 43.5 bits (101), Expect = 8e-04
Identities = 50/172 (29%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 103 EDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASP 162
ED E S + E E+ E +++ ++G E L E V +E +
Sbjct: 1273 EDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGEGLQEEAVQLEE------TK 1326
Query: 163 TEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPT------EHGVDQEE--DGPEDAS 214
TE G+ +E E+ TE E G +EE E+ T E GV EE +GPE
Sbjct: 1327 TEEGLQEEGVQLEETKETEGE-GQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGL 1385
Query: 215 PTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGP---EDASR 263
E +E E+ P E V ++ E + P G QED P E+A R
Sbjct: 1386 QGE--ALEEGLKEEGLPEEGSVHGQELSEASSPDGKG-SQEDDPVQEEEAGR 1434
Score = 42.4 bits (98), Expect = 0.002
Identities = 69/295 (23%), Positives = 112/295 (37%), Gaps = 48/295 (16%)
Query: 59 ASPTEHDVGQEEDGPEDASPT-----EHGVDQQEDGPEDASPTE-HGVNQEDGPEDASPT 112
A T D + + + AS E+ V ++ E TE G+ +E + + T
Sbjct: 1268 ACATNEDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGEGLQEEAVQLEETKT 1327
Query: 113 EHGVDQQEDGPEDARPTEHGIDQEEDGPED-------ASLTEHGVDQQE--DGPE---DA 160
E G+ ++ E+ + TE QEE+ + L E GV +E +GPE
Sbjct: 1328 EEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGLQG 1387
Query: 161 SPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDAS----PT 216
E G+ +EE PE+ S E DG S + V +EE G AS P
Sbjct: 1388 EALEEGL-KEEGLPEEGSVHGQELSEASSPDG--KGSQEDDPVQEEEAGRASASAEPCPA 1444
Query: 217 EHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGP-------EDASRTEHGVG 269
E + + P T+ + P G+++ G A T+
Sbjct: 1445 EGTEEPTEPPSHLSETDPSASERQSGSQLEP---GLEKPPGATMMGQEHTQAQPTQGAAE 1501
Query: 270 HRAGRACAAFLSSRRDNLYLSF-----KKANSAHVTGIIS------SRSDSELLD 313
+ AC+A L D +++S +KA AH+ ++ D++LLD
Sbjct: 1502 RSSSVACSAALDC--DPIWVSVLLKKTEKAFLAHLASAVAELRARWGLQDNDLLD 1554
Score = 39.7 bits (91), Expect = 0.012
Identities = 47/220 (21%), Positives = 78/220 (35%), Gaps = 43/220 (19%)
Query: 82 GVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPE 141
GVD+ EDG +N++ P+ + Q+ +G T G + E E
Sbjct: 1739 GVDEGEDGEGSQR-----LNRDKDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQE 1793
Query: 142 DASLTEHGV--------------------DQ---QEDGPE---------DASPTEHGIDQ 169
++E G DQ Q DG E +A P G++
Sbjct: 1794 GEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEA 1853
Query: 170 EEDGPEDASPTEHEHGVDQEE-DGPE---DASPTEHGVDQEEDGPEDASPTEHGVDQEDG 225
E DA E E + E+ + PE +A P V+ E + P G + +
Sbjct: 1854 PE-AEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPE-AEWEVQPESEGAEAPEA 1911
Query: 226 PEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
++A+P V+ + + P G + ++ E A E
Sbjct: 1912 EKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAE 1951
Score = 34.7 bits (78), Expect = 0.38
Identities = 38/179 (21%), Positives = 64/179 (35%), Gaps = 18/179 (10%)
Query: 34 GTRIIHLRETERRSSQRRA----ELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDG 89
G ++ +ETE Q E+ + + + Q E+ E G +E
Sbjct: 1335 GVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGLQGEALEEGL 1394
Query: 90 PEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDAS---LT 146
E+ P E V+ ++ E +SP G QED P + +EE G AS
Sbjct: 1395 KEEGLPEEGSVHGQELSEASSP--DGKGSQEDDP---------VQEEEAGRASASAEPCP 1443
Query: 147 EHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQ 205
G ++ + P S T+ + + G + E G A PT+ ++
Sbjct: 1444 AEGTEEPTEPPSHLSETDPSASERQSGSQLEPGLEKPPGATMMGQEHTQAQPTQGAAER 1502
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 70.5 bits (171), Expect = 6e-12
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 18/232 (7%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVN 101
ETE R ++ E G+ + E G+ E+ E+ E + +E+ E G
Sbjct: 800 ETEGRGEEKE-EGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKG 858
Query: 102 QEDGPEDASPTE----HGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGP 157
+E+G E E G ++E+G + G +EE+G + G ++E+G
Sbjct: 859 EEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEG- 917
Query: 158 EDASPTEHGIDQEEDGPEDASPTEHE--HGVDQEEDGPEDASPTEHGVDQEEDGPEDASP 215
+ E G + E +G E+ E E G +EE+G + E + EE+G +
Sbjct: 918 -EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEE 976
Query: 216 TEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHG 267
E ++E+G + ++E+G E+ E G +E+G + E G
Sbjct: 977 GEGEGEEEEGEGEG-------EEEEGEEEGE--EEGEGEEEGEGEGEEEEEG 1019
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 17/236 (7%)
Query: 39 HLRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEH 98
H ++ ER ++ G+ + P E G++E ++ G +Q++ E E
Sbjct: 668 HWQDEEREKGEKDKGRGEMER-PGE---GEKELAEKEEWKKRDGEEQEQKEREQGHQKER 723
Query: 99 GVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPE 158
E+G E+ EHG ++E+G + + G +EE E+ + + E
Sbjct: 724 NQEMEEGGEE----EHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEE 779
Query: 159 DASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGV-DQEEDGPEDASPTE 217
A E G ++ + G + TE G ++EE G + E G ++EE+ E E
Sbjct: 780 RAGKEEKGEEEGDQGEGEEEETE-GRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEE 838
Query: 218 HGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAG 273
G +E+ E G +E+G E G +E+G E E G G
Sbjct: 839 EGEGEEEEGEGEEEEGEGKGEEEG-------EEGEGEEEGEEGEGEGEEEEGEGEG 887
Score = 63.2 bits (152), Expect = 1e-09
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 25/249 (10%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVN 101
E ++R + + + E + EE G E EHG ++E+G + + G
Sbjct: 701 EWKKRDGEEQEQKEREQGHQKERNQEMEEGGEE-----EHGEGEEEEGDREEEEEKEGEG 755
Query: 102 QEDGPEDASPTEHGVDQQEDGPED-ARPTEHGIDQEEDGPEDASLTE-HGVDQQEDGPED 159
+E+G + E ++ E E+ A E G ++ + G + TE G +++E G +
Sbjct: 756 KEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVE 815
Query: 160 ASPTEHGI----DQEEDG--PEDASPTEHEHGVDQEEDGP-------EDASPTEHGVDQE 206
E G ++EE+G E+ E E G +EE+G E+ E G + E
Sbjct: 816 GGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGE 875
Query: 207 EDGPEDASPTEHGVDQEDGPEDARPTE-HGVDQEDGPEDARPTE-HGVDQEDGPEDASRT 264
+G E+ G +E+G + E G +E+G + E G +E+G E
Sbjct: 876 GEGEEEEG---EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEG 932
Query: 265 EHGVGHRAG 273
E G G
Sbjct: 933 EEEEGEGEG 941
Score = 63.2 bits (152), Expect = 1e-09
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 20/244 (8%)
Query: 42 ETERRSSQRRA------ELGDCDASPTEHDVG----QEEDGPEDASPTEHGVDQQEDGPE 91
E ER+ +R E GD E G +EE G + E G ++E+ E
Sbjct: 772 EGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEE 831
Query: 92 DASPTE---HGVNQEDGPEDASPTEHGVDQQEDGPEDARPTE-HGIDQEEDGPEDASLTE 147
+ E G +E E+ G ++ E+G + E G +EE+G +
Sbjct: 832 EGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEG 891
Query: 148 HGVDQQEDGPEDASPTEHGIDQEEDGP-EDASPTEHEHGVDQEEDGPEDASPTEHGVDQE 206
G ++E+G + G +EE+G + E G +EE+G + E G +E
Sbjct: 892 EGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGE-GEGEE 950
Query: 207 EDGPEDASPTE-HGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
E+G + E G +E+G + E ++E+G + E +E+G E+ E
Sbjct: 951 EEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEE---GEEEGEEEGEGEE 1007
Query: 266 HGVG 269
G G
Sbjct: 1008 EGEG 1011
Score = 62.4 bits (150), Expect = 2e-09
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 14/236 (5%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQE--DGPEDASPTEHG 99
E E +R E + + E + +EE E+ G ++ E +G E+ E
Sbjct: 818 EVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGE 877
Query: 100 VNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED 159
+E+G + G ++E+G + G +EE+G + E G + + +G E+
Sbjct: 878 GEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEG--EGKGEEEGEEGEGEGEEE 935
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHG 219
E G D E +G E+ E E EE+G + G +E +G + E
Sbjct: 936 EGEGE-GEDGEGEGEEEEGEWEGE-----EEEGEGEGEEEGEGEGEEGEGEGEEEEGEGE 989
Query: 220 VDQEDGPEDARPTEHGVDQEDGPEDARPTEHG-VDQE-DGPEDASRTEHGVGHRAG 273
++E+G E+ E G +E+G + E G V+ E +G E E G G
Sbjct: 990 GEEEEGEEEGE--EEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEG 1043
Score = 61.6 bits (148), Expect = 3e-09
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 9/239 (3%)
Query: 44 ERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQE 103
E + E GD + + G+EE E+ + + E A E G +
Sbjct: 732 EEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEG 791
Query: 104 D-GPEDASPTE-HGVDQQEDGPEDARPTEHGI-DQEEDGPEDASLTEHGVDQQEDGPEDA 160
D G + TE G +++E G + E G ++EE+ E E G ++E+G +
Sbjct: 792 DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEE 851
Query: 161 SPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGV 220
E ++E + E E G +EE+G + G +EE+G + G
Sbjct: 852 EEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGE 911
Query: 221 DQED-----GPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE-HGVGHRAG 273
+E+ G E+ E ++E+G + E ++E+G + E G G G
Sbjct: 912 GEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEG 970
Score = 61.6 bits (148), Expect = 3e-09
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 17/238 (7%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTE--------HGVDQQEDGPEDA 93
E E +R E G+ E G+EE G E+ E G +++E G +
Sbjct: 760 EGEEVEGEREKEEGE---RKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEG 816
Query: 94 SPTEHGVNQ--EDGPEDASPTEHGVDQQEDGPEDARPTE-HGIDQEEDGP-EDASLTEHG 149
E G + E+ E E G ++E+G + E G ++ E+G E+ G
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEG 876
Query: 150 VDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGP-EDASPTEHGVDQEED 208
++E+G + G +EE+G + G ++E +G E+ G +EE+
Sbjct: 877 EGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE 936
Query: 209 GPEDASPTEHGVDQEDGPEDARPTE-HGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
G + E ++E+G + E G +E+G + E ++E+G + E
Sbjct: 937 GEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEE 994
Score = 61.6 bits (148), Expect = 3e-09
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 17/232 (7%)
Query: 41 RETERRSSQRRAELGDCDASPTEHDVGQEEDGP---EDASPTEHGVDQQEDGPEDASPTE 97
RE E + E G+ + E G+EE+G E+ G ++ E+G + E
Sbjct: 826 REEEEEEGEGEEEEGEGEEEEGE---GEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEE 882
Query: 98 -HGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASL--TEHGVDQQE 154
G +E+G + E + +E+G + E EE+G E E G + E
