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Search of human proteins with 169202970
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169202970 PREDICTED: hypothetical protein [Homo sapiens]
(190 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169202970 PREDICTED: hypothetical protein [Homo sapiens] 403 e-113
gi|169203510 PREDICTED: hypothetical protein [Homo sapiens] 403 e-113
gi|169202296 PREDICTED: hypothetical protein [Homo sapiens] 398 e-111
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 50 9e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 8e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 46 2e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 44 8e-05
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 44 8e-05
gi|221139926 NHS-like 1 [Homo sapiens] 44 1e-04
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 44 1e-04
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 44 1e-04
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 44 1e-04
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 44 1e-04
gi|239748337 PREDICTED: hypothetical protein XP_002346632 [Homo ... 43 1e-04
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 42 2e-04
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 42 2e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 42 3e-04
gi|40353727 synaptopodin isoform A [Homo sapiens] 42 3e-04
gi|61743942 abl-interactor 1 isoform a [Homo sapiens] 42 4e-04
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 41 5e-04
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 41 5e-04
gi|239753089 PREDICTED: hypothetical protein [Homo sapiens] 41 5e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 41 5e-04
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 41 7e-04
gi|47132519 Ras association and pleckstrin homology domains 1 is... 41 7e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 41 7e-04
gi|118402590 myosin XV [Homo sapiens] 40 0.001
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 40 0.001
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 40 0.001
>gi|169202970 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 403 bits (1035), Expect = e-113
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP 60
MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP
Sbjct: 1 MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP 60
Query: 61 PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWS 120
PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWS
Sbjct: 61 PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWS 120
Query: 121 AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE 180
AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE
Sbjct: 121 AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE 180
Query: 181 GRAGRRPRVT 190
GRAGRRPRVT
Sbjct: 181 GRAGRRPRVT 190
>gi|169203510 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 403 bits (1035), Expect = e-113
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP 60
MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP
Sbjct: 1 MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP 60
Query: 61 PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWS 120
PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWS
Sbjct: 61 PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWS 120
Query: 121 AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE 180
AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE
Sbjct: 121 AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE 180
Query: 181 GRAGRRPRVT 190
GRAGRRPRVT
Sbjct: 181 GRAGRRPRVT 190
>gi|169202296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 398 bits (1022), Expect = e-111
Identities = 189/190 (99%), Positives = 189/190 (99%)
Query: 1 MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP 60
MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP
Sbjct: 1 MISWVVALHTVLDTAEPVTLCWAAVIRSVRLWPDISAAPPPPHPLSSRRGLGPPRAGGSP 60
Query: 61 PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWS 120
PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLP S
Sbjct: 61 PPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPGS 120
Query: 121 AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE 180
AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE
Sbjct: 121 AGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSE 180
