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Search of human proteins with 169209864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2
[Homo sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo... 220 2e-58
gi|153791741 hypothetical protein LOC729355 [Homo sapiens] 174 1e-44
gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo... 174 1e-44
gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo... 174 1e-44
gi|7706743 TP53 target 3 [Homo sapiens] 174 1e-44
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 35 0.017
gi|145309328 papilin [Homo sapiens] 32 0.11
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 31 0.18
gi|237512940 early growth response 4 [Homo sapiens] 31 0.18
gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens] 30 0.31
gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens] 30 0.31
gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens] 30 0.31
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 30 0.31
gi|239756560 PREDICTED: hypothetical protein [Homo sapiens] 30 0.41
gi|239745525 PREDICTED: hypothetical protein [Homo sapiens] 30 0.41
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens] 30 0.41
gi|169178932 PREDICTED: hypothetical protein [Homo sapiens] 30 0.53
gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens] 30 0.53
gi|169176343 PREDICTED: hypothetical protein [Homo sapiens] 30 0.53
gi|157738639 tensin 4 [Homo sapiens] 30 0.53
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 30 0.53
gi|221139926 NHS-like 1 [Homo sapiens] 29 0.70
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 29 0.70
gi|123701326 zinc finger protein 831 [Homo sapiens] 29 0.70
gi|239753749 PREDICTED: hypothetical protein [Homo sapiens] 29 0.91
gi|239752465 PREDICTED: similar to TSPY-like 2 [Homo sapiens] 29 0.91
gi|239748481 PREDICTED: hypothetical protein [Homo sapiens] 29 0.91
gi|239748226 PREDICTED: hypothetical protein [Homo sapiens] 29 0.91
gi|239747012 PREDICTED: similar to hCG1807781 [Homo sapiens] 29 0.91
gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo ... 29 0.91
>gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo
sapiens]
Length = 102
Score = 220 bits (561), Expect = 2e-58
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGCHKSSAPQERRLDPRARCVVHI 102
CFQISPAEETLELGRLVSPGCHKSSAPQERRLDPRARCVVHI
Sbjct: 61 CFQISPAEETLELGRLVSPGCHKSSAPQERRLDPRARCVVHI 102
>gi|153791741 hypothetical protein LOC729355 [Homo sapiens]
Length = 124
Score = 174 bits (441), Expect = 1e-44
Identities = 81/88 (92%), Positives = 84/88 (95%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGCHKSSAPQ 88
CFQISPAEETLELGRLVSPG + +P+
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPR 88
>gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo
sapiens]
Length = 167
Score = 174 bits (441), Expect = 1e-44
Identities = 81/88 (92%), Positives = 84/88 (95%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGCHKSSAPQ 88
CFQISPAEETLELGRLVSPG + +P+
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPR 88
>gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo
sapiens]
Length = 132
Score = 174 bits (441), Expect = 1e-44
Identities = 81/88 (92%), Positives = 84/88 (95%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGCHKSSAPQ 88
CFQISPAEETLELGRLVSPG + +P+
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPR 88
>gi|7706743 TP53 target 3 [Homo sapiens]
Length = 124
Score = 174 bits (441), Expect = 1e-44
Identities = 81/88 (92%), Positives = 84/88 (95%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGCHKSSAPQ 88
CFQISPAEETLELGRLVSPG + +P+
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPR 88
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 34.7 bits (78), Expect = 0.017
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 5 PCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ- 63
P + P + P P+ L + P + P +E CP+ SP + P +EP C Q
Sbjct: 793 PVATHPGSPGQPPPALLPQQVSAPPSSSCPPGLEHSL--CPSSPSPPLPPATQEPTCLQP 850
Query: 64 ISPA 67
SPA
Sbjct: 851 CSPA 854
>gi|145309328 papilin [Homo sapiens]
Length = 1251
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 31 TRTPGTVEDGSAPCPAFRSPA--VSPCGEEPCCFQISPAEETLELGRLVSPGCHKSSAPQ 88
+R PG D +P P F S + +S G EP Q + LG+LV C +AP+
Sbjct: 859 SRAPGLGGDAGSPAPPFHSSSYRISLAGVEPSLVQAA-------LGQLVRLSCSDDTAPE 911
Query: 89 ER 90
+
Sbjct: 912 SQ 913
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 31.2 bits (69), Expect = 0.18
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 28 GPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEP 59