Sbjct: 883 GEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGE 942
Query: 155 DGPEDASPTEHGIDQEEDGPEDASPTEHE-HGVDQEEDGPEDASPTEHGVDQEEDGPEDA 213
DG + E + EE+ E E E G + E +G E+ G +EE+G E+
Sbjct: 943 DGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEG---EGEGEEEEGEEEG 999
Query: 214 SPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
E G +E+G + E G + +G + E ++E+G E+ E
Sbjct: 1000 E--EEGEGEEEGEGEGEEEEEG--EVEGEVEGEEGEGEGEEEEGEEEGEERE 1047
Score = 61.6 bits (148), Expect = 3e-09
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 13/229 (5%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTE-HGV 100
E E + E G+ + E + EE+G + E + +E+G + E G
Sbjct: 861 EGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGK 920
Query: 101 NQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDA 160
+E+G E G ++E+G + E G +EE+G + E + +E+G +
Sbjct: 921 GEEEGEEG-----EGEGEEEEGEGEGEDGE-GEGEEEEGEWEGEEEEGEGEGEEEGEGEG 974
Query: 161 SPTEHGIDQEE---DGPEDASPTEHEHGVDQEEDGPEDASPTEHG-VDQEEDGPEDASPT 216
E ++EE +G E+ E E + EE+G + E G V+ E +G E
Sbjct: 975 EEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEG 1034
Query: 217 EHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
E +E+G E + E ++ + E+ E G QE G E+ R +
Sbjct: 1035 EEEEGEEEGEEREKEGEGEENRRNREEEEE--EEGKYQETGEEENERQD 1081
Score = 61.2 bits (147), Expect = 4e-09
Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 45/252 (17%)
Query: 60 SPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQE----------DGPEDA 109
S E ++ +E++G ED+ +G+++QE + + HG +E D E +
Sbjct: 580 SDEEVEIPEEKEGAEDSKG--NGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVS 637
Query: 110 SPTEHGVDQQEDGPED---------ARPTEHGIDQE-EDGPEDASLTE------------ 147
V + EDGPE + EH D+E E G +D E
Sbjct: 638 EGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELA 697
Query: 148 --------HGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPT 199
G +Q++ E E + EE G E+ E E G D+EE+ ++
Sbjct: 698 EKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEG-DREEEEEKEGEGK 756
Query: 200 EHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPE 259
E G +E +G + E ++ G E+ + E G DQ +G E+ +E G
Sbjct: 757 EEGEGEEVEGEREKEEGERKKEERAGKEE-KGEEEG-DQGEGEEEETEGRGEEKEEGGEV 814
Query: 260 DASRTEHGVGHR 271
+ E G G R
Sbjct: 815 EGGEVEEGKGER 826
Score = 61.2 bits (147), Expect = 4e-09
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 32/234 (13%)
Query: 66 VGQEEDGPED---------ASPTEHGVDQQ-EDGPEDASPTEHGVNQEDGPEDASPTE-- 113
VG+ EDGPE +S EH D++ E G +D E E E A E
Sbjct: 644 VGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWK 703
Query: 114 --HGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEE 171
G +Q++ E E + EE G E EHG ++E+G + + G +EE
Sbjct: 704 KRDGEEQEQKEREQGHQKERNQEMEEGGEE-----EHGEGEEEEGDREEEEEKEGEGKEE 758
Query: 172 -DGPEDASPTEHEHG-------VDQEEDGPEDASPTEHGVDQEEDG----PEDASPTEHG 219
+G E E E G +EE G E+ E G ++E +G E+ E G
Sbjct: 759 GEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGE-GEEEETEGRGEEKEEGGEVEGG 817
Query: 220 VDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAG 273
+E E E G +E+ E G ++E + E G G G
Sbjct: 818 EVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEG 871
Score = 59.7 bits (143), Expect = 1e-08
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 17/225 (7%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGP---EDASPTEH 98
E E + E G+ + G+EE+G + G ++E+G E+
Sbjct: 870 EGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGE 929
Query: 99 GVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPE 158
G +E+ E G ++E+G + E + EE+G + E G ++E+G E
Sbjct: 930 GEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGE-GEGEEEEG-E 987
Query: 159 DASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTE----HGVDQEEDGPEDAS 214
E G EE+G E+ E G +EE+ E E G +EE+G E+
Sbjct: 988 GEGEEEEG---EEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGE 1044
Query: 215 PTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPE 259
E + +G E+ R E ++E ++ E+ +++DG E
Sbjct: 1045 ERE---KEGEGEENRRNREEEEEEEGKYQETGEEEN--ERQDGEE 1084
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 62.8 bits (151), Expect = 1e-09
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQ-EEDGPEDASPTEHGVDQQEDGPEDASPTEHGV 100
E + + + E +A +E ++ + +E+ EDA TE G +++E + E
Sbjct: 73 EEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDA--TEKGGEKKEAVAAEVKNEEEDQ 130
Query: 101 NQEDGPEDASPTEHGV-DQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED 159
+++ ++ E G D+ E G EEDG ED + E G D +E ED
Sbjct: 131 KEDEEDQNEEKGEAGKEDKDEKG-------------EEDGKEDKNGNEKGEDAKE--KED 175
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHG 219
E G EDG E + E + DG E+ E G D++E +D E
Sbjct: 176 GKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKG-DKKEG--KDVKVKEDE 232
Query: 220 VDQEDGPEDARPTEHGVDQEDG--PEDARPTEHGVDQEDGPEDASRTE 265
++EDG ED E G ++E G ED + E G ++++ ED + E
Sbjct: 233 KEREDGKED----EGGNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKE 276
Score = 61.6 bits (148), Expect = 3e-09
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 62 TEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQED 121
T+ + EED E+A E + + AS E +E+ EDA TE G +++E
Sbjct: 66 TKQEAVVEEDYNENAKNGEAKITEAP-----ASEKEIVEVKEENIEDA--TEKGGEKKEA 118
Query: 122 GPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTE 181
+ + E ++E+ + D+ E G ED ++G ++ ED E +
Sbjct: 119 VAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKK 178
Query: 182 HEHGVDQEEDGPEDASPTEHGVDQEE--DGPEDASPTEHGVDQEDGPEDARPTEHGVDQE 239
E G EDG E + D++E DG E+ E G D+++G +D + E ++E
Sbjct: 179 GEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKG-DKKEG-KDVKVKEDEKERE 236
Query: 240 DGPEDARPTEHGVDQEDG--PEDASRTEHG 267
DG ED E G ++E G ED E G
Sbjct: 237 DGKED----EGGNEEEAGKEKEDLKEEEEG 262
Score = 55.8 bits (133), Expect = 2e-07
Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 41 RETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGV 100
+E E ++ + E G D D EEDG ED + E G D +E ED E G
Sbjct: 131 KEDEEDQNEEKGEAGKEDK-----DEKGEEDGKEDKNGNEKGEDAKEK--EDGKKGEDGK 183
Query: 101 -NQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED 159
N EDG E + D++E G D + E G ++ + + ++EDG ED
Sbjct: 184 GNGEDGKEKGEDEKEEEDRKETG--DGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKED 241
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTE 200
G ++EE G E E E G +++E +D E
Sbjct: 242 -----EGGNEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKEE 277
Score = 55.5 bits (132), Expect = 2e-07
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 44 ERRSSQRRAELGDCDASPTEHDVGQE--EDGPEDASPTEHGVDQQEDGPEDASPTEHGVN 101
+R SS R+ + T+ D+ +E + + + T+ +ED E+A E +
Sbjct: 37 KRTSSSRKMK--------TKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKIT 88
Query: 102 QEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED-- 159
+ E + V+ +E+ EDA TE G +++E + E DQ+ED ED
Sbjct: 89 EAPASE-----KEIVEVKEENIEDA--TEKGGEKKEAVAAEVKNEEE--DQKED-EEDQN 138
Query: 160 -----ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDAS 214
A + EEDG ED + E ++EDG + +G D +E G ED
Sbjct: 139 EEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKG-EDEK 197
Query: 215 PTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVG 269
E + DG E+ E G D+++G +D + E ++EDG ED E G
Sbjct: 198 EEEDRKETGDGKENEDGKEKG-DKKEG-KDVKVKEDEKEREDGKEDEGGNEEEAG 250
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 60.1 bits (144), Expect = 9e-09
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 15/227 (6%)
Query: 65 DVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPE 124
D +EED E+ + TE ++ + + ++ + +D S + +++E +
Sbjct: 4781 DDDEEEDEEEEDNKTEETGPGMDEEDSELVAKDDNLDSGNSNKDKSQQDKKEEKEEAEAD 4840
Query: 125 DARPTEHGIDQ---EEDGPEDASLTEHGVDQQEDGPEDAS-PTEHGIDQEE-DGPEDASP 179
D E I++ E D E+ HG ++ PE P + +D E+ +G ED
Sbjct: 4841 DGGQGEDKINEQIDERDYDENEVDPYHGNQEKVPEPEALDLPDDLNLDSEDKNGGED--- 4897
Query: 180 TEHEHGVDQE----EDGPEDAS-PTEHGVDQEEDGPEDASPTE--HGVDQEDGPEDARPT 232
T++E G ++ ++ PE+A E + E D E SP E G ++D E
Sbjct: 4898 TDNEEGEEENPLEIKEKPEEAGHEAEERGETETDQNESQSPQEPEEGPSEDDKAEGEEEM 4957
Query: 233 EHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAF 279
+ G D +DG P EH +Q+ E+ + G G A F
Sbjct: 4958 DTGADDQDGDAAQHPEEHSEEQQQSVEEKDKEADEEGGENGPADQGF 5004
Score = 53.1 bits (126), Expect = 1e-06
Identities = 55/221 (24%), Positives = 81/221 (36%), Gaps = 26/221 (11%)
Query: 63 EHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPE------------DAS 110
E + + +DG + +D+++ + P HG NQE PE D+
Sbjct: 4833 EKEEAEADDGGQGEDKINEQIDERDYDENEVDPY-HG-NQEKVPEPEALDLPDDLNLDSE 4890
Query: 111 PTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQE 170
G D + E+ P E EE G E E DQ E D +
Sbjct: 4891 DKNGGEDTDNEEGEEENPLEIKEKPEEAGHEAEERGETETDQNESQSPQEPEEGPSEDDK 4950
Query: 171 EDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQ-----EEDGPEDASPTEHG-VDQED 224
+G E E + G D ++DG P EH +Q E+D D E+G DQ
Sbjct: 4951 AEGEE-----EMDTGAD-DQDGDAAQHPEEHSEEQQQSVEEKDKEADEEGGENGPADQGF 5004
Query: 225 GPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
P++ E +E PE EH + G E+ T+
Sbjct: 5005 QPQEEEEREDSDTEEQVPEALERKEHASCGQTGVENMQNTQ 5045
Score = 52.4 bits (124), Expect = 2e-06
Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 33/236 (13%)
Query: 56 DCDASPTEHDVGQEEDGPEDAS---PTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPT 112
D D + + G +E PE + P + +D ++ + + E G + P
Sbjct: 4857 DYDENEVDPYHGNQEKVPEPEALDLPDDLNLDSEDKNGGEDTDNEEGEEENPLEIKEKPE 4916
Query: 113 EHGVDQQEDGPEDARPTEHGIDQE-EDGPEDASLTEH------GVDQQEDGPEDASPTEH 165
E G + +E G + E QE E+GP + E G D Q DG P EH
Sbjct: 4917 EAGHEAEERGETETDQNESQSPQEPEEGPSEDDKAEGEEEMDTGADDQ-DGDAAQHPEEH 4975
Query: 166 GIDQEEDGPEDASPTEHEHGVD---------QEEDGPEDASPTEHGVDQEEDGPEDASPT 216
+Q++ E + E G + QEE+ ED S TE V + + E AS
Sbjct: 4976 SEEQQQSVEEKDKEADEEGGENGPADQGFQPQEEEERED-SDTEEQVPEALERKEHASCG 5034
Query: 217 EHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRA 272
+ GV+ + ++E G E EHG G DA++ E GH +
Sbjct: 5035 QTGVENMQNTQAMELAGAAPEKEQGKE-----EHG----SGAADANQAE---GHES 5078
Score = 45.8 bits (107), Expect = 2e-04
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 16/216 (7%)
Query: 65 DVGQEEDGPEDASPT-EHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGP 123
DV + E T + G ++ ++ P+ S + N + ED H + +E