Query: 181 GRAGRRPRVT 190
GRAGRRPRVT
Sbjct: 181 GRAGRRPRVT 190
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 50.4 bits (119), Expect = 9e-07
Identities = 50/159 (31%), Positives = 56/159 (35%), Gaps = 46/159 (28%)
Query: 35 ISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPT-PTGSFPACRPGARFGAARCHQSRENR 93
+ APPPP P RG PP GG PPP P T +G P PGA
Sbjct: 347 LGIAPPPPTP----RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGA-------------- 388
Query: 94 LVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQ--------LQENGGARLLLGAF 145
G P+PPP PP P S+G G L GG LL
Sbjct: 389 ----------GGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRGALLDQI 438
Query: 146 RAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSEGRAG 184
R + +TP S A P PP SEG G
Sbjct: 439 RQGI-QLNKTPGAPESSALQP--------PPQSSEGLVG 468
Score = 40.4 bits (93), Expect = 0.001
Identities = 37/124 (29%), Positives = 47/124 (37%), Gaps = 22/124 (17%)
Query: 33 PDISAAPPPPHPLSSRRG---LGPPRAGG-----SPPPTAPPTPTGSFPA---------- 74
P PPPP P + R G PP AGG PPP PP +G+ PA
Sbjct: 362 PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVP 421
Query: 75 ---CRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQ 131
PG GA Q R+ ++ S PPPQ S L + KR+R
Sbjct: 422 AGGLAPGGGRGAL-LDQIRQGIQLNKTPGAPESSALQPPPQSSEGLVGALMHVMQKRSRA 480
Query: 132 LQEN 135
+ +
Sbjct: 481 IHSS 484
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.4 bits (111), Expect = 8e-06
Identities = 51/172 (29%), Positives = 63/172 (36%), Gaps = 23/172 (13%)
Query: 33 PDISAAPP---PPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRP---GARFGAARC 86
P + PP PP P S P+ +PP PP+P GS PA P GA A
Sbjct: 1005 PKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGS-PAATPLPKGAPTTPAAT 1063
Query: 87 HQSRENRLVSPAESDKMSGTPLPP------PQFSPPLPWSAGAGQGKRNRQLQENGGARL 140
S + +P+ + G P PP P+ P P GA GG L
Sbjct: 1064 LPSPKGGPATPS----LKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG--L 1117
Query: 141 LLGAFRAAPGHVTRTPPL----LPSPAPFPFPFLFDARPPSLSEGRAGRRPR 188
+ AP TPP L +P P P A PPS G A P+
Sbjct: 1118 ATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK 1169
Score = 38.1 bits (87), Expect = 0.005
Identities = 48/154 (31%), Positives = 57/154 (37%), Gaps = 26/154 (16%)
Query: 33 PDISAAPPPPHPLSSRRGLGPPRAGGSP--PPTAPPTPTGSFPACRP-GARFGAARCHQS 89
P AA PP S + GL P G+P P PP+P G P GA A S
Sbjct: 1149 PTTPAATPP----SPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS 1204
Query: 90 RENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAP 149
+ L +P+ G P P +PP P A + GA A +P
Sbjct: 1205 PKGGLATPSP----KGAPTTPAA-TPPSPKGGLATPSPK--------GAPTTPAATPPSP 1251
Query: 150 GHVTRTPPLLPSPAPFPFPFLFDARPPSLSEGRA 183
TPP P AP P A PPSL G A
Sbjct: 1252 KGGPATPP--PKGAPTPPA----ATPPSLKGGLA 1279
Score = 36.2 bits (82), Expect = 0.017
Identities = 45/164 (27%), Positives = 57/164 (34%), Gaps = 30/164 (18%)
Query: 33 PDISAAPPPPHPLSSRRGLGPPRAGGSPPPTA--PPTPTGSFPACRP-GARFGAARCHQS 89
P + PP P S + G P G+P P A PP+P G P GA A
Sbjct: 959 PKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPA----- 1013
Query: 90 RENRLVSPAESDKMSGTPLP-----PPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGA 144
+ P+ + TP P PP +PP P + A GA A
Sbjct: 1014 ----VTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPK-------GAPTTPAA 1062
Query: 145 FRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSEGRAGRRPR 188
+P TP L +P P A PPS G A P+
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPA------ATPPSPKGGPATPSPK 1100
Score = 35.4 bits (80), Expect = 0.030
Identities = 40/148 (27%), Positives = 56/148 (37%), Gaps = 19/148 (12%)
Query: 33 PDISAAPPPPHPLSSRRGLGPPRAGGSPPP--TAPPTPTGSFPACRP--GARFGAARCHQ 88
P + PP P S + GL P G+P P PP+P G PA P GA A
Sbjct: 1260 PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG-PATSPPKGAPTPPAATPP 1318
Query: 89 SRENRLVSPAESDKMSGTPLPP------PQFSPPLPWSAGAGQGKRNRQLQENGGA-RLL 141
S + +P G P PP P+ +P LP + + +G + G
Sbjct: 1319 SPKGSPGTPPP----KGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA 1374
Query: 142 LGAFRAAPGHVTRTP---PLLPSPAPFP 166
+ + P +P P +PSP P
Sbjct: 1375 TPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Score = 34.7 bits (78), Expect = 0.051
Identities = 41/144 (28%), Positives = 51/144 (35%), Gaps = 13/144 (9%)
Query: 38 APPPPHPLSSRRGLGPPRAGGSP--PPTAPPTPTGSFPACRP--GARFGAARCHQSRENR 93
A PP P + GL P G+P P PP+P G PA P GA A S +