GP G+ PCP R P +SPC P
Sbjct: 913 GPPGHPAGSAWTPDPPCPQLRPPCLSPCASRP 944
>gi|237512940 early growth response 4 [Homo sapiens]
Length = 589
Score = 31.2 bits (69), Expect = 0.18
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 23/101 (22%)
Query: 7 ISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISP 66
+ +P ++ R +A R G R P + G P P R+P CGE
Sbjct: 25 LGEPGSALERRGAAARGRCGRARAPRLPDSFPRGECPKPGARAPRSVRCGEP-------- 76
Query: 67 AEETLELGRLVSPGCHKSSAPQERRLDPRA-----RCVVHI 102
+ P + PQ +R PRA R ++H+
Sbjct: 77 ----------LPPASPPPARPQAQRARPRAPHSRRRAMLHL 107
>gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]
Length = 554
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 474 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 527
>gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]
Length = 501
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 421 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 474
>gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]
Length = 509
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 429 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 482
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 30.4 bits (67), Expect = 0.31
Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ 63
SP P AS P PT+ D+ ED P SP + P EEP Q
Sbjct: 678 SPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLL-PLPEEP---Q 733
Query: 64 ISPAEETLELGRLVSPGCHKSSAPQERRLDPR 95
+ P E G H S P+E L PR
Sbjct: 734 LCPRSE----------GPHLSPRPEEPHLSPR 755
Score = 28.9 bits (63), Expect = 0.91
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 18/105 (17%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFR---------SPAVSP 54
SP +P S P S L P P + P + CPA P++SP
Sbjct: 834 SPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSP 893
Query: 55 CGEEPCCFQ-----ISPAEETLELGRLVSPGCHKSSAPQERRLDP 94
EP + +SP E L L SP S +PQ DP
Sbjct: 894 LLGEPALSEPGEPPLSPLPEELPL----SPSGEPSLSPQLMPPDP 934
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 16 PRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCC 61
P AL P+ S PD PG+ D A P +P P E CC
Sbjct: 2353 PPAQALAPSPPSHPDIFRPGSYTDPYAQPPL--TPRPQPPPPESCC 2396
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 45 PAFRSPAVSPCGEEPCCFQISPAEETLELGRLVSPGCHKSSAPQERRLDP 94
P P +SP EEPC +SP E L C S P+E L P
Sbjct: 808 PQTEEPHLSPVPEEPC---LSPQPEESHLSPQSEEPC-LSPRPEESHLSP 853
Score = 26.6 bits (57), Expect = 4.5
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 45 PAFRSPAVSPCGEEPCCFQISPAEETLELGRLVSPGCHKSSAPQERRLDPR 95
P P +SP EEPC + P E L + G H S P+E L P+
Sbjct: 763 PQAEEPHLSPQPEEPCLCAV-PEEPHLS---PQAEGPHLSPQPEELHLSPQ 809
>gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 10 PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
P + P +LRP A SG PG V GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169
>gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 10 PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
P + P +LRP A SG PG V GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169
>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
Length = 1024
Score = 30.0 bits (66), Expect = 0.41
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFR---SPAVSP 54
S PA+ + S LR AG GP R G V +APC R SP V+P
Sbjct: 34 SPPASMYGSTGSLLRRVAGPGPRGRELGRV---TAPCTPLRGPPSPRVAP 80
>gi|169178932 PREDICTED: hypothetical protein [Homo sapiens]
Length = 62
Score = 29.6 bits (65), Expect = 0.53
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
MR SP S P PR G GP+ R PG G P PA S + C E
Sbjct: 1 MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48
>gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
Length = 127
Score = 29.6 bits (65), Expect = 0.53
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 16 PRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
PRPS L + GS PD + P +AP P
Sbjct: 92 PRPSDLNSSTGSSPDLQLPDPQTPTAAPAP 121
>gi|169176343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 62
Score = 29.6 bits (65), Expect = 0.53
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
MR SP S P PR G GP+ R PG G P PA S + C E
Sbjct: 1 MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48
>gi|157738639 tensin 4 [Homo sapiens]
Length = 715
Score = 29.6 bits (65), Expect = 0.53
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 7/34 (20%)
Query: 23 PTAGSGPDTRTPG---TVEDGSA----PCPAFRS 49
P GS P RTPG +V+ G+A PCPA RS
Sbjct: 381 PEPGSSPPQRTPGHQNSVQPGAASPSNPCPATRS 414