Sbjct: 4688 DVSDQIGNEEQVEDTFQKGQEKDKEDPDSKSDIKGEDNAIEMSEDFDGKMHDGELEEQEE 4747
Query: 124 EDARPTEHGIDQEE-----DGPEDASLTEH---GVDQQEDGPEDASPTEH-GIDQEEDGP 174
+D + G D ++ +G E L E D++ED E+ + TE G +E+
Sbjct: 4748 DDEKSDSEGGDLDKHMGDLNGEEADKLDERLWGDDDEEEDEEEEDNKTEETGPGMDEEDS 4807
Query: 175 EDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEH 234
E + ++ + +D + E + +DG + +D+ D E+ H
Sbjct: 4808 ELVAKDDNLDSGNSNKDKSQQDKKEEKEEAEADDGGQGEDKINEQIDERDYDENEVDPYH 4867
Query: 235 GVDQEDGPEDAR---PTEHGVDQED--GPEDASRTE 265
G +QE PE P + +D ED G ED E
Sbjct: 4868 G-NQEKVPEPEALDLPDDLNLDSEDKNGGEDTDNEE 4902
Score = 32.0 bits (71), Expect = 2.5
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 29/149 (19%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDV--GQEE--------DGPEDASPTEHGVDQQ----- 86
ET++ SQ E + P+E D G+EE DG P EH +QQ
Sbjct: 4929 ETDQNESQSPQEP---EEGPSEDDKAEGEEEMDTGADDQDGDAAQHPEEHSEEQQQSVEE 4985
Query: 87 ------EDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGID--QEED 138
E+G E+ + QE+ + S TE V + + E A + G++ Q
Sbjct: 4986 KDKEADEEGGENGPADQGFQPQEEEEREDSDTEEQVPEALERKEHASCGQTGVENMQNTQ 5045
Query: 139 GPEDASLT---EHGVDQQEDGPEDASPTE 164
E A E G ++ G DA+ E
Sbjct: 5046 AMELAGAAPEKEQGKEEHGSGAADANQAE 5074
>gi|109637791 transcription factor-like nuclear regulator [Homo
sapiens]
Length = 2624
Score = 59.7 bits (143), Expect = 1e-08
Identities = 70/258 (27%), Positives = 99/258 (38%), Gaps = 50/258 (19%)
Query: 53 ELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPT 112
E G SP E+ G EE P D T+ +E P + +P +E D T
Sbjct: 986 ETGRRKISPREN--GPEEVKPVDEMETDLNATGRESSPREKTPEVIDATEEI---DLEET 1040
Query: 113 EHGVDQQEDGPEDARP--------------------TEHGIDQEEDGPEDASLTEHGVDQ 152
E V QE+G E+ +P T ID E+ D TE +
Sbjct: 1041 EREVSPQENGLEEVKPLGEMETDLKATGRDSFPRGKTPEVIDAIEEIEIDLEETEREISP 1100
Query: 153 QEDGPEDASP----------TEHGIDQEEDGPEDASPTEH---------EHGVDQEEDGP 193
QE+G E+ P T I E PE TE + EE+GP
Sbjct: 1101 QENGLEEVKPLGEMQTDLKATGREISPREKTPEVIDATEEIDKDLEETGRREISPEENGP 1160
Query: 194 EDASPT-EHGVDQEEDGPEDAS--PTEHGVDQEDGPE-DARPTEHGVD-QEDGPEDARPT 248
E+ P E D + G E +S T +D + E D TE + QE+GPE+ +P
Sbjct: 1161 EEVKPVDEMETDLKTTGREGSSREKTREVIDAAEVIETDLEETEREISPQENGPEEVKPV 1220
Query: 249 -EHGVDQEDGPEDASRTE 265
+ D ++ E+ S+ E
Sbjct: 1221 GKMETDLKEIREEISQRE 1238
Score = 56.6 bits (135), Expect = 9e-08
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 40 LRETERRSSQRRAE------LGDCDASPTEHDVGQEEDGPEDASP-----TEHGVDQQED 88
L T R SS R + D TE +V +E+G E+ P T+ ++
Sbjct: 1012 LNATGRESSPREKTPEVIDATEEIDLEETEREVSPQENGLEEVKPLGEMETDLKATGRDS 1071
Query: 89 GPEDASPT------EHGVNQEDGPEDASPTEHGVDQQEDGPE---DARPTEHGIDQEEDG 139
P +P E ++ E+ + SP E+G+++ + E D + T I E
Sbjct: 1072 FPRGKTPEVIDAIEEIEIDLEETEREISPQENGLEEVKPLGEMQTDLKATGREISPREKT 1131
Query: 140 PE--------DASLTEHG---VDQQEDGPEDASPT-EHGIDQEEDGPEDASPTEHEHGVD 187
PE D L E G + +E+GPE+ P E D + G E +S + +D
Sbjct: 1132 PEVIDATEEIDKDLEETGRREISPEENGPEEVKPVDEMETDLKTTGREGSSREKTREVID 1191
Query: 188 QEEDGPEDASPTEHGVDQEEDGPEDASP 215
E D TE + +E+GPE+ P
Sbjct: 1192 AAEVIETDLEETEREISPQENGPEEVKP 1219
Score = 51.2 bits (121), Expect = 4e-06
Identities = 61/255 (23%), Positives = 97/255 (38%), Gaps = 17/255 (6%)
Query: 30 GLTAGTRIIHLRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASP-----TEHGVD 84
GL A R I LRE E+ ++ +++GPE+ P T+
Sbjct: 901 GLKAMGREICLREKTPEVIDATEEIDKDLEEAGRREISPQKNGPEEVKPLGEVETDLKAT 960
Query: 85 QQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPT-EHGIDQEEDGPEDA 143
E P + +P +E + +E+GPE+ +P E D G E +
Sbjct: 961 GNESSPREKTPEVTDATEEIDKNLEETGRRKISPRENGPEEVKPVDEMETDLNATGRESS 1020
Query: 144 --SLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASP--- 198
T +D E+ D TE + +E+G E+ P E D + G D+ P
Sbjct: 1021 PREKTPEVIDATEE--IDLEETEREVSPQENGLEEVKPL-GEMETDLKATG-RDSFPRGK 1076
Query: 199 TEHGVDQEEDGPEDASPTEHGVD-QEDGPEDARPT-EHGVDQEDGPEDARPTEHGVDQED 256
T +D E+ D TE + QE+G E+ +P E D + + P E + D
Sbjct: 1077 TPEVIDAIEEIEIDLEETEREISPQENGLEEVKPLGEMQTDLKATGREISPREKTPEVID 1136
Query: 257 GPEDASRTEHGVGHR 271
E+ + G R
Sbjct: 1137 ATEEIDKDLEETGRR 1151
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 58.9 bits (141), Expect = 2e-08
Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 24/258 (9%)
Query: 20 GCLVRRRVPGGLTAGTRIIHLRE-----TERRSSQRRAELGDCDASPTEHDVGQEEDGP- 73
G V RR P + +I T + E+ D SP V P
Sbjct: 61 GSSVARRAPKRQASSVVVIDSDSDEECHTHEEKKAKLLEINSDDESPECCHVKPAIQEPP 120
Query: 74 ----EDASPTEHGVDQQ--EDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDAR 127
+D + ++G D + +D +D+ + + + P+D S D D E
Sbjct: 121 IVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPD 180
Query: 128 PTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVD 187
D +D +D+S ++ D +D +D+ + D + D P+D+S D
Sbjct: 181 DNSDDSDVPDDNSDDSS-DDNSDDSSDDNSDDSDVPDDKSD-DSDVPDDSSDDS-----D 233
Query: 188 QEEDGPEDASPTEHGVDQEE---DGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPED 244
+D +D+ + D E D +D+ + D + P+D+ D D +D
Sbjct: 234 VPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASD--DSSDD 291
Query: 245 ARPTEHGVDQEDGPEDAS 262
+ ++ D + P+D S
Sbjct: 292 SEASDDSSDDSEAPDDKS 309
Score = 57.0 bits (136), Expect = 7e-08
Identities = 49/212 (23%), Positives = 76/212 (35%), Gaps = 8/212 (3%)
Query: 56 DCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHG 115
D +A D D D S ++ D +D +D+ + + D P+D+S
Sbjct: 175 DSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDV 234
Query: 116 VDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPE 175
D D E + + +D +D+ + D E P+D+S D D E
Sbjct: 235 PDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSE-APDDSSDDSEASDDSSDDSE 293
Query: 176 --DASPTEHEHGVDQEEDG--PEDASPTEHGVDQEEDGPEDASPTEHGVDQ---EDGPED 228
D S + E D+ +D PED S D D E P E ++ E+
Sbjct: 294 ASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAEDLCNEGQIASDEEE 353
Query: 229 ARPTEHGVDQEDGPEDARPTEHGVDQEDGPED 260
V Q D +DA + G + P D
Sbjct: 354 LVEAAAAVSQHDSSDDAGEQDLGENLSKPPSD 385
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 57.8 bits (138), Expect = 4e-08
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 15/152 (9%)
Query: 67 GQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDA 126
G+EE+ E+ E G ++E+ + E G +E G E+ E VD E+ ED
Sbjct: 405 GEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDE 464
Query: 127 RPTEHGIDQEE--DGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEH 184
+ G++ E+ G +A + QE E PT H ++ ED D+ + E
Sbjct: 465 ESSSEGLEAEDWAQGVVEAGGSFGAYGAQE---EAQCPTLHFLEGGEDSDSDSEEEDDEE 521
Query: 185 GVDQEEDGPEDASPTEHGVDQEEDGPEDASPT 216
D++ED +D EEDG E P+
Sbjct: 522 EDDEDEDDDDD----------EEDGDEVPVPS 543
Score = 50.8 bits (120), Expect = 5e-06
Identities = 60/244 (24%), Positives = 91/244 (37%), Gaps = 38/244 (15%)
Query: 73 PEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQ---------QEDGP 123
P P E GV QQ G + + +G +D S + G+ + Q P
Sbjct: 319 PGTVHPLERGVVQQVKGHYRQAMLLKAMAALEG-QDPSGLQLGLTEALHFVAAAWQAVEP 377
Query: 124 EDARPT--EHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTE 181
D E G + SL G +++E+ E+ G ++EE+G E E
Sbjct: 378 SDIAACFREAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEE-----E 432
Query: 182 HEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQED----------------G 225
E G + EE G E+ E VD +E+ ED + G++ ED
Sbjct: 433 EEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGA 492
Query: 226 PEDAR-PTEH----GVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFL 280
E+A+ PT H G D + E+ E + ED +D + G A A F
Sbjct: 493 QEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEVPVPSFGEAMAYFA 552
Query: 281 SSRR 284
+R
Sbjct: 553 MVKR 556
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 54.7 bits (130), Expect = 4e-07
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 20/178 (11%)
Query: 47 SSQRRAELGDCDASPTEHDVGQEE----DGPEDASPTEHGVDQQEDGPEDASPTEHGVNQ 102
S RR GD E+ + QEE DGP S E + QE+ E ++ V
Sbjct: 307 SQPRRDSKGDSQEDSKEN-LSQEESQNVDGPSSESSQEANLSSQENSSE----SQEEVVS 361
Query: 103 EDGPEDASPTEHGVDQQEDGPEDARPTEHGID------QEEDGPEDASLTEHGVDQQEDG 156
E ++ PT V+ QED + H + +EE ++S + + ++ +
Sbjct: 362 ESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPES 421
Query: 157 PEDA-SPTEHGIDQEEDGPEDASPTEHEHGVDQEED----GPEDASPTEHGVDQEEDG 209
PED S ++ G+ E S H D + ED++ TE EEDG
Sbjct: 422 PEDENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDG 479
Score = 53.9 bits (128), Expect = 6e-07
Identities = 59/290 (20%), Positives = 103/290 (35%), Gaps = 38/290 (13%)
Query: 55 GDCDASPTEHD--------VGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGP 106
GD D+ P D +G +ED + +E Q +D +D + ++ ED
Sbjct: 115 GDDDSGPGPKDRQEGGNSRLGSDEDSDDTIQASEESAPQGQDSAQDTTSESRELDNED-R 173
Query: 107 EDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPE-------D 159
D+ P G D ++ + G D E + + L + G+ Q D PE +
Sbjct: 174 VDSKP--EGGDSTQESESEEHWVGGGSDGESSHGDGSELDDEGM--QSDDPESIRSERGN 229
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPE-------- 211
+ G+ +E G + G Q + P + + +E+D E
Sbjct: 230 SRMNSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTME 289
Query: 212 --DASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVG 269
+ TE+ ++ G R G QED E+ E DGP S E +
Sbjct: 290 EVKSDSTENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEES--QNVDGPSSESSQEANLS 347
Query: 270 HRAGRACAAFLSSRRDNLYLSFKKANSAHVTGIISSRSDSELLDWNSKHT 319
+ S ++ + + N T + + DS+ + +S HT
Sbjct: 348 SQENS------SESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHT 391
Score = 51.2 bits (121), Expect = 4e-06
Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 25/232 (10%)
Query: 40 LRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHG 99
L E R R++ + + D D E+ D++ + D P S G
Sbjct: 259 LLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSK---G 315
Query: 100 VNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED 159
+QED E+ S E Q DGP E + +E+ E S E + + D P+
Sbjct: 316 DSQEDSKENLSQEE---SQNVDGPSSESSQEANLSSQENSSE--SQEEVVSESRGDNPD- 369
Query: 160 ASPTEHGIDQEEDGP---EDASPT-EHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASP 215
PT ++ +ED ED+S T H +EE ++S + + ++ + PED +
Sbjct: 370 --PTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENS 427
Query: 216 T------EHGVDQEDGPEDARPTEHGVDQED---GPEDARPTE-HGVDQEDG 257
+ H E E++ E D +D ED+ TE +EDG