Sbjct: 1222 AATPPSP---KGGLATPSPKGAPTTPAATPPSPKGG-PATPPPKGAPTPPAATPPSLKGG 1277
Query: 94 LVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVT 153
L +P G P P +PP P A + G+ P
Sbjct: 1278 LATPPH----KGAP-NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGA 1332
Query: 154 RTPPLLPSPAPFPFPFLFDARPPS 177
TPP + P+P P L P S
Sbjct: 1333 PTPPAVTPPSPKGTPTLPATTPSS 1356
Score = 33.1 bits (74), Expect = 0.15
Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 18/174 (10%)
Query: 33 PDISAAPPP-----PHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPA------CRPGARF 81
P + A PP P P P +A +P P PT P+ P +R
Sbjct: 1465 PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRR 1524
Query: 82 G----AARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGG 137
A + ++P E+ +P P+ +P +P A +++ +
Sbjct: 1525 DPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEA--SSP 1582
Query: 138 ARLLLGAFRAAPG-HVTRTPPLLPSPAPFPFPFLFDARPPSLSEGRAGRRPRVT 190
+ ++ AP PP + SP+P P PPS +G A P+ T
Sbjct: 1583 PAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGT 1636
Score = 27.3 bits (59), Expect = 8.1
Identities = 35/137 (25%), Positives = 48/137 (35%), Gaps = 26/137 (18%)
Query: 33 PDISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSREN 92
P + A P P + + P+ +PP PP+P G PA P ++ + +
Sbjct: 918 PKKARATPAPKGIPASPS---PKGAPTPPAATPPSPKGG-PA-TPSPKWAPTPPAATPPS 972
Query: 93 RLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHV 152
PA + G P PP +PP P A + AP
Sbjct: 973 PKGGPA-TPSPKGAPTPPAA-TPPSPKGGPATPSP------------------KGAPTPP 1012
Query: 153 TRTPPL-LPSPAPFPFP 168
TPP SPA PFP
Sbjct: 1013 AVTPPSPKGSPAATPFP 1029
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 45.8 bits (107), Expect = 2e-05
Identities = 55/187 (29%), Positives = 61/187 (32%), Gaps = 47/187 (25%)
Query: 37 AAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPAC---RPGARFGAARCHQSRENR 93
AAP PP +R G G P+ G P P P P G P RP A C
Sbjct: 85 AAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAA 144
Query: 94 LV------SPAESDKMSGT--------------PLPPPQFSPPLPWSAGAGQGKRNR--- 130
V +PA K +G P P P P P GA Q
Sbjct: 145 AVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAAL 204
Query: 131 -----------QLQENGGARLLLGAFRAAPGHVTRTPPLL----------PSPAPFPFPF 169
L NG A LL AAPG V +TPP + PSP P P
Sbjct: 205 LNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPA 264
Query: 170 LFDARPP 176
A PP
Sbjct: 265 APAAAPP 271
Score = 36.6 bits (83), Expect = 0.013
Identities = 45/155 (29%), Positives = 54/155 (34%), Gaps = 14/155 (9%)
Query: 33 PDISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSREN 92
P AA PPP P + PP PP AP P + A + G GAA
Sbjct: 263 PAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPA--AAQNGGSAGAAPAPAPAAG 320
Query: 93 RLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHV 152
PA +SG P P + P P A KR Q L + +
Sbjct: 321 ---GPA---GVSGQPGPGAAAAAPAP-GVKAESPKRVVQAAPPAAQTLAASGPASTAASM 373
Query: 153 TRTPPL---LPSPAPFPFPFLFDARPPSLSEGRAG 184
P + LPSPA P P P L +G AG
Sbjct: 374 VIGPTMQGALPSPAAVPPP--APGTPTGLPKGAAG 406
Score = 31.2 bits (69), Expect = 0.56
Identities = 24/90 (26%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 35 ISAAPPP--------PHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARC 86
+ AAPP P ++ +GP G P P A P P P P GA
Sbjct: 351 VQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQ 410
Query: 87 HQSRENRLVSPAESDKMSGTPLPPPQFSPP 116
SR + ++ T L P PP
Sbjct: 411 SLSRTPTATTSGIRATLTPTVLAPRLPQPP 440
Score = 30.4 bits (67), Expect = 0.96
Identities = 35/121 (28%), Positives = 40/121 (33%), Gaps = 19/121 (15%)
Query: 52 GPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAESDKMSGTPLPPP 111
G P A PPP P G P RPG R + PA + PPP
Sbjct: 81 GAPGAAPEPPPAGRARPGGGGPQ-RPG---------PPSPRRPLVPAGPAPPAAKLRPPP 130
Query: 112 QFS----PPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPF 167
+ S P+P +A G A A RA PG P P P P P
Sbjct: 131 EGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPG-----PGPGPGPGPGPG 185
Query: 168 P 168
P
Sbjct: 186 P 186
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 43.9 bits (102), Expect = 8e-05
Identities = 47/148 (31%), Positives = 51/148 (34%), Gaps = 39/148 (26%)
Query: 38 APPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSP 97
APPPP PP GG PPP PP P S P P GA SR P
Sbjct: 276 APPPP----------PPSRGGPPPP--PPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPP 323