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 29.6 bits (65), Expect = 0.53
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 17 RPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGRL 76
RP A+RP+A GP PGT ++P A SP E ++++
Sbjct: 121 RPQAVRPSAPRGP----PGTTPVAASPSRASSSPGRGGSSEPGSPRSAYSSDDS------ 170
Query: 77 VSPGCHKSSAPQERRL 92
GC + +P ER L
Sbjct: 171 ---GCEGALSPAEREL 183
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 21 LRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISP 66
L P GS P P V PCPA RSP + P C Q SP
Sbjct: 920 LDPAVGS-PPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSP 964
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 29.3 bits (64), Expect = 0.70
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAF-RSPAVSPCGEEPCCFQISP 66
SQP ++ A T G ++ T + GS F R+P S GEEP F P
Sbjct: 2360 SQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGEEPTTFHSRP 2419
Query: 67 A 67
A
Sbjct: 2420 A 2420
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAF-RSPAVSPCGEEPCCFQISP 66
SQP ++ A T G ++ T + GS F RS S GEEP F P
Sbjct: 2834 SQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRP 2893
Query: 67 A 67
A
Sbjct: 2894 A 2894
>gi|123701326 zinc finger protein 831 [Homo sapiens]
Length = 1677
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 42 APCPAFRSPAVSPCGEEPCCFQISPAEETLELGRLVSP 79
+PC RSP VSP G +Q+ PA L+ G + +P
Sbjct: 739 SPCSGSRSPLVSPNGRLELGWQMPPAPGPLKGGDVEAP 776
>gi|239753749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 28.9 bits (63), Expect = 0.91
Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 27/110 (24%)
Query: 10 PAASWHPRPSALRPTA---GSGPDTRTPGTVED-GSAPCPAFRSPAVSPC-------GEE 58
P W P+P+A R + SGP E GS P R P P
Sbjct: 28 PLLRWPPQPTAARASEIWHRSGPQHVALIRRESCGSQGAPRGRRPPPRPAVPADHGSARP 87
Query: 59 PCCFQISPAEETLELGRLVSPGCHKSSAPQER----------RLDPRARC 98
P C SP R SPG H+S++ ER R+ P+ RC
Sbjct: 88 PGCCLASPRI------RQGSPGAHQSASASERGGSWDWQGHPRVAPQGRC 131
>gi|239752465 PREDICTED: similar to TSPY-like 2 [Homo sapiens]
Length = 208
Score = 28.9 bits (63), Expect = 0.91
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVE-----DGSAPCPAFRSPAVSPC 55
M A P ++QPA +W R AL A TPG + G+A A R +
Sbjct: 1 MPAFPKVTQPACAWMQRYLALALRASQ--SRLTPGGWDCRPALVGAAQGDAHRLALIGRR 58
Query: 56 GEEPCCFQISPAEETLELGRLVSPGCHKSSAPQERR 91
G ++ E LG PGC + P+ +R
Sbjct: 59 GRLAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQR 94
>gi|239748481 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 28.9 bits (63), Expect = 0.91
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Query: 18 PSALRPTAGSGPDTRTPGTVEDGSAPCPAF--RSPAVSP----CGEEPCCFQISPAEETL 71
P A +A S PDT G AP P F S V+P CG+ ++ PA++T
Sbjct: 46 PRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQ---RLQPAQDTA 102
Query: 72 ELGRLVSPGCHKSSAP 87
G H+ S+P
Sbjct: 103 SFGH-----SHRFSSP 113
>gi|239748226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 28.9 bits (63), Expect = 0.91
Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 27/110 (24%)
Query: 10 PAASWHPRPSALRPTA---GSGPDTRTPGTVED-GSAPCPAFRSPAVSPC-------GEE 58
P W P+P+A R + SGP E GS P R P P
Sbjct: 28 PLLRWPPQPTAARASEIWHRSGPQHVALIRRESCGSQGAPRGRRPPPRPAVPADHGSARP 87
Query: 59 PCCFQISPAEETLELGRLVSPGCHKSSAPQER----------RLDPRARC 98
P C SP R SPG H+S++ ER R+ P+ RC
Sbjct: 88 PGCCLASPRI------RQGSPGAHQSASASERGGSWDWQGHPRVAPQGRC 131
>gi|239747012 PREDICTED: similar to hCG1807781 [Homo sapiens]
Length = 208
Score = 28.9 bits (63), Expect = 0.91
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVE-----DGSAPCPAFRSPAVSPC 55
M A P ++QPA +W R AL A TPG + G+A A R +
Sbjct: 1 MPAFPKVTQPACAWMQRYLALALRASQ--SRLTPGGWDCRPALVGAAQGDAHRLALIGRR 58
Query: 56 GEEPCCFQISPAEETLELGRLVSPGCHKSSAPQERR 91
G ++ E LG PGC + P+ +R
Sbjct: 59 GRLAVLARLQVPFECSPLGGAWKPGCTVFTLPEAQR 94
>gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo
sapiens]
Length = 199
Score = 28.9 bits (63), Expect = 0.91
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Query: 18 PSALRPTAGSGPDTRTPGTVEDGSAPCPAF--RSPAVSP----CGEEPCCFQISPAEETL 71
P A +A S PDT G AP P F S V+P CG+ ++ PA++T
Sbjct: 46 PRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQ---RLQPAQDTA 102
Query: 72 ELGRLVSPGCHKSSAP 87
G H+ S+P
Sbjct: 103 SFGH-----SHRFSSP 113
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,782,086
Number of Sequences: 37866
Number of extensions: 346479
Number of successful extensions: 1760
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 1623
Number of HSP's gapped (non-prelim): 262
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.