Sbjct: 428 SSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDG 479
Score = 50.4 bits (119), Expect = 7e-06
Identities = 106/538 (19%), Positives = 190/538 (35%), Gaps = 78/538 (14%)
Query: 30 GLTAGTRIIHLRETERRSSQR-RAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQED 88
GL+ + + E S+ + L P E + +G + +S +Q +
Sbjct: 12 GLSCALPVTRYQNNESEDSEEWKGHLAQAPTPPLESS--ESSEGSKVSSE-----EQANE 64
Query: 89 GPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEH 148
P D++ +E G+ +D H + G +R T G D ++D +D+
Sbjct: 65 DPSDSTQSEEGLGSDD---------HQYIYRLAG-GFSRSTGKGGDDKDDDEDDSGDDTF 114
Query: 149 GVDQQEDGPED---ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQ 205
G D GP+D + G D++ D AS E Q +D +D + +D
Sbjct: 115 GDDDSGPGPKDRQEGGNSRLGSDEDSDDTIQAS----EESAPQGQDSAQDTTSESRELDN 170
Query: 206 EEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
E+ D+ P E G ++ + G D E D + Q D PE + R+E
Sbjct: 171 ED--RVDSKP-EGGDSTQESESEEHWVGGGSDGESSHGDGSELDDEGMQSDDPE-SIRSE 226
Query: 266 HGVGHRAGRACAAFLSSRRDNLYLSFKKANSAHVTGIISSRSDSELLDWNSKHTGEKDAL 325
G +SR ++ + K++ S+LL+ S+ K +
Sbjct: 227 RG-------------NSRMNSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSRI 273
Query: 326 FLESKCSSLAPEGNPVPQKRSRATFHSKDKENYWMNTVVLGRDLQEAAPAEPFGDTERSR 385
E S L + N + + +S +T +S ++ + + E E
Sbjct: 274 SEEDDRSEL-DDNNTMEEVKSDSTENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEESQN 332
Query: 386 AEPPLSKDFHYQAEIVTYEESLTAKHQFIQQPLTIHWEVFQSGATLPSPRGSWPCREMVV 445
+ P S + +A + + E S ++ + + +S P P S
Sbjct: 333 VDGP-SSESSQEANLSSQENSSESQEEVVS----------ESRGDNPDPTTS-------- 373
Query: 446 LTGGPMKYVQGQVMQWSLKEHQELSQHLCSEAMSYTSCCPPSLEGISRTNRKLNAPLSS- 504
YV+ Q E + S+ S +S++ + S ++ LN S
Sbjct: 374 -------YVEDQ-------EDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESP 419
Query: 505 -SAEMRRDIGQQCVCTMGSLADLPSCKASIGEQQSPEMSLSQSWEAVNGYRPKPSKAE 561
S E Q+ + + S A+ S ++ E S S+S E N K S E
Sbjct: 420 ESPEDENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEE 477
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 54.7 bits (130), Expect = 4e-07
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 20/178 (11%)
Query: 47 SSQRRAELGDCDASPTEHDVGQEE----DGPEDASPTEHGVDQQEDGPEDASPTEHGVNQ 102
S RR GD E+ + QEE DGP S E + QE+ E ++ V
Sbjct: 291 SQPRRDSKGDSQEDSKEN-LSQEESQNVDGPSSESSQEANLSSQENSSE----SQEEVVS 345
Query: 103 EDGPEDASPTEHGVDQQEDGPEDARPTEHGI------DQEEDGPEDASLTEHGVDQQEDG 156
E ++ PT V+ QED + H + +EE ++S + + ++ +
Sbjct: 346 ESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPES 405
Query: 157 PEDA-SPTEHGIDQEEDGPEDASPTEHEHGVDQEED----GPEDASPTEHGVDQEEDG 209
PED S ++ G+ E S H D + ED++ TE EEDG
Sbjct: 406 PEDENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDG 463
Score = 53.9 bits (128), Expect = 6e-07
Identities = 59/290 (20%), Positives = 103/290 (35%), Gaps = 38/290 (13%)
Query: 55 GDCDASPTEHD--------VGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGP 106
GD D+ P D +G +ED + +E Q +D +D + ++ ED
Sbjct: 99 GDDDSGPGPKDRQEGGNSRLGSDEDSDDTIQASEESAPQGQDSAQDTTSESRELDNED-R 157
Query: 107 EDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPE-------D 159
D+ P G D ++ + G D E + + L + G+ Q D PE +
Sbjct: 158 VDSKP--EGGDSTQESESEEHWVGGGSDGESSHGDGSELDDEGM--QSDDPESIRSERGN 213
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPE-------- 211
+ G+ +E G + G Q + P + + +E+D E
Sbjct: 214 SRMNSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTME 273
Query: 212 --DASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVG 269
+ TE+ ++ G R G QED E+ E DGP S E +
Sbjct: 274 EVKSDSTENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEES--QNVDGPSSESSQEANLS 331
Query: 270 HRAGRACAAFLSSRRDNLYLSFKKANSAHVTGIISSRSDSELLDWNSKHT 319
+ S ++ + + N T + + DS+ + +S HT
Sbjct: 332 SQENS------SESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHT 375
Score = 51.2 bits (121), Expect = 4e-06
Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 25/232 (10%)
Query: 40 LRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHG 99
L E R R++ + + D D E+ D++ + D P S G
Sbjct: 243 LLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSK---G 299
Query: 100 VNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED 159
+QED E+ S E Q DGP E + +E+ E S E + + D P+
Sbjct: 300 DSQEDSKENLSQEE---SQNVDGPSSESSQEANLSSQENSSE--SQEEVVSESRGDNPD- 353
Query: 160 ASPTEHGIDQEEDGP---EDASPT-EHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASP 215
PT ++ +ED ED+S T H +EE ++S + + ++ + PED +
Sbjct: 354 --PTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENS 411
Query: 216 T------EHGVDQEDGPEDARPTEHGVDQED---GPEDARPTE-HGVDQEDG 257
+ H E E++ E D +D ED+ TE +EDG
Sbjct: 412 SSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDG 463
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 54.7 bits (130), Expect = 4e-07
Identities = 59/250 (23%), Positives = 94/250 (37%), Gaps = 33/250 (13%)
Query: 41 RETERRSSQRRAELGDCD----------ASPTEHDVGQEEDGPEDASPTEHGVDQQEDGP 90
RE +R + EL D A P E D G EED E S + +++E+
Sbjct: 996 RERDRDMADTPCELAKRDPKGVGVRRRPARPLELDSGGEEDEKESLSEEQESTEEEEEAE 1055
Query: 91 EDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGV 150
E+ +ED +D S D+ E+ ED +E E D E+ +++
Sbjct: 1056 EEEE-------EEDDDDDDSDDR---DESENDDEDTALSEASEKDEGDSDEEETVSIVTS 1105
Query: 151 DQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGV------D 204
+ ++S + E P + E ++EE+ E+ E + D
Sbjct: 1106 KAEATSSSESSESSEFESSSESSPSSSEDEEEVVAREEEEEEEEEEMVAEESMASAGPED 1165
Query: 205 QEEDGPEDA-SPTEHGVDQEDGPEDARPTEHGVDQEDGPE--DARPTEHGV----DQEDG 257
E+DG E A +P VD E+ V E+ P D P GV D +
Sbjct: 1166 FEQDGEEAALAPGAPAVDSLGMEEEVDIETEAVAPEERPSMLDEPPLPVGVEEPADSREP 1225
Query: 258 PEDASRTEHG 267
PE+ ++ G
Sbjct: 1226 PEEPGLSQEG 1235
Score = 45.4 bits (106), Expect = 2e-04
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 15/174 (8%)
Query: 88 DGPEDASPTEHGVNQEDGP-EDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLT 146
D ++ S E + D P E A GV + ARP E EED E S
Sbjct: 988 DEEDEESERERDRDMADTPCELAKRDPKGVGVRR---RPARPLELDSGGEEDEKESLSEE 1044
Query: 147 EHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQE 206
+ +++E+ E+ ++EED +D S E D E+ +AS + G E
Sbjct: 1045 QESTEEEEEAEEE--------EEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDE 1096
Query: 207 EDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPED 260
E E S + E + +E E P + E V +E+ E+
Sbjct: 1097 E---ETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEVVAREEEEEE 1147
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 53.9 bits (128), Expect = 6e-07
Identities = 56/232 (24%), Positives = 88/232 (37%), Gaps = 41/232 (17%)
Query: 63 EHDVGQE---------EDGPEDASPTEHGVDQQEDGPEDAS--PTEHGVNQEDGPED--- 108
+H VG E E G + HG + ED E P+ + +D ED
Sbjct: 110 DHKVGDEGVSGEEVFAEHGGQARGHRGHGSEDTEDSAEHRHHLPSHRSHSHQDEDEDEVV 169
Query: 109 ASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGID 168
+S H + + D E ++EE+ E+ + TE+G G
Sbjct: 170 SSEHHHHILRHGHRGHDGEDDEGEEEEEEEEEEEEASTEYGHQAHR---------HRGHG 220
Query: 169 QEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPED 228
EED ED S H HG G E+ D ++D +D + V E +
Sbjct: 221 SEED--EDVSDGHHHHGPSHRHQGHEE--------DDDDDDDDDDDDDDDDVSIEYRHQA 270
Query: 229 ARPTEHGVDQEDGPEDA---RPTEH---GVDQEDGPEDASRTEHGVGHRAGR 274
R HG+++++ D R H +++D +D TE+ GH+A R
Sbjct: 271 HRHQGHGIEEDEDVSDGHHHRDPSHRHRSHEEDDNDDDDVSTEY--GHQAHR 320
Score = 53.5 bits (127), Expect = 8e-07
Identities = 78/361 (21%), Positives = 132/361 (36%), Gaps = 51/361 (14%)
Query: 39 HLRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEH 98
H + R S + + + +S H + + D E +++E+ E+ + TE+
Sbjct: 150 HHLPSHRSHSHQDEDEDEVVSSEHHHHILRHGHRGHDGEDDEGEEEEEEEEEEEEASTEY 209
Query: 99 GV---------NQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTE-- 147
G ++ED HG + G E+ + D ++D +D S+
Sbjct: 210 GHQAHRHRGHGSEEDEDVSDGHHHHGPSHRHQGHEEDDDDDDD-DDDDDDDDDVSIEYRH 268
Query: 148 -------HGVDQQED---GPEDASPTE-HGIDQEEDGPEDASPTEHEHGVDQEEDGPED- 195
HG+++ ED G P+ H +E+D +D TE+ H + +D ++
Sbjct: 269 QAHRHQGHGIEEDEDVSDGHHHRDPSHRHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEE 328
Query: 196 -----ASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHG-VDQEDGPEDA---- 245
H D G D E V E + + HG VD+E+ E+
Sbjct: 329 VEAVSGEHHHHVPDHRHQGHRDEEEDE-DVSTERWHQGPQHVHHGLVDEEEEEEEITVQF 387
Query: 246 -------RPTEHGVDQEDGPEDASRTE--HGVGHRAGRACAAFLSSRRDNLYLSFKKANS 296
+P H D+ED +D +TE H HR R +S+ + S ++++
Sbjct: 388 GHYVASHQPRGHKSDEEDF-QDEYKTEVPHHHHHRVPREEDEEVSAELGHQAPSHRQSHQ 446
Query: 297 AHVTGIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAPEGNPVPQKRSRATFHSKDKE 356
TG S E+ HT KD L S E P H +D E
Sbjct: 447 DEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEEDPGS------HEEDDE 500
Query: 357 N 357
+
Sbjct: 501 S 501
Score = 49.3 bits (116), Expect = 2e-05
Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 36/208 (17%)
Query: 64 HDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGV------- 116
H V +EED E ++ H +D T HG P H V
Sbjct: 420 HRVPREED-EEVSAELGHQAPSHRQSHQDEE-TGHGQRGSIKEMSHHPPGHTVVKDRSHL 477
Query: 117 ---DQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDG 173
D +E+ ++ P H D +E + T HG QED ++ ++QEE+
Sbjct: 478 RKDDSEEEKEKEEDPGSHEED-DESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEE 536
Query: 174 PEDASPTEHEHGVDQEEDGPEDASP--TEHGVDQEEDGPEDASPTEHGVDQED------- 224
ED E E ++ E+ E +P +H ++EE+ E G+++++
Sbjct: 537 EEDKEEEEEEEDEERREERAEVGAPLSPDHSEEEEEE--------EEGLEEDEPRFTIIP 588
Query: 225 GPEDARPTEHGVDQED------GPEDAR 246
P D R G E+ GP+DA+
Sbjct: 589 NPLDRREEAGGASSEEESGEDTGPQDAQ 616
Score = 46.2 bits (108), Expect = 1e-04
Identities = 52/220 (23%), Positives = 76/220 (34%), Gaps = 21/220 (9%)
Query: 64 HDVGQEEDGPEDASPTE--HGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQED 121
H ++E+ ED S G G D E + + G AS G E+
Sbjct: 345 HQGHRDEEEDEDVSTERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVASHQPRGHKSDEE 404
Query: 122 GPEDARPTE------HGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHG-------ID 168
+D TE H + +EED A L ++ ++ T HG +
Sbjct: 405 DFQDEYKTEVPHHHHHRVPREEDEEVSAELGHQAPSHRQSHQDEE--TGHGQRGSIKEMS 462
Query: 169 QEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGV-DQEDGPE 227
G H D EE+ ++ P H D +E + T HG DQED E
Sbjct: 463 HHPPGHTVVKDRSHLRKDDSEEEKEKEEDPGSHEED-DESSEQGEKGTHHGSRDQED--E 519