Query: 98 AESDKMSGTPLPPP----QFSPP---LPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPG 150
+PPP + PP LP SA +G +LG G
Sbjct: 324 PPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPS---------VLGV-----G 369
Query: 151 HVTRTPPLLPSPAPFPFPFLFDARPPSL 178
V PP P P P P P PP L
Sbjct: 370 PVAPPPPPPPPPPPGPPP------PPGL 391
Score = 31.6 bits (70), Expect = 0.43
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 37 AAPPPPHPLSSRRGLG---PPRAGGSPPPTAPPTPTG 70
+ PPPP P S G+G PP PPP PP P G
Sbjct: 356 SGPPPPPP--SVLGVGPVAPPPPPPPPPPPGPPPPPG 390
Score = 30.0 bits (66), Expect = 1.3
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 14/73 (19%)
Query: 38 APPPPHPLSSRRGLGPPRAGGSPPPTAP-------PTPTGSFPACRPGARFGAARCHQSR 90
APPPP P PP G PPP P PT G+ A R GA +
Sbjct: 372 APPPPPP-------PPPPPGPPPPPGLPSDGDHQVPTTAGNKAALLDQIREGAQLKKVEQ 424
Query: 91 ENRLVSPAESDKM 103
+R VS + D +
Sbjct: 425 NSRPVSCSGRDAL 437
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 43.9 bits (102), Expect = 8e-05
Identities = 52/158 (32%), Positives = 59/158 (37%), Gaps = 29/158 (18%)
Query: 38 APPPP---------HPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPAC------RPGARFG 82
APPP PL+ RR L P G P T +G P +R
Sbjct: 236 APPPTVRPRLRVLTPPLALRRAL--PERGSRTPSTRSAVLSGRVAGLGTELTLTPSSR-R 292
Query: 83 AARCHQSRENRLVSPAESDKMSGTPLP-PPQFSPPLPWSAGAGQGKRNRQLQENGGARLL 141
A H R +P + S PLP PP F P LP GQ R +L A L
Sbjct: 293 AHGSHPLSSERQAAPTRAF-CSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLR---AALA 348
Query: 142 LGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLS 179
LGA R RTP P PAP P+ P SLS
Sbjct: 349 LGAPRG------RTPSPGPGPAPALQPYTLTRFPASLS 380
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 43.5 bits (101), Expect = 1e-04
Identities = 42/136 (30%), Positives = 52/136 (38%), Gaps = 21/136 (15%)
Query: 54 PRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPAE-SDKMSGTPLP-PP 111
P G P P PP P+ FP C R L P +D G+PLP P
Sbjct: 922 PAVGSPPAPPPPPVPSPPFP------------CPADRSPFLPPPPPVTDCSQGSPLPHSP 969
Query: 112 QFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPLLPSPAPFPFP--- 168
F PP P + + L A L +P + PPLLPS P P P
Sbjct: 970 VFPPPPPEALIPFCSPPDWCLSPPRPA--LSPILPDSPVSLPLPPPLLPSSEPPPAPPLD 1027
Query: 169 --FLFDARPPSLSEGR 182
F+ D RPP + G+
Sbjct: 1028 PKFMKDTRPPFTNSGQ 1043
Score = 28.1 bits (61), Expect = 4.8
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 12/85 (14%)
Query: 33 PDISAAPP--------PPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAA 84
PD +PP P P+S L PP S PP APP RP F +
Sbjct: 986 PDWCLSPPRPALSPILPDSPVSLP--LPPPLLPSSEPPPAPPLDPKFMKDTRP--PFTNS 1041
Query: 85 RCHQSRENRLVSPAESDKMSGTPLP 109
+S L P+ ++ S P+P
Sbjct: 1042 GQPESSRGSLRPPSTKEETSRPPMP 1066
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 37 AAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVS 96
A PPPP PL G+ P +PPP APP S P R A C E V
Sbjct: 367 AVPPPPAPLQIAPGVLHP----APPPIAPPLVQPSPPVAR-----AAPVC----ETVPVH 413
Query: 97 PAESDKMSGTPLPPPQFSPPLP 118
P ++ G P PPP PPLP
Sbjct: 414 PLPQGEVQGLPPPPP--PPPLP 433
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 37 AAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVS 96
A PPPP PL G+ P +PPP APP S P R A C E V
Sbjct: 367 AVPPPPAPLQIAPGVLHP----APPPIAPPLVQPSPPVAR-----AAPVC----ETVPVH 413
Query: 97 PAESDKMSGTPLPPPQFSPPLP 118
P ++ G P PPP PPLP
Sbjct: 414 PLPQGEVQGLPPPPP--PPPLP 433
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 37 AAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVS 96
A PPPP PL G+ P +PPP APP S P R A C E V
Sbjct: 367 AVPPPPAPLQIAPGVLHP----APPPIAPPLVQPSPPVAR-----AAPVC----ETVPVH 413
Query: 97 PAESDKMSGTPLPPPQFSPPLP 118
P ++ G P PPP PPLP
Sbjct: 414 PLPQGEVQGLPPPPP--PPPLP 433
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 37 AAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVS 96
A PPPP PL G+ P +PPP APP S P R A C E V
Sbjct: 367 AVPPPPAPLQIAPGVLHP----APPPIAPPLVQPSPPVAR-----AAPVC----ETVPVH 413
Query: 97 PAESDKMSGTPLPPPQFSPPLP 118
P ++ G P PPP PPLP
Sbjct: 414 PLPQGEVQGLPPPPP--PPPLP 433
>gi|239748337 PREDICTED: hypothetical protein XP_002346632 [Homo
sapiens]
Length = 189
Score = 43.1 bits (100), Expect = 1e-04
Identities = 48/165 (29%), Positives = 61/165 (36%), Gaps = 22/165 (13%)
Query: 11 VLDTAEPVTLCWAAVIRSVRLWPDISA---APPPPHPLSSRRGLGPPRAGGSPPPTAPPT 67
V++ P L W V + P A A P G+ PR P
Sbjct: 22 VMEGPAPPPLAWGRVWAAAESAPTAGAGFQAETGPRRRPFLPGVAHPRTHRQTGPARVTR 81
Query: 68 PTGSFPACRPGAR-FGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQG 126
+ R G+ +G R + +E PA SG P P+ +P +GAGQG
Sbjct: 82 SAKAGYGLRVGSGPYGRPRGNAGQEKVWEKPASEASASGRP---PELAPA---RSGAGQG 135
Query: 127 KRNRQLQENGGARLLLGAFR-------AAPGHVTRTPPLLPSPAP 164
+R NGG R LGA R A PG T LLP P P
Sbjct: 136 RR-----PNGGDRQGLGAGRDKHTTDGAGPGEGTGPKKLLPGPRP 175
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 42.4 bits (98), Expect = 2e-04
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 31 LWPDISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSR 90
LWP + PP P P SS + PP S A P+G+ G AA S
Sbjct: 384 LWPPMGPFPPVPPPPSSGEAVAPP----STSAAALSRPSGAATTTAAGTSATAASATASG 439
Query: 91 ENRLVSPAESDKMSGTPLPPPQFSPPLP 118
+P E+ G P PPP PLP
Sbjct: 440 PGSGSAP-EAGPAPGFPFPPPWMGMPLP 466
Score = 35.0 bits (79), Expect = 0.039
Identities = 40/155 (25%), Positives = 50/155 (32%), Gaps = 45/155 (29%)
Query: 38 APPPPHPLSSRRGLGPPRAGGSPP----------PTAPPTPTGSFPACRPGARFGAARCH 87
+PPPP P GPP A PP PP P G FP P F
Sbjct: 342 SPPPPEPADQ----GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPF------ 391
Query: 88 QSRENRLVSPAESDKMSGTPLPPPQFS-----PPLPWSAGAGQGKRNRQLQENGGARLLL 142
P+PPP S PP +A + G +
Sbjct: 392 ------------------PPVPPPPSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAA 433
Query: 143 GAFRAAPGHVTRTPPLLPSPA-PFPFPFLFDARPP 176
A + PG + P P+P PFP P++ PP
Sbjct: 434 SATASGPGSGS-APEAGPAPGFPFPPPWMGMPLPP 467
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 42.4 bits (98), Expect = 2e-04
Identities = 51/158 (32%), Positives = 58/158 (36%), Gaps = 29/158 (18%)
Query: 38 APPPP---------HPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPAC------RPGARFG 82
APPPP PL+ R L P G P T +G P +R
Sbjct: 232 APPPPVRPRLRVLTPPLALRCAL--PERGSRTPSTRSAVLSGRVAGLGTELTLTPSSR-R 288
Query: 83 AARCHQSRENRLVSPAESDKMSGTPLP-PPQFSPPLPWSAGAGQGKRNRQLQENGGARLL 141
A H R +P + S PLP PP F P LP GQ R +L A L
Sbjct: 289 AHGSHALSSERQAAPTRAF-CSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLR---AALA 344
Query: 142 LGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLS 179
GA R RTP P PAP P+ P SLS
Sbjct: 345 RGAPRG------RTPSPRPGPAPALQPYALTRFPASLS 376
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 42.0 bits (97), Expect = 3e-04
Identities = 28/91 (30%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPP------PTAPPTPTGSFPACRPGARFGAARCHQSREN 92
PPPP ++ L PP P P P GS PA PG G +
Sbjct: 7 PPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAAAAA 66
Query: 93 RLVSPAESDKMSGTPLPPPQFSPPLPWSAGA 123
L+ P + PPP PP P SA A
Sbjct: 67 LLLHPPPPPPPATAAPPPPPPPPPPPASAAA 97
Score = 35.4 bits (80), Expect = 0.030
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 33 PDISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGA 83
P +AAPPPP P PP A + P + PP P G A PG GA
Sbjct: 76 PPATAAPPPPPPPP------PPPASAAAPASGPPAPPGL--AAGPGPAGGA 118
Score = 30.4 bits (67), Expect = 0.96
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTP-TGSFPACRPGARFGAA 84
PPPP P P A PPP PP P + + PA P A G A
Sbjct: 71 PPPPPP--------PATAAPPPPPPPPPPPASAAAPASGPPAPPGLA 109
Score = 29.6 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFG 82
PPPP P ++ PP PPP A S P PG G
Sbjct: 72 PPPPPPATA----APPPPPPPPPPPASAAAPASGPPAPPGLAAG 111
Score = 27.7 bits (60), Expect = 6.2
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
Query: 33 PDISAAPP---PPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQS 89
P SAA P PP P G GP AGG+P P + + P +
Sbjct: 91 PPASAAAPASGPPAPPGLAAGPGP--AGGAPTPALVAGSSAAAPFPHGDSALNEQEKELQ 148
Query: 90 RENRLVSPAESDKMSGTPLP 109
R + + PA ++ TPLP
Sbjct: 149 RRLKRLYPAVDEQ--ETPLP 166
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 42.0 bits (97), Expect = 3e-04
Identities = 42/143 (29%), Positives = 52/143 (36%), Gaps = 18/143 (12%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPA 98
PPP P S R + P R P T P+ A AAR + SP
Sbjct: 725 PPPMSPSWSERSVSPLR-----PETEARPPSRQLQALLARNIINAAR------RKSASPR 773
Query: 99 ESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAP------GHV 152
+ + P PP+ PP P R+ Q G A + AF P G
Sbjct: 774 SAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPS 833
Query: 153 TRTPPLLPSPAPFPFPFLFDARP 175
+ T P P PAP P PFL+ P
Sbjct: 834 SCTSPRSPLPAP-PRPFLYRRSP 855
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 37 AAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFP-ACRPGARF--GAARCHQSRENR 93
+A P + R PPRA PPP PP P P RPG+ GAA R
Sbjct: 769 SASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPL 828
Query: 94 LVSPAE-SDKMSGTPLPPPQF 113
P+ + S P PP F
Sbjct: 829 PAGPSSCTSPRSPLPAPPRPF 849
Score = 28.1 bits (61), Expect = 4.8
Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 36 SAAPPPPHPLSSRRGLGPPRAGGSPPP-TAPPTPTGSFPACRPGARFGAARCHQSRENRL 94
SA P P S R PP PPP P P A PGA F
Sbjct: 774 SAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIP--------- 824
Query: 95 VSPAESDKMSGTPLPPPQFSPPLPW 119
SP + S T P +PP P+
Sbjct: 825 RSPLPAGPSSCTSPRSPLPAPPRPF 849
>gi|61743942 abl-interactor 1 isoform a [Homo sapiens]
Length = 508
Score = 41.6 bits (96), Expect = 4e-04
Identities = 41/154 (26%), Positives = 52/154 (33%), Gaps = 16/154 (10%)
Query: 37 AAPPPPHPLSSRRGLGPPRAGGSPP--PTAPPTPTGSF---PACRPGARFGAARCHQSRE 91
A P P P + P G+PP P AP P + P PG+++G SR
Sbjct: 262 AVPTPSPPTIGPENISVPPPSGAPPAPPLAPLLPVSTVIAAPGSAPGSQYGTMTRQISRH 321
Query: 92 NRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGH 151
N S S TP QFS + G + + + L G
Sbjct: 322 NSTTSSTSSGGYRRTPSVTAQFSAQPHVNGGPLYSQNSISIAPPPPPMPQLTPQIPLTGF 381
Query: 152 VTR---------TPPLLPSPAPFPFPFLFDARPP 176
V R TPP P P P P D+ PP
Sbjct: 382 VARVQENIADSPTPP--PPPPPDDIPMFDDSPPP 413
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 41.2 bits (95), Expect = 5e-04
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 31 LWPDISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSR 90
LWP + PP P P SS + PP A P+G+ G AA S
Sbjct: 384 LWPPMGPFPPVPPPPSSGEAVAPPSTS-----AALSRPSGAATTTAAGTSATAASATASG 438
Query: 91 ENRLVSPAESDKMSGTPLPPPQFSPPLP 118
+P E+ G P PPP PLP
Sbjct: 439 PGSGSAP-EAGPAPGFPFPPPWMGMPLP 465
Score = 37.7 bits (86), Expect = 0.006
Identities = 41/150 (27%), Positives = 50/150 (33%), Gaps = 36/150 (24%)
Query: 38 APPPPHPLSSRRGLGPPRAGGSPP----------PTAPPTPTGSFPACRPGARFGAARCH 87
+PPPP P GPP A PP PP P G FP P F
Sbjct: 342 SPPPPEPADQ----GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPF------ 391
Query: 88 QSRENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRA 147
P SG + PP S L +GA G + A +
Sbjct: 392 --------PPVPPPPSSGEAVAPPSTSAALSRPSGAA------TTTAAGTSATAASATAS 437
Query: 148 APGHVTRTPPLLPSPA-PFPFPFLFDARPP 176
PG + P P+P PFP P++ PP
Sbjct: 438 GPGSGS-APEAGPAPGFPFPPPWMGMPLPP 466
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 41.2 bits (95), Expect = 5e-04
Identities = 31/92 (33%), Positives = 36/92 (39%), Gaps = 28/92 (30%)
Query: 35 ISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRL 94
+S A PP P + GPP G PPP PP P G P+ P A GA
Sbjct: 156 VSNAGGPPAPPAG----GPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGG-------- 203
Query: 95 VSPAESDKMSGTPLPPPQFSPPLPWSAGAGQG 126
PPP +PPLP + G G G
Sbjct: 204 --------------PPP--APPLPAAQGPGGG 219
Score = 33.1 bits (74), Expect = 0.15
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 33 PDISAAPPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSREN 92
P PPPP S AGG PPP APP P P G A +
Sbjct: 177 PPPPGPPPPPGLPPSGVPAAAHGAGGGPPP-APPLPAAQGPGGGGAGAPGLAAAIAGAKL 235
Query: 93 RLVSPAESDKMSGTPLPP 110
R VS + ++ SG P P
Sbjct: 236 RKVS--KQEEASGGPTAP 251
>gi|239753089 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 41.2 bits (95), Expect = 5e-04
Identities = 35/93 (37%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 42 PHPLSSRR--------GLGP-PRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSREN 92
PHP RR GL P P GSPP APPTPT AC AR G+ + S
Sbjct: 88 PHPQKGRRCCHRRCARGLRPAPLRSGSPPARAPPTPT--VAACDWNAREGS---YGSPPP 142
Query: 93 RLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQ 125
P +SD P P + + PL S G G+
Sbjct: 143 LAGPPCQSDDCPPPPPPSRRAAFPLEESEGWGR 175
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 41.2 bits (95), Expect = 5e-04
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 33 PDISAAPPPPHPLSSRRGLGPP-----RAGGSPPPTAPPTPTGSFPACRPGA 79
PD +A PPPP P ++ PP GG+PPP PP P G P GA
Sbjct: 359 PDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGA 410
Score = 39.7 bits (91), Expect = 0.002
Identities = 44/148 (29%), Positives = 48/148 (32%), Gaps = 31/148 (20%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTG--SFPACRPGARFGAARCHQSRENRLVS 96
PPP PL S G P+ G +PPP PP P P P FG+
Sbjct: 300 PPPAPPLGSPPG---PKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFP 356
Query: 97 PAESDKMSGTPLPPPQFS----PPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHV 152
P P PPP PP P S Q GG AP
Sbjct: 357 PHPDFAAPPPPPPPPAADYPTLPPPPLS------------QPTGG----------APPPP 394
Query: 153 TRTPPLLPSPAPFPFPFLFDARPPSLSE 180
PP P P PF A PP LS+
Sbjct: 395 PPPPPPGPPPPPFTGADGQPAIPPPLSD 422
Score = 39.3 bits (90), Expect = 0.002
Identities = 47/157 (29%), Positives = 55/157 (35%), Gaps = 39/157 (24%)
Query: 37 AAPPPPHPLSSRRGLGPP------RAGGSPPPTAPPT--PTGSFPACRPGARFGAARCHQ 88
A PPPP P+ G+ PP + G+PPP +PP+ P F A P AA
Sbjct: 321 APPPPPPPMI---GIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAA---- 373
Query: 89 SRENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAA 148
L P S G P PPP PP P F A
Sbjct: 374 -DYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPP----------------------PFTGA 410
Query: 149 PGHVTRTPPLLPSPAP-FPFPFLFDARPPSLSEGRAG 184
G PPL + P P + DAR LS R G
Sbjct: 411 DGQPAIPPPLSDTTKPKSSLPAVSDARSDLLSAIRQG 447
Score = 34.7 bits (78), Expect = 0.051
Identities = 41/157 (26%), Positives = 52/157 (33%), Gaps = 40/157 (25%)
Query: 39 PPPP----HPLSSRRG---LGPPRAGGSPPPTAPPTPT-GSFPACRPGARFGAARCHQSR 90
PPPP +P+ ++RG GP R+ P PP P GS P +PG A
Sbjct: 268 PPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPP 327
Query: 91 ENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPG 150
+ P G+P PP SPP +F P
Sbjct: 328 PMIGIPPPPPPVGFGSPGTPPPPSPP---------------------------SFPPHPD 360
Query: 151 HVTRTPPLLPSPAPFPFPFLFDARPPSLSEGRAGRRP 187
PP P A +P PP LS+ G P
Sbjct: 361 FAAPPPPPPPPAADYP-----TLPPPPLSQPTGGAPP 392
Score = 28.5 bits (62), Expect = 3.6
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 13/71 (18%)
Query: 96 SPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRT 155
SP+ S P PP +FS P+ G+G R + +P H
Sbjct: 257 SPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKR-------------SSVVSPSHPPPA 303
Query: 156 PPLLPSPAPFP 166
PPL P P P
Sbjct: 304 PPLGSPPGPKP 314
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 40.8 bits (94), Expect = 7e-04
Identities = 29/80 (36%), Positives = 29/80 (36%), Gaps = 20/80 (25%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPA 98
PPPP P G GPP G PP PP P G FP PG L P
Sbjct: 296 PPPPVP-----GYGPP-PGPPPPQQGPPPPPGPFPPRPPGP--------------LGPPL 335
Query: 99 ESDKMSGTPLPPPQFSPPLP 118
P PPP PP P
Sbjct: 336 TLAPPPHLPGPPPGAPPPAP 355
Score = 36.6 bits (83), Expect = 0.013
Identities = 45/163 (27%), Positives = 48/163 (29%), Gaps = 39/163 (23%)
Query: 39 PPPPHPLSS---RRGLGPPRAGGSPPPTAPPTPTGSF----------------PACRPGA 79
PPPP P R LGPP G P P PP P P PG
Sbjct: 226 PPPPFPAGQTPPRPPLGPP---GPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQ 282
Query: 80 RFGAARCHQSRENRLVSPAESDKMSGTPLPPPQFSPPL-PWSAGAGQGKRNRQLQENGGA 138
FG P G P P P + PP P G
Sbjct: 283 PFG-------------QPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPG 329
Query: 139 RLLLGAFRAAPGHVTRTPPLLPSPAPFPFPFLFDARPPSLSEG 181
L A P H+ PP P PAP P F PP + G
Sbjct: 330 PLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFF---PPPTNSG 369
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 40.8 bits (94), Expect = 7e-04
Identities = 51/170 (30%), Positives = 60/170 (35%), Gaps = 46/170 (27%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGA----------RFGAARCHQ 88
PPPP P PP PPP PP P+ S P+ A R A H
Sbjct: 629 PPPPPP--------PPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHS 680
Query: 89 S----------RENRLVSPAESDKMSG-TPLPPPQFSPPLPWSAGAGQGKRNRQLQENGG 137
+++ V P +G P PPP PP P SA A QL+
Sbjct: 681 GALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMA-------QLKPAPC 733
Query: 138 ARLLLGAFRAAP--------GHVTR-TPPLLPSPAPFPFPFLFDARPPSL 178
A L F A P H+T+ PP P P P P P A P L
Sbjct: 734 AP-SLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPL 782
Score = 34.7 bits (78), Expect = 0.051
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 27/126 (21%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPA 98
PPPP P+ P PPPTA PTP S PG + ++ SP
Sbjct: 929 PPPPSPV--------PAPPPPPPPTASPTPDKS---GSPG----------KKTSKTSSPG 967
Query: 99 ESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPPL 158
P P PQ + + S+GA + R ++ ++ A +P T PP
Sbjct: 968 -----GKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPA 1022
Query: 159 LPSPAP 164
P P P
Sbjct: 1023 AP-PKP 1027
Score = 32.3 bits (72), Expect = 0.25
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 38 APPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSP 97
A PPP PLS + A PPP PP +P A QS V
Sbjct: 848 AKPPPSPLSPVPSVVKQIASQFPPPPTPPAMES-----QPLKPVPANVAPQSPP--AVKA 900
Query: 98 AESDKMSGTPLPPPQFSPPLPWSA 121
+ S P+P P F PP P S+
Sbjct: 901 KPKWQPSSIPVPSPDFPPPPPESS 924
Score = 30.8 bits (68), Expect = 0.73
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 23/83 (27%)
Query: 37 AAPPPP---HPLSSRRGLGPPRAGGSPP------PTAPPTPTGSFPACRPGARFGAARCH 87
+APPPP H + + PP PP P APP P + PA
Sbjct: 741 SAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPA------------- 787
Query: 88 QSRENRLVSPAESDKMSGTPLPP 110
+ V+P + TP PP
Sbjct: 788 -PTSTKTVAPVVTQAAPPTPTPP 809
Score = 28.5 bits (62), Expect = 3.6
Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 23/100 (23%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPT-----------------APPTPTGSFPACRPGARF 81
PPPP P+ + PP+A P T APPTPT P + F
Sbjct: 763 PPPPPPIPAPL---PPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAF 819
Query: 82 GAARCHQSRENRLV---SPAESDKMSGTPLPPPQFSPPLP 118
A+ S V P + S PPP P+P
Sbjct: 820 PASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVP 859
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.8 bits (94), Expect = 7e-04
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 25/108 (23%)
Query: 33 PDISAAPP---PPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQS 89
P +++APP PP P SS PP+AGG PPP A G P PG
Sbjct: 155 PAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGP---------- 204
Query: 90 RENRLVSPAESDKMSGTPLP---PPQFSP---PLPWSAGAGQGKRNRQ 131
+ KM G P P P +P P P G G+ + RQ
Sbjct: 205 ------GGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQ 246
Score = 40.4 bits (93), Expect = 0.001
Identities = 44/143 (30%), Positives = 56/143 (39%), Gaps = 15/143 (10%)
Query: 33 PDISAAPPPPHPLSSR----RGLGP-PRAGGSPP-----PTAPPTPTGSFPACRPGARFG 82
P PPPP SS+ +G GP P G +PP P A P +G+ P PG
Sbjct: 93 PHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPT 152
Query: 83 AARCHQSRENRLVSPAESDKMSGTPLPPPQF-SPPLPWSAGAGQGKRNRQLQENGGAR-- 139
S +P + SG P PPQ PP P +A G G +Q GG +
Sbjct: 153 PPPAVTSAPPG--APPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGG 210
Query: 140 LLLGAFRAAPGHVTRTPPLLPSP 162
+ G + G TP P P
Sbjct: 211 KMPGGPKPGGGPGLSTPGGHPKP 233
Score = 29.6 bits (65), Expect = 1.6
Identities = 33/128 (25%), Positives = 43/128 (33%), Gaps = 22/128 (17%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVS-- 96
PPPPH + PP+ PPP PP P P +P + Q +V+
Sbjct: 62 PPPPHQQQQQ---PPPQ---QPPPQQPP-PHQPPPHPQPHQQQQPPPPPQDSSKPVVAQG 114
Query: 97 PAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTP 156
P + + P P P ++GA G G P VT P
Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGP-------------GPTPTPPPAVTSAP 161
Query: 157 PLLPSPAP 164
P P P P
Sbjct: 162 PGAPPPTP 169
Score = 28.9 bits (63), Expect = 2.8
Identities = 37/151 (24%), Positives = 46/151 (30%), Gaps = 18/151 (11%)
Query: 38 APPPPHPLSSRRG-LGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVS 96
+PPP L+ RG +GP P P PP P P + Q
Sbjct: 33 SPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQ----PPPQQPPPHQPP 88
Query: 97 PAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTP 156
P P PPPQ S + G G G A +AP T
Sbjct: 89 PHPQPHQQQQPPPPPQDSSKPVVAQGPGPAP---------GVGSAPPASSSAPPATPPTS 139
Query: 157 PLLPSPAPFPFPFLFDARPPSLSEGRAGRRP 187
P P P P PP+++ G P
Sbjct: 140 GAPPGSGPGPTP----TPPPAVTSAPPGAPP 166
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 40.4 bits (93), Expect = 0.001
Identities = 57/184 (30%), Positives = 66/184 (35%), Gaps = 35/184 (19%)
Query: 37 AAPPPPHPLSSRRGL----GPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQS--R 90
A P P LS L PPR S PP APP RP + +G+ R H
Sbjct: 646 APQPAPRTLSHWSALLSPPVPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWA 705
Query: 91 ENRLVSPAESDKMSGTPLPPPQFSPPLPWSAGAGQGKRN--RQLQENGGARLLLGA---- 144
V PA + PP SP +P A G R R + G A GA
Sbjct: 706 APAHVPPAPQASWWAF-VEPPAVSPEVPPDLLAFPGPRPSFRGSRRRGAAFGFPGASPRA 764
Query: 145 ---------------FRAAPGHVTRTPPLLPSP------APFPFPFLFDA-RPPSLSEGR 182
R++PG +P PSP PF PFL A RP SL E
Sbjct: 765 SRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPARRPRSLQESP 824
Query: 183 AGRR 186
A RR
Sbjct: 825 APRR 828
Score = 33.5 bits (75), Expect = 0.11
Identities = 37/119 (31%), Positives = 40/119 (33%), Gaps = 26/119 (21%)
Query: 30 RLWPDISAAPPPPHