PROP1 9398

Name: PROP1	Sequence: fasta or formatted (226aa)		NCBI GI: 169881277
Description: PROP paired-like homeobox 1		Referenced in: Homeobox and Related Proteins Pituitary
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 21 2 C cysteine 1.8 4 1 D aspartate 1.8 4 1 E glutamate 5.3 12 1 F phenylalanine 3.5 8 1 G glycine 6.6 15 3 H histidine 4.0 9 1 I isoleucine 0.9 2 1 K lysine 2.7 6 2 L leucine 8.4 19 2 M methionine 0.9 2 1 N asparagine 1.8 4 1 P proline 15.0 34 5 Q glutamine 5.8 13 1 R arginine 10.2 23 3 S serine 10.6 24 2 T threonine 5.3 12 3 V valine 2.2 5 1 W tryptophan 1.8 4 1 Y tyrosine 2.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PROP paired-like homeobox 1 RAX 0.163 retina and anterior neural fold homeobox PRRX2 0.152 paired related homeobox 2 ESX1 0.149 extraembryonic, spermatogenesis, homeobox 1-like [Ho... OTP 0.147 PREDICTED: orthopedia homeobox OTP 0.147 orthopedia homeobox ARX 0.147 aristaless related homeobox ALX1 0.145 cartilage paired-class homeoprotein 1 PHOX2A 0.143 paired-like homeobox 2a RAX2 0.141 retina and anterior neural fold homeobox 2 ALX4 0.134 aristaless-like homeobox 4 PAX3 0.134 paired box 3 isoform PAX3i PAX3 0.134 paired box 3 isoform PAX3g PAX3 0.134 paired box 3 isoform PAX3h PAX3 0.134 paired box 3 isoform PAX3e PAX3 0.134 paired box 3 isoform PAX3d PAX3 0.134 paired box 3 isoform PAX3 ALX3 0.134 aristaless-like homeobox 3 PRRX1 0.130 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.130 paired mesoderm homeobox 1 isoform pmx-1b SHOX2 0.127 short stature homeobox 2 isoform a PAX7 0.127 paired box 7 isoform 1 PAX7 0.127 paired box 7 isoform 2 PAX7 0.127 paired box 7 isoform 3 PAX6 0.127 paired box gene 6 isoform a PAX6 0.127 paired box gene 6 isoform b PAX6 0.127 paired box gene 6 isoform a CRX 0.127 cone-rod homeobox protein VSX2 0.125 visual system homeobox 2 PITX3 0.125 paired-like homeodomain 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.