Query: 228 DARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHG 267
+ HG+ E+ E ++ED R E G
Sbjct: 520 EDEEEGHGLSLNQEEEEEEDKEEEEEEEDEERREERAEVG 559
Score = 45.4 bits (106), Expect = 2e-04
Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 17/165 (10%)
Query: 28 PGGLTAGTRIIHLRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQE 87
P G T HLR+ + + + E D E D E G + T HG QE
Sbjct: 465 PPGHTVVKDRSHLRKDDSEEEKEKEE----DPGSHEEDDESSEQGEKG---THHGSRDQE 517
Query: 88 DGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTE 147
D ++ +NQE+ E+ E +++ED E G D E+ E
Sbjct: 518 DEEDEEEGHGLSLNQEEEEEEDKEEE---EEEEDEERREERAEVGAPLSPDHSEEEEEEE 574
Query: 148 HGVDQQE------DGPEDASPTEHGIDQEEDGPEDASPTE-HEHG 185
G+++ E P D G EE+ ED P + E+G
Sbjct: 575 EGLEEDEPRFTIIPNPLDRREEAGGASSEEESGEDTGPQDAQEYG 619
Score = 44.3 bits (103), Expect = 5e-04
Identities = 42/211 (19%), Positives = 79/211 (37%), Gaps = 17/211 (8%)
Query: 77 SPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQE 136
SP +H + ++ E+ ++E ED S E+G +D + + G+ E
Sbjct: 63 SPRDHPDENKDVSTENGHHFWSHPDREKEDEDVSK-EYGHLLPGHRSQDHKVGDEGVSGE 121
Query: 137 E----DGPEDASLTEHGVDQQEDGPEDAS--PTEHGIDQEEDGPEDASPTEHEHGVDQEE 190
E G + HG + ED E P+ +++ ++ +EH H + +
Sbjct: 122 EVFAEHGGQARGHRGHGSEDTEDSAEHRHHLPSHRSHSHQDEDEDEVVSSEHHHHILRHG 181
Query: 191 DGPEDASPTEHGVDQEEDGPEDASPTE----------HGVDQEDGPEDARPTEHGVDQED 240
D E ++EE+ E+ + TE HG ++++ D +
Sbjct: 182 HRGHDGEDDEGEEEEEEEEEEEEASTEYGHQAHRHRGHGSEEDEDVSDGHHHHGPSHRHQ 241
Query: 241 GPEDARPTEHGVDQEDGPEDASRTEHGVGHR 271
G E+ + D +D +D S HR
Sbjct: 242 GHEEDDDDDDDDDDDDDDDDVSIEYRHQAHR 272
Score = 40.4 bits (93), Expect = 0.007
Identities = 56/261 (21%), Positives = 95/261 (36%), Gaps = 52/261 (19%)
Query: 64 HDVGQEEDGPED---------ASPTEHGVDQQEDGPEDASPTE------HGVNQEDGPED 108
H + EE+ E+ AS G E+ +D TE H V +E+ E
Sbjct: 371 HGLVDEEEEEEEITVQFGHYVASHQPRGHKSDEEDFQDEYKTEVPHHHHHRVPREEDEEV 430
Query: 109 ASPTEHGVDQQEDGPEDARPTEHG----IDQEEDGPEDASLTEHGVDQQEDGPEDASPTE 164
++ H +D T HG I + P ++ + ++D E+ E
Sbjct: 431 SAELGHQAPSHRQSHQDEE-TGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKE 489
Query: 165 H--GIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQ 222
G +E+D + HG +ED ++ ++QEE+ ED E D+
Sbjct: 490 EDPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEEEEEEDE 549
Query: 223 EDGPEDARP--------TEHGVDQEDGPEDARP-------------------TEHGVDQE 255
E E A +E ++E+G E+ P +E ++
Sbjct: 550 ERREERAEVGAPLSPDHSEEEEEEEEGLEEDEPRFTIIPNPLDRREEAGGASSEEESGED 609
Query: 256 DGPEDASRTEHGVGHRAGRAC 276
GP+DA E+G ++ G C
Sbjct: 610 TGPQDAQ--EYG-NYQPGSLC 627
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 53.5 bits (127), Expect = 8e-07
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 14/193 (7%)
Query: 68 QEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQE--------DGPEDASPTEHGVDQQ 119
+E D +D P ++ +E E + + +E + P++ T G +
Sbjct: 846 EEVDVTKDIKPQLELIEDEEKLKETEPVEAYVIQKEREVTKGPAESPDEGITTTEGEGEC 905
Query: 120 EDGPEDARPTE-HGIDQEEDGPEDASLTEHGVDQQEDGP-EDASPTEHGIDQEEDGPEDA 177
E PE+ P E G+D E ++ + E + E G E+ + TE + EEDG E
Sbjct: 906 EQTPEELEPVEKQGVDDIEKFEDEGAGFE---ESSETGDYEEKAETEEAEEPEEDGEEHV 962
Query: 178 SPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVD 237
+ +H ++E+ + A + ++ E E +D+ +A +E D
Sbjct: 963 CVSASKHSPTEDEESAK-AEADAYIREKRESVASGDDRAEEDMDEAIEKGEAEQSEEEAD 1021
Query: 238 QEDGPEDARPTEH 250
+ED EDAR E+
Sbjct: 1022 EEDKAEDAREEEY 1034
Score = 50.1 bits (118), Expect = 9e-06
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 16/206 (7%)
Query: 73 PEDASPTEHGVDQQE-DGPEDASPTEHGVNQEDGPEDASPTEHGVDQQE--------DGP 123
PED + + +E D +D P + E+ ++ P E V Q+E + P
Sbjct: 833 PEDLTKDFEELKAEEVDVTKDIKPQLELIEDEEKLKETEPVEAYVIQKEREVTKGPAESP 892
Query: 124 EDARPTEHGIDQEEDGPEDASLTE-HGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEH 182
++ T G + E PE+ E GVD E ++ + G ++ + + E
Sbjct: 893 DEGITTTEGEGECEQTPEELEPVEKQGVDDIEKFEDEGA----GFEESSETGDYEEKAET 948
Query: 183 EHGVDQEEDGPEDA--SPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQED 240
E + EEDG E S ++H ++E+ + + +E E +D+
Sbjct: 949 EEAEEPEEDGEEHVCVSASKHSPTEDEESAKAEADAYIREKRESVASGDDRAEEDMDEAI 1008
Query: 241 GPEDARPTEHGVDQEDGPEDASRTEH 266
+A +E D+ED EDA E+
Sbjct: 1009 EKGEAEQSEEEADEEDKAEDAREEEY 1034
Score = 32.3 bits (72), Expect = 1.9
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 16/202 (7%)
Query: 47 SSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPE--DASPTEHGVNQED 104
S+ + + D +++ E D E AS + + ++ E +A +E ++ED
Sbjct: 965 SASKHSPTEDEESAKAEADAYIREKRESVASGDDRAEEDMDEAIEKGEAEQSEEEADEED 1024
Query: 105 GPEDASPTEHGVDQQEDGPED------ARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPE 158
EDA E+ ++ E ED + E G +E+ G + G Q G E
Sbjct: 1025 KAEDAREEEYEPEKME--AEDYVMAVVDKAAEAGGAEEQYGFLTTPTKQLGA--QSPGRE 1080
Query: 159 DASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVD-QEEDGPEDASPTE 217
AS + H +A+ ++ E+ DQ E+ + T+ ++ E P D T
Sbjct: 1081 PAS-SIHDETLPGGSESEATASDEENREDQPEEFTATSGYTQSTIEISSEPTPMDEMSTP 1139
Query: 218 HGV--DQEDGPEDARPTEHGVD 237
V D+ + E P++ V+
Sbjct: 1140 RDVMSDETNNEETESPSQEFVN 1161
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 53.5 bits (127), Expect = 8e-07
Identities = 45/205 (21%), Positives = 78/205 (38%), Gaps = 16/205 (7%)
Query: 68 QEEDGPEDASPTE----HGVDQQEDGPE-DASPTEHGVNQEDGPEDASPTEHGVDQQEDG 122
++E+ P+ S + G DQ DG AS E + GP H ++
Sbjct: 15 EDEEQPQGLSDDDILRDSGSDQDLDGAGVRASDLEDEESAARGPSQEEEDNHSDEEDRAS 74
Query: 123 PEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEH 182
++ + +++ GP + E G + +ED D + +E D
Sbjct: 75 EPKSQDQDSEVNELSRGPTSSPCEEEGDEGEEDRTSDLRDEASSVTRELD---------- 124
Query: 183 EHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGP 242
EH +D +E+ PE+ +P + E+ G ED G +E+G + E
Sbjct: 125 EHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGTPREEGKAGVQSVGEKESLEAAK 184
Query: 243 EDARPTEHGVDQEDGPEDASRTEHG 267
E + + G + +DG D E G
Sbjct: 185 EKKKEDDDG-EIDDGEIDDDDLEEG 208
Score = 38.5 bits (88), Expect = 0.027
Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 17/164 (10%)
Query: 41 RETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGV 100
+E E S + + + +V + GP + E G + +ED D V
Sbjct: 60 QEEEDNHSDEEDRASEPKSQDQDSEVNELSRGPTSSPCEEEGDEGEEDRTSDLRDEASSV 119
Query: 101 NQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDA 160
+E EH +D E+ PE+ P + E+ G ED G ++E
Sbjct: 120 TRE-------LDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGTPREEG----- 167
Query: 161 SPTEHGIDQ--EEDGPEDASPTEHEHGVDQEEDGPEDASPTEHG 202
+ G+ E++ E A + E + +DG D E G
Sbjct: 168 ---KAGVQSVGEKESLEAAKEKKKEDDDGEIDDGEIDDDDLEEG 208
Score = 34.7 bits (78), Expect = 0.38
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Query: 44 ERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQE 103
E R+S R E EH++ +E+ PE+ +P + ++ G ED G +E
Sbjct: 106 EDRTSDLRDEASSVTRELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGTPRE 165
Query: 104 DGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPT 163
+G A G + + ++ + + + ++ +D L E V D PT
Sbjct: 166 EG--KAGVQSVGEKESLEAAKEKKKEDDDGEIDDGEIDDDDLEEGEVKDPSDRKVRPRPT 223
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 52.0 bits (123), Expect = 2e-06
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 106 PEDASP-TEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTE 164
P+ P T G +D +D P D+EED P E + P++ ++
Sbjct: 177 PQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSD 236
Query: 165 HG---IDQEEDGPEDASPTEHEHGVDQEEDGPE--DASPTEHGVDQEEDGPEDASPTEHG 219
G +Q+E+G ED + E D++ED D+ P E D+EE+G ED E G
Sbjct: 237 EGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED----EEG 292
Query: 220 VDQEDGPEDARPTEHGV 236
+ +DG E E G+
Sbjct: 293 -EGDDGYEQISSDEDGI 308
Score = 44.7 bits (104), Expect = 4e-04
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 63 EHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQE-- 120
E D ED E SP + V Q+ ++ E QE+G ED E VD +E
Sbjct: 208 EEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEE--QQEEGEED----EDDVDVEEEE 261
Query: 121 DGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGI 167
D ED R T I +EE+ E+ E + +DG E S E GI
Sbjct: 262 DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGI 308
Score = 40.0 bits (92), Expect = 0.009
Identities = 45/168 (26%), Positives = 64/168 (38%), Gaps = 29/168 (17%)
Query: 123 PEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEH 182
P +P+ + DG ++ Q GP T G +D +D P
Sbjct: 148 PPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPR----TPPGPPPPDDDEDDPVPLPV 203
Query: 183 EHGVDQEEDGP------EDASPTEHGVDQ----------EEDGPEDASPTEHGVD---QE 223
D+EED P E SP + V Q EE+ E+ E VD +E
Sbjct: 204 SG--DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEE 261
Query: 224 DGPEDARPTEHGV---DQEDGPEDARPTEHGVDQEDGPEDASRTEHGV 268
D ED R T + ++ED E+ E G + +DG E S E G+
Sbjct: 262 DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEG-EGDDGYEQISSDEDGI 308
Score = 37.7 bits (86), Expect = 0.045
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 60 SPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQ 119
SP + V QE ++ E +QQE+G ED + +ED ED T + ++
Sbjct: 222 SPDRNSVPQEGQYSDEGEVEE---EQQEEGEEDEDDVDVE-EEEDEDEDDRRTVDSIPEE 277
Query: 120 EDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQE 154
E+ E+ E + +DG E S E G+ E
Sbjct: 278 EEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLE 312
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 52.0 bits (123), Expect = 2e-06
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 106 PEDASP-TEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTE 164
P+ P T G +D +D P D+EED P E + P++ ++
Sbjct: 177 PQPRGPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSD 236
Query: 165 HG---IDQEEDGPEDASPTEHEHGVDQEEDGPE--DASPTEHGVDQEEDGPEDASPTEHG 219
G +Q+E+G ED + E D++ED D+ P E D+EE+G ED E G
Sbjct: 237 EGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEED----EEG 292
Query: 220 VDQEDGPEDARPTEHGV 236
+ +DG E E G+
Sbjct: 293 -EGDDGYEQISSDEDGI 308
Score = 44.7 bits (104), Expect = 4e-04
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 63 EHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQE-- 120
E D ED E SP + V Q+ ++ E QE+G ED E VD +E
Sbjct: 208 EEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEE--QQEEGEED----EDDVDVEEEE 261
Query: 121 DGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGI 167
D ED R T I +EE+ E+ E + +DG E S E GI
Sbjct: 262 DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGI 308
Score = 40.0 bits (92), Expect = 0.009
Identities = 45/168 (26%), Positives = 64/168 (38%), Gaps = 29/168 (17%)
Query: 123 PEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEH 182
P +P+ + DG ++ Q GP T G +D +D P
Sbjct: 148 PPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPR----TPPGPPPPDDDEDDPVPLPV 203
Query: 183 EHGVDQEEDGP------EDASPTEHGVDQ----------EEDGPEDASPTEHGVD---QE 223
D+EED P E SP + V Q EE+ E+ E VD +E
Sbjct: 204 SG--DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEE 261
Query: 224 DGPEDARPTEHGV---DQEDGPEDARPTEHGVDQEDGPEDASRTEHGV 268
D ED R T + ++ED E+ E G + +DG E S E G+
Sbjct: 262 DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEG-EGDDGYEQISSDEDGI 308
Score = 37.7 bits (86), Expect = 0.045
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 60 SPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQ 119
SP + V QE ++ E +QQE+G ED + +ED ED T + ++
Sbjct: 222 SPDRNSVPQEGQYSDEGEVEE---EQQEEGEEDEDDVDVE-EEEDEDEDDRRTVDSIPEE 277
Query: 120 EDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQE 154
E+ E+ E + +DG E S E G+ E
Sbjct: 278 EEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLE 312
>gi|46409304 glutamate-rich 1 [Homo sapiens]
Length = 443
Score = 52.0 bits (123), Expect = 2e-06
Identities = 49/152 (32%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 90 PEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPE--DASLT- 146
PED+S GV + + E GVD E+ P A + +EEDG + + LT
Sbjct: 192 PEDSSNEGEGVGE-------ACEEDGVDTSEEDPTLAGEEDVKDTREEDGADASEEDLTR 244
Query: 147 ---EHGVDQQEDGPEDASPT-------EHGIDQ-EED----GPEDASPTEHEHGVDQEED 191
E G D E+ P A E G+D EED G ED T E G D E+
Sbjct: 245 ARQEEGADASEEDPTPAGEEDVKDAREEDGVDTIEEDLTRAGEEDGKDTREEDGADASEE 304
Query: 192 GPEDASPTEHGVDQEEDGPEDASPTEHGVDQE 223
P A E G D E+ DAS + + E
Sbjct: 305 DPTWAG-EEEGADSGEEDGADASEEDDTITNE 335
Score = 48.1 bits (113), Expect = 3e-05
Identities = 58/201 (28%), Positives = 79/201 (39%), Gaps = 33/201 (16%)
Query: 140 PEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGP-----EDASPTEHEHGVDQEEDGPE 194
PED+S GV + + E G+D E+ P ED T E G D E+
Sbjct: 192 PEDSSNEGEGVGEACE--------EDGVDTSEEDPTLAGEEDVKDTREEDGADASEEDLT 243
Query: 195 DASPTEHGVDQEED----GPEDASPT--EHGVD--QED----GPEDARPT--EHGVDQED 240
A E EED G ED E GVD +ED G ED + T E G D +
Sbjct: 244 RARQEEGADASEEDPTPAGEEDVKDAREEDGVDTIEEDLTRAGEEDGKDTREEDGADASE 303
Query: 241 GPEDARPTEHGVD--QEDGPEDASRTEHGVGHRAGRACAAFLSSRRDNLYLSFKKANSAH 298
E G D +EDG DAS + + + + FL S ++ + F S
Sbjct: 304 EDPTWAGEEEGADSGEEDG-ADASEEDDTITNEKAHSILNFLKSTQE---MYFYDGVSRD 359
Query: 299 VTGIISSRSDSELLDWNSKHT 319
+ + ELLD + H+
Sbjct: 360 AASAALADAAEELLDRLASHS 380
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 49.7 bits (117), Expect = 1e-05
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 37/217 (17%)
Query: 41 RETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGV 100
+E E + S +E + + + GQ+ D + P ++ED + AS E G
Sbjct: 141 KEAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDA-KTASQEETGQ 199
Query: 101 NQE---DGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGP 157
+E + E A+ E + Q+ ED E +E DG E+A +HG ++ D
Sbjct: 200 RKECSTEPKEKATDEEAKAESQKAVVEDEAKAE---PKEPDGKEEA---KHGAKEEADAK 253
Query: 158 EDA---------SPT---EHGIDQEEDG--------PED--ASPTEHEHGVDQEEDGPED 195
E+A SP+ E +++E +G PE+ SPT H + + GP+
Sbjct: 254 EEAEDAEEAEPGSPSEEQEQDVEKEPEGGAGVIPSSPEEWPESPTGEGHNLSTDGLGPDC 313
Query: 196 ASPTEHGVDQEEDGPEDA--SPTE---HGVDQEDGPE 227
+ + E P D SP E G +E PE
Sbjct: 314 VASGQTSPSASESSPSDVPQSPPESPSSGEKKEKAPE 350
Score = 47.8 bits (112), Expect = 4e-05
Identities = 45/191 (23%), Positives = 73/191 (38%), Gaps = 15/191 (7%)
Query: 32 TAGTRIIHLRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPE 91
T G++ + R+ E +S + AE + + + ++E PE Q+ D +
Sbjct: 123 TVGSQEMTGRKEETKSEPKEAEEKESTLASEKQKAEEKEAKPESG--------QKADAND 174
Query: 92 DASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVD 151
P +E+ + AS E G ++E E P E D+E ++ E
Sbjct: 175 RDKPEPKATVEEEDAKTASQEETG-QRKECSTE---PKEKATDEEAKAESQKAVVEDEAK 230
Query: 152 QQEDGPEDASPTEHGIDQEEDGPEDASPTEH-EHGVDQEEDGPEDASPTEHGVDQEEDGP 210
+ P+ +HG +E D E+A E E G EE + E G P
Sbjct: 231 AEPKEPDGKEEAKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQDVEKEPEGGAGVIPSSP 290
Query: 211 ED--ASPTEHG 219
E+ SPT G
Sbjct: 291 EEWPESPTGEG 301
Score = 46.2 bits (108), Expect = 1e-04
Identities = 70/309 (22%), Positives = 110/309 (35%), Gaps = 35/309 (11%)
Query: 40 LRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHG 99
L E + S + D +A + D G++E+ + ++ + P++A E
Sbjct: 91 LDEVKVESQREAGGKEDAEAELKKED-GEKEETTVGSQEMTGRKEETKSEPKEAEEKEST 149
Query: 100 VNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED 159
+ E + + Q+ D + +P +EED + AS E G ++E E
Sbjct: 150 LASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDA-KTASQEETG-QRKECSTE- 206
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEE-DGPEDASPTEHGVDQEEDGPEDASPTEH 218
P E D+E + E E + +E DG E+A +HG +E D E+A
Sbjct: 207 --PKEKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEA---KHGAKEEADAKEEA----- 256
Query: 219 GVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQ--EDGPEDASRTEHGVGHRAGRAC 276
EDA E G E+ +D G PE+ + G GH
Sbjct: 257 --------EDAEEAEPGSPSEEQEQDVEKEPEGGAGVIPSSPEEWPESPTGEGHNLS--- 305
Query: 277 AAFLSSRRDNLYLSFKKANSAHVTGIISSRSDSELLDWNSKHTGEKDALFLESKCSSLAP 336
D L + + SS SD S +GEK E + S+ A
Sbjct: 306 -------TDGLGPDCVASGQTSPSASESSPSDVPQSPPESPSSGEKKEKAPERRVSAPAR 358
Query: 337 EGNPVPQKR 345
P Q R
Sbjct: 359 PRGPRAQNR 367
Score = 39.7 bits (91), Expect = 0.012
Identities = 60/272 (22%), Positives = 86/272 (31%), Gaps = 60/272 (22%)
Query: 56 DCDASPTEHDVGQEEDGPEDASPTEHGVDQQE--DGPEDASPTE--------HGVNQEDG 105
DC A E +E ED + D E G A T+ G E G
Sbjct: 10 DCSAEAREKMEQKEGKLSEDGTTVSPAADNPEMSGGGAPAEETKGTAGKAINEGPPTESG 69
Query: 106 PEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDG----------PEDASLTEHGVDQQE- 154
++ +P E G+ + G + Q E G ED E V QE
Sbjct: 70 KQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGKEDAEAELKKEDGEKEETTVGSQEM 129
Query: 155 --------DGPEDASPTEHGIDQEEDGPE--DASPTEHEHGVDQEEDGPEDASPTEH--- 201
P++A E + E+ E +A P + + D PE + E
Sbjct: 130 TGRKEETKSEPKEAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDA 189
Query: 202 -GVDQEEDGPE---DASPTEHGVDQE---------------------DGPEDAR-PTEHG 235
QEE G P E D+E DG E+A+ +
Sbjct: 190 KTASQEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEAKHGAKEE 249
Query: 236 VDQEDGPEDARPTEHGVDQEDGPEDASRTEHG 267
D ++ EDA E G E+ +D + G
Sbjct: 250 ADAKEEAEDAEEAEPGSPSEEQEQDVEKEPEG 281
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 49.3 bits (116), Expect = 2e-05
Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 43/248 (17%)
Query: 67 GQEEDGPEDASPTEHGVDQ--QEDGPEDA---SPTEHGVNQEDGPEDASPTEHGVDQQED 121
G E PED SP G + Q+D P + + T V + G + +P + +
Sbjct: 141 GAEAQTPED-SPNRSGAEAKTQKDSPSKSGSEAQTTKDVPNKSGADGQTPKD---GSSKS 196
Query: 122 GPEDARPTE--HGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDG------ 173
G ED P + + E+ P+D S + G ++Q GP D P++ G +++
Sbjct: 197 GAEDQTPKDVPNKSGAEKQTPKDGS-NKSGAEEQ--GPIDG-PSKSGAEEQTSKDSPNKV 252
Query: 174 -PEDASPTEHEHGVDQEEDGPE----------DASPTEHGVDQEEDGPED--ASPTEHGV 220
PE S +H + D E D + E G E SP + V
Sbjct: 253 VPEQPSRKDHSKPISNPSDNKELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEV 312
Query: 221 DQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRACAAFL 280
+ ED P E D + GPE+ P + ++ G + E + G
Sbjct: 313 KSSEPTEDVEPKE-AEDDDTGPEEGSPPKEEKEKMSGSASSENREGTLSDSTG------- 364
Query: 281 SSRRDNLY 288
S +D+LY
Sbjct: 365 -SEKDDLY 371
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 48.9 bits (115), Expect = 2e-05
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 28/241 (11%)
Query: 38 IHLRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPT---EHGVDQQEDGPEDAS 94
+ ++E ++ +++ + E + + E +V ++ + +P E G ++E+G E+
Sbjct: 482 VSMKEEKKEAAEEKEEEPEAE----EEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEE 537
Query: 95 PTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQE 154
+ G + E S E G ++E+G ++ TE E +G E + E V+++
Sbjct: 538 EEDEGAKSDQAEEGGSEKE-GSSEKEEGEQEEGETE----AEAEGEEAEAKEEKKVEEKS 592
Query: 155 DGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDAS 214
+ E A+ E D + + PE A + V+++ P SP V+++ P S
Sbjct: 593 E--EVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSP----VEEKGKSPVPKS 646
Query: 215 PTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEH----GVDQEDGPEDASRTEHGVGH 270
P E ++ P P E ++ P P E V + E S+ E G G
Sbjct: 647 PVE---EKGKSPVPKSPVE---EKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGE 700
Query: 271 R 271
+
Sbjct: 701 Q 701
Score = 37.0 bits (84), Expect = 0.077
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 36/255 (14%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDA-SPTEHGV 100
E E+ + AE +A E + EE E A+ E D + + PE A SP
Sbjct: 563 EGEQEEGETEAEAEGEEAEAKE-EKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSP 621
Query: 101 NQEDG--PEDASPTEHG---------VDQQEDGPEDARPTEHG---------IDQEEDGP 140
+E G P SP E V+++ P P E ++++ P
Sbjct: 622 VEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSP 681
Query: 141 -------EDASLTEHGVDQQEDGPEDA---SPTEHGIDQEEDGPEDASPTEHEHGVDQEE 190
E S E G +Q++ E +P E ++++E+ P+D + +EE
Sbjct: 682 VPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEE 741
Query: 191 DGPEDASPTEH-GVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTE 249
E + T+ V E++ E+ P + ++E + E G D+ G + +R +
Sbjct: 742 AVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDK--GAKGSRKED 799
Query: 250 HGVDQE-DGPEDASR 263
V+ E +G E+ +
Sbjct: 800 IAVNGEVEGKEEVEQ 814
Score = 34.7 bits (78), Expect = 0.38
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 44 ERRSSQRRAELGDCDASPTEH-DVGQEEDGPEDASPTEHGVDQQED------GPEDASPT 96
E + ++E+ + + TE V +E+ E A E + +E+ P A+
Sbjct: 459 ETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAP 518
Query: 97 EHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDG 156
E V +E+G ++ E G Q+E+ ED DQ E+G + + G ++E+G
Sbjct: 519 E--VKEEEGEKEE---EEG--QEEEEEEDEGAKS---DQAEEGGSE----KEGSSEKEEG 564
Query: 157 PEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDA-SP 215
++ TE E +G E + E + EE E A+ E D + + PE A SP
Sbjct: 565 EQEEGETE----AEAEGEEAEAKEEKK----VEEKSEEVATKEELVADAKVEKPEKAKSP 616
Query: 216 TEHGVDQEDG--PEDARPTE 233
+E G P P E
Sbjct: 617 VPKSPVEEKGKSPVPKSPVE 636
Score = 30.0 bits (66), Expect = 9.5
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 168 DQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEED------GPEDASPTEHGVD 221
D++ + E + E V +E+ E A E + EE+ P A+ E V
Sbjct: 464 DEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPE--VK 521
Query: 222 QEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRA 275
+E+G ++ + ++ED + E G +++G + E G A
Sbjct: 522 EEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEA 575
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 48.9 bits (115), Expect = 2e-05
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 28/241 (11%)
Query: 38 IHLRETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPT---EHGVDQQEDGPEDAS 94
+ ++E ++ +++ + E + + E +V ++ + +P E G ++E+G E+
Sbjct: 106 VSMKEEKKEAAEEKEEEPEAE----EEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEE 161
Query: 95 PTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQE 154
+ G + E S E G ++E+G ++ TE E +G E + E V+++
Sbjct: 162 EEDEGAKSDQAEEGGSEKE-GSSEKEEGEQEEGETE----AEAEGEEAEAKEEKKVEEKS 216
Query: 155 DGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDAS 214
+ E A+ E D + + PE A + V+++ P SP V+++ P S
Sbjct: 217 E--EVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSP----VEEKGKSPVPKS 270
Query: 215 PTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEH----GVDQEDGPEDASRTEHGVGH 270
P E ++ P P E ++ P P E V + E S+ E G G
Sbjct: 271 PVE---EKGKSPVPKSPVE---EKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGE 324
Query: 271 R 271
+
Sbjct: 325 Q 325
Score = 37.0 bits (84), Expect = 0.077
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 36/255 (14%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDA-SPTEHGV 100
E E+ + AE +A E + EE E A+ E D + + PE A SP
Sbjct: 187 EGEQEEGETEAEAEGEEAEAKE-EKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSP 245
Query: 101 NQEDG--PEDASPTEHG---------VDQQEDGPEDARPTEHG---------IDQEEDGP 140
+E G P SP E V+++ P P E ++++ P
Sbjct: 246 VEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSP 305
Query: 141 -------EDASLTEHGVDQQEDGPEDA---SPTEHGIDQEEDGPEDASPTEHEHGVDQEE 190
E S E G +Q++ E +P E ++++E+ P+D + +EE
Sbjct: 306 VPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEE 365
Query: 191 DGPEDASPTEH-GVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTE 249
E + T+ V E++ E+ P + ++E + E G D+ G + +R +
Sbjct: 366 AVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDK--GAKGSRKED 423
Query: 250 HGVDQE-DGPEDASR 263
V+ E +G E+ +
Sbjct: 424 IAVNGEVEGKEEVEQ 438
Score = 34.7 bits (78), Expect = 0.38
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 44 ERRSSQRRAELGDCDASPTEH-DVGQEEDGPEDASPTEHGVDQQED------GPEDASPT 96
E + ++E+ + + TE V +E+ E A E + +E+ P A+
Sbjct: 83 ETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAP 142
Query: 97 EHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDG 156
E V +E+G ++ E G Q+E+ ED DQ E+G + + G ++E+G
Sbjct: 143 E--VKEEEGEKEE---EEG--QEEEEEEDEGAKS---DQAEEGGSE----KEGSSEKEEG 188
Query: 157 PEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDA-SP 215
++ TE E +G E + E + EE E A+ E D + + PE A SP
Sbjct: 189 EQEEGETE----AEAEGEEAEAKEEKK----VEEKSEEVATKEELVADAKVEKPEKAKSP 240
Query: 216 TEHGVDQEDG--PEDARPTE 233
+E G P P E
Sbjct: 241 VPKSPVEEKGKSPVPKSPVE 260
Score = 30.0 bits (66), Expect = 9.5
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 168 DQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEED------GPEDASPTEHGVD 221
D++ + E + E V +E+ E A E + EE+ P A+ E V
Sbjct: 88 DEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPE--VK 145
Query: 222 QEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGRA 275
+E+G ++ + ++ED + E G +++G + E G A
Sbjct: 146 EEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEA 199
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 48.9 bits (115), Expect = 2e-05
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 132 GIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEED 191
G D+E+ D+ GVD++E+ E G D+E++ ED E + D++ED
Sbjct: 147 GYDREDQEAPDSDAEVDGVDEEEED-------EEGEDEEDEDDEDGEEEEFDEEDDEDED 199
Query: 192 GPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHG 251
D E V +EE+ E G+D+ED ED E ++E G + R E
Sbjct: 200 VEGDEDDDE--VSEEEE--------EFGLDEEDEDED----EDEEEEEGGKGEKRKRETD 245
Query: 252 VDQED 256
+ ED
Sbjct: 246 DEGED 250
Score = 44.7 bits (104), Expect = 4e-04
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 115 GVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGP 174
G D+++ D+ G+D+EE ED + + EDG E+ E D++ +G
Sbjct: 147 GYDREDQEAPDSDAEVDGVDEEE---EDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGD 203
Query: 175 ED---ASPTEHEHGVDQE-EDGPEDASPTEHGVDQEEDGPED 212
ED S E E G+D+E ED ED E G ++ D
Sbjct: 204 EDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETD 245
Score = 43.1 bits (100), Expect = 0.001
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 185 GVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQE-DGPE 243
G D+E+ D+ GVD+EE+ E E D EDG E+ E D++ +G E
Sbjct: 147 GYDREDQEAPDSDAEVDGVDEEEEDEEGED--EEDEDDEDGEEEEFDEEDDEDEDVEGDE 204
Query: 244 D-----ARPTEHGVDQEDGPEDASRTEHGVG 269
D E G+D+ED ED E G
Sbjct: 205 DDDEVSEEEEEFGLDEEDEDEDEDEEEEEGG 235
Score = 41.6 bits (96), Expect = 0.003
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 82 GVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPE 141
G D+++ D+ GV++E+ ED E G D++++ ED E D+E+D E
Sbjct: 147 GYDREDQEAPDSDAEVDGVDEEE--ED----EEGEDEEDEDDEDGEEEE--FDEEDDEDE 198
Query: 142 DASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPED 195
D E D+ + E+ E D++ED E+ + + +++G +D
Sbjct: 199 DVEGDEDD-DEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
Score = 38.5 bits (88), Expect = 0.027
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 68 QEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDAR 127
+E+ D+ GVD++E+ E E + EDG E+ E D+ +G ED
Sbjct: 150 REDQEAPDSDAEVDGVDEEEEDEEGED--EEDEDDEDGEEEEFDEEDDEDEDVEGDED-- 205
Query: 128 PTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEED 172
E ++EE G ++ E +++E+G + D+ ED
Sbjct: 206 DDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGED 250
Score = 36.6 bits (83), Expect = 0.10
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 149 GVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVD-QEEDGPEDASPTEHGVDQEE 207
G D+++ D+ G+D+EE+ + ++E+ +D E D+E+
Sbjct: 147 GYDREDQEAPDSDAEVDGVDEEEEDE------------EGEDEEDEDDEDGEEEEFDEED 194
Query: 208 DGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTE 265
D ED D++D E G+D+ED ED E ++E G + + E
Sbjct: 195 DEDEDVEG-----DEDDDEVSEEEEEFGLDEEDEDED----EDEEEEEGGKGEKRKRE 243
Score = 33.5 bits (75), Expect = 0.86
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 63 EHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQ-ED 121
E + G++E+ +D E D+++D ED E +D E G+D++ ED
Sbjct: 170 EDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDE-----DDDEVSEEEEEFGLDEEDED 224
Query: 122 GPEDARPTEHGIDQEEDGPEDASLTEHGVDQQED 155
ED ++EE+G + D+ ED
Sbjct: 225 EDED--------EEEEEGGKGEKRKRETDDEGED 250
>gi|42476169 Paf1, RNA polymerase II associated factor, homolog
[Homo sapiens]
Length = 531
Score = 48.9 bits (115), Expect = 2e-05
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 19/210 (9%)
Query: 42 ETERRSSQRRAELGDCDASPT-----EHDVGQEEDGPEDASPTE---HGVDQQEDGPEDA 93
ET R S+RRA+ G + D+ ++E ++A + H +++E+ +
Sbjct: 327 ETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMET 386
Query: 94 SPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQ 153
E G + E+ + +S + G + + G E R +E D E + + G D+
Sbjct: 387 EEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESER-------EEGDRDEASDKSGSGEDES 439
Query: 154 -EDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPED 212
ED A E + D +DA + + G Q + S + G +
Sbjct: 440 SEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRSHSRS 499
Query: 213 ASPTEHGVD---QEDGPEDARPTEHGVDQE 239
ASP G + QEDG E A D +
Sbjct: 500 ASPFPSGSEHSAQEDGSEAAASDSSEADSD 529
Score = 45.4 bits (106), Expect = 2e-04
Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 22 LVRRRVPGGLTAGTRII------HLRETERRSSQ-RRAELGDCDASPTEHDVGQEEDGPE 74
L +RR G+ +GT + + E E + + R+A+L + + E + + E+
Sbjct: 332 LSKRRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMETEEKEA 391
Query: 75 DASPTEH--GVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEH- 131
S E G +++G ED +E+G D + + G + E ++AR
Sbjct: 392 GGSDEEQEKGSSSEKEGSEDEHSGSES-EREEGDRDEASDKSGSGEDESSEDEARAARDK 450
Query: 132 ----GIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVD 187
G D + + D+ + G Q + S + G + ASP
Sbjct: 451 EEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRSHSRSASPFPSGSEHS 510
Query: 188 QEEDGPEDASPTEHGVDQEED 208
+EDG E A+ D + D
Sbjct: 511 AQEDGSEAAASDSSEADSDSD 531
Score = 41.6 bits (96), Expect = 0.003
Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 12/157 (7%)
Query: 106 PEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEH 165
PE+ E +++E G D E G E++G ED EH + E + +
Sbjct: 376 PEEEEEEEMETEEKEAGGSDEEQ-EKGSSSEKEGSED----EHSGSESE---REEGDRDE 427
Query: 166 GIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDG 225
D+ G +++S E D+EE DA + +ED + +++ D
Sbjct: 428 ASDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSN 487
Query: 226 PEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDAS 262
R H P +EH QEDG E A+
Sbjct: 488 GGGQRSRSHSRSASPFPSG---SEHSA-QEDGSEAAA 520
Score = 40.0 bits (92), Expect = 0.009
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 28/184 (15%)
Query: 136 EEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPED 195
E PE+ E +++E G D E G E++G ED EH + E+G D
Sbjct: 372 ENHEPEEEEEEEMETEEKEAGGSDEEQ-EKGSSSEKEGSED----EHSGSESEREEGDRD 426
Query: 196 ASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQE 255
+ + G ++E ++A D+E+ +E D +D ED + G D
Sbjct: 427 EASDKSGSGEDESSEDEARAAR---DKEEIFGSDADSEDDADSDD--EDRGQAQGGSD-- 479
Query: 256 DGPEDASRTEHGVGHRA---GRACAAFLSSRRDNLYLSFKKANSAHVTGIISSRSDSELL 312
D+ +G G R+ R+ + F S +SA G ++ SDS
Sbjct: 480 ---NDSDSGSNGGGQRSRSHSRSASPFPSG----------SEHSAQEDGSEAAASDSSEA 526
Query: 313 DWNS 316
D +S
Sbjct: 527 DSDS 530
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 93 ASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGV-- 150
A P + N ++ ++ S E D +ED +D D++ED E A++
Sbjct: 128 AIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDE-----DEDEDEIEPAAMKAAAAAP 182
Query: 151 -DQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDG 209
+ ED +D + D+E+D E+A T G + P A D+EED
Sbjct: 183 ASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEED- 241
Query: 210 PEDASPTEHGVDQEDGPEDARPTEHGVDQE 239
ED + D++D ED E ++E
Sbjct: 242 DEDEDDDDDEDDEDDDDEDDEEEEEEEEEE 271
Score = 45.8 bits (107), Expect = 2e-04
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 60 SPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQ 119
S E D EED ED + D+ E A+ ED +D + D++
Sbjct: 145 SDEEEDDDSEED-EEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEE 203
Query: 120 EDGPEDARPTEHGIDQE---------EDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQE 170
+D E+A T ++ ++ ED E D+ +D ED + D+E
Sbjct: 204 DDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEE 263
Query: 171 EDGPEDASPTEHEHGVDQEEDGPEDASP 198
E+ E+ P + G ++E + A+P
Sbjct: 264 EEEEEEEEPVKEAPGKRKKEMAKQKAAP 291
Score = 44.7 bits (104), Expect = 4e-04
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 68 QEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDAR 127
+E+ E+ +E + ED ED E + AS E D ++D +D
Sbjct: 142 KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDD- 200
Query: 128 PTEHGIDQEEDGPEDASLTEHGVDQQ---------EDGPEDASPTEHGIDQEEDGPEDAS 178
D+E+D E+A T ++ ++ ED E D+++D ED
Sbjct: 201 ------DEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDE 254
Query: 179 PTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASP 215
+ E ++EE+ E+ G ++E + A+P
Sbjct: 255 DDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAP 291
Score = 44.3 bits (103), Expect = 5e-04
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 139 GPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVD----------- 187
G + A++ G ++ ++ S E D EED +D E E ++
Sbjct: 123 GKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAP 182
Query: 188 --QEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDG---PEDARPTEHGVDQEDGP 242
++ED +D + D+E+D E+A T ++ P A+ D+E+
Sbjct: 183 ASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDD 242
Query: 243 EDARPTEHGVDQEDGPEDASRTE 265
ED + D++D ED E
Sbjct: 243 EDEDDDDDEDDEDDDDEDDEEEE 265
Score = 35.0 bits (79), Expect = 0.29
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 11/115 (9%)
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHG 219
A+P + G G ++ + E ++E+D E+ + D++ED E A+
Sbjct: 120 ATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAA 179
Query: 220 VDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPEDASRTEHGVGHRAGR 274
ED E D +D ED D E+A T G +A +
Sbjct: 180 AAPASEDEDDEDDEDDEDDDDDEED-----------DSEEEAMETTPAKGKKAAK 223
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 48.5 bits (114), Expect = 3e-05
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 22/205 (10%)
Query: 68 QEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQEDGPEDAR 127
+EE+ E+ E +++ED E+ E +E+ E+ E ++E+G +
Sbjct: 889 EEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEF---EEEEGELEEE 945
Query: 128 PTEHGIDQEE--DGPEDASLTEHGVDQQEDGPEDAS-------PTEHGIDQEEDGPE--- 175
E ++EE + ED G + +E P + P Q E PE
Sbjct: 946 EEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGL 1005
Query: 176 ----DASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARP 231
+ TE E G D +A P++ V++E + P P + V++E A P
Sbjct: 1006 LLEVEEPGTEEERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEE---PSAPP 1062
Query: 232 TEHGVDQEDGPEDARPTEHGVDQED 256
T + EDG + +P +E+
Sbjct: 1063 TLLEEETEDGSDKVQPPPETPAEEE 1087
Score = 37.0 bits (84), Expect = 0.077
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 158 EDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTE 217
ED + EE+ E+ E E ++EED E+ E ++EE+ E+ E
Sbjct: 876 EDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEE---FE 932
Query: 218 HGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHG 251
++E+G + E ++E+ E+ E G
Sbjct: 933 EEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFG 966
Score = 36.6 bits (83), Expect = 0.10
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 134 DQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPED-ASPTEHEHGVDQEEDG 192
++EE+ E+ E +++ED E+ E ++EE+ E+ E E G +EE+
Sbjct: 888 EEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 947
Query: 193 PEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARP 231
ED ++EE+ E+ E G + E A P
Sbjct: 948 EED--------EEEEEELEEVEDLEFGTAGGEVEEGAPP 978
Score = 34.3 bits (77), Expect = 0.50
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 175 EDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEH 234
ED + ++EE+ E+ E ++EED E+ E ++E+ E+ E
Sbjct: 876 EDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEE--EEEEEFEE 933
Query: 235 GVDQEDGPEDARPTEHGVDQEDGPEDASRTEHG 267
++E+G + E ++E+ E+ E G
Sbjct: 934 EFEEEEGELEEEEEEEDEEEEEELEEVEDLEFG 966
Score = 33.9 bits (76), Expect = 0.66
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 22/168 (13%)
Query: 100 VNQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPED 159
+N D E+ +++E+ E+ E ++EE+ E+ E +++E+ E+
Sbjct: 883 INSSDEEEEEE------EEEEEEEEEEEEEEEDFEEEEEDEEEYFEEE---EEEEEEFEE 933
Query: 160 ASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEH- 218
E G +EE+ ED E V+ E G E G P P E
Sbjct: 934 EFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTA-GGEVEEGAPPPPTLPPALPPPESP 992
Query: 219 -GVDQEDGPEDA---RPTEHGVDQEDGPE-------DARPTEHGVDQE 255
V E PE E G ++E G + +A P++ V++E
Sbjct: 993 PKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAPEALPSQGEVERE 1040
Score = 33.5 bits (75), Expect = 0.86
Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Query: 147 EHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQE 206
E +++E+ E+ E ++EE+ E+ E E + EE+ E+ E ++E
Sbjct: 890 EEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEE--EEE 947
Query: 207 EDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQEDGPE 259
E+ E+ E D E G E P P E + PE
Sbjct: 948 EEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPE 1000
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 142 DASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEH 201
+ LT ++ ++ E+ E ++EE+ ED E + EE+ E+ E
Sbjct: 875 EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEE 934
Query: 202 GVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARP 247
+EE+G + E ++E+ E+ E G + E A P
Sbjct: 935 --FEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPP 978
Score = 32.7 bits (73), Expect = 1.5
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 117 DQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPED 176
D++E+ E+ E ++EE+ ED E + +E+ E+ E ++E + E
Sbjct: 887 DEEEEEEEEEEEEE---EEEEEEEED---FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEG 940
Query: 177 ASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGV 236
E E ++EE+ E+ E G E E+ +P + P ++ P V
Sbjct: 941 ELEEEEEEEDEEEEEELEEVEDLEFGTAGGE--VEEGAPPPPTLPPALPPPESPPK---V 995
Query: 237 DQEDGPEDA---RPTEHGVDQEDGPEDA 261
E PE E G ++E G + A
Sbjct: 996 QPEPEPEPGLLLEVEEPGTEEERGADTA 1023
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 47.8 bits (112), Expect = 4e-05
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 32/231 (13%)
Query: 42 ETERRSSQRRAELGDCDAS------------PTEHDVGQEEDGPEDASPTEHGVDQQEDG 89
++ ++ S+++ DC+ + +E +VG ++ ED S E D E
Sbjct: 497 DSPKKESKKKTLKNDCEENGLAKESEDDLNKESEEEVGPTKESEEDDSEKESDEDCSEKQ 556
Query: 90 PEDASPTEHGVN--QEDGPEDASPTE--HGVDQQEDGPEDARPTEHGIDQEEDGPEDASL 145
ED S E N ++D E+ S E V +E D+ +E E+DG E L
Sbjct: 557 SEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEF----EDDGSEKV-L 611
Query: 146 TEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQ 205
E G +++ D D ++EED E E + ++E++ D E +
Sbjct: 612 DEEGSEREFDEDSDEK------EEEEDTYEKVFDDESD---EKEDEEYADEKGLEAADKK 662
Query: 206 EEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDARPTEHGVDQED 256
E+G D E D+ED D + E E ED E D+E+
Sbjct: 663 AEEGDADEKLFEESDDKEDEDADGKEVEDA--DEKLFEDDDSNEKLFDEEE 711
Score = 44.7 bits (104), Expect = 4e-04
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
Query: 42 ETERRSSQRRAELGDCDASPTEHDV-GQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGV 100
++E+ S + +E D S E + G E+D E+ S E + + E+ + +E+
Sbjct: 543 DSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEE-NDSENSE 601
Query: 101 NQEDGPE---DASPTEHGVDQQEDGPEDARPT-EHGIDQEEDGPEDASLT-EHGVDQQED 155
++DG E D +E D+ D E+ T E D E D ED E G++ +
Sbjct: 602 FEDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEKGLEAADK 661
Query: 156 GPEDASPTEHGIDQEEDGP-EDASPTEHEHGVDQEEDGPEDASPTEHGVDQEEDGPE 211
E+ E ++ +D EDA E E D +E ED E D+EED E
Sbjct: 662 KAEEGDADEKLFEESDDKEDEDADGKEVE---DADEKLFEDDDSNEKLFDEEEDSSE 715
Score = 37.4 bits (85), Expect = 0.059
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 13/157 (8%)
Query: 41 RETERRSSQRRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGV 100
+E E S+ +E D + + G E + ED+ E ++ED E E
Sbjct: 590 KELEENDSEN-SEFEDDGSEKVLDEEGSEREFDEDSDEKE----EEEDTYEKVFDDESDE 644
Query: 101 NQEDGPEDASPTEHGVDQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDA 160
+++ D E + E+G D + E D+E++ + + D E ED
Sbjct: 645 KEDEEYADEKGLEAADKKAEEGDADEKLFEESDDKEDEDADGKEVE----DADEKLFEDD 700
Query: 161 SPTEHGIDQEEDGPEDASPTEHEHGV----DQEEDGP 193
E D+EED E E G E+GP
Sbjct: 701 DSNEKLFDEEEDSSEKLFDDSDERGTLGGFGSVEEGP 737
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,999,365
Number of Sequences: 37866
Number of extensions: 2522207
Number of successful extensions: 14964
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 453
Number of HSP's that attempted gapping in prelim test: 8559
Number of HSP's gapped (non-prelim): 3062
length of query: 851
length of database: 18,247,518
effective HSP length: 111
effective length of query: 740
effective length of database: 14,044,392
effective search space: 10392850080
effective search space used: 10392850080
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.