LOC100130054 8104

Name: LOC100130054	Sequence: fasta or formatted (62aa)		NCBI GI: 169178932
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {62aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 5 1 C cysteine 3.2 2 1 D aspartate 3.2 2 1 E glutamate 11.3 7 2 F phenylalanine 1.6 1 1 G glycine 16.1 10 2 H histidine 0.0 0 0 I isoleucine 0.0 0 0 K lysine 0.0 0 0 L leucine 6.5 4 2 M methionine 1.6 1 1 N asparagine 0.0 0 0 P proline 19.4 12 2 Q glutamine 1.6 1 1 R arginine 8.1 5 2 S serine 16.1 10 2 T threonine 0.0 0 0 V valine 0.0 0 0 W tryptophan 1.6 1 1 Y tyrosine 1.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100130054 1.000 PREDICTED: hypothetical protein SNRPN 0.107 small nuclear ribonucleoprotein polypeptide N SNRPN 0.107 small nuclear ribonucleoprotein polypeptide N SNRPN 0.107 small nuclear ribonucleoprotein polypeptide N SNRPN 0.107 small nuclear ribonucleoprotein polypeptide N SNRPN 0.107 small nuclear ribonucleoprotein polypeptide N SNRPB 0.098 small nuclear ribonucleoprotein polypeptide B/B' iso... MAPK7 0.080 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.080 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.080 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.080 mitogen-activated protein kinase 7 isoform 2 COL14A1 0.080 collagen, type XIV, alpha 1 SNRPB 0.071 small nuclear ribonucleoprotein polypeptide B/B' isof... IRF7 0.071 interferon regulatory factor 7 isoform d IRF7 0.071 interferon regulatory factor 7 isoform a IRF7 0.071 interferon regulatory factor 7 isoform b ZFPM1 0.071 zinc finger protein, multitype 1 STIM1 0.071 stromal interaction molecule 1 precursor NCOR2 0.062 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.062 nuclear receptor co-repressor 2 isoform 1 ZCCHC2 0.062 zinc finger, CCHC domain containing 2 PRB1 0.062 proline-rich protein BstNI subfamily 1 isoform 3 pre... MATN3 0.062 matrilin 3 precursor COL1A1 0.062 alpha 1 type I collagen preproprotein NRG1 0.054 neuregulin 1 isoform GGF2 CASKIN2 0.054 cask-interacting protein 2 isoform b CASKIN2 0.054 cask-interacting protein 2 isoform a COL4A5 0.054 type IV collagen alpha 5 isoform 2 precursor KDM1 0.054 amine oxidase (flavin containing) domain 2 isoform a... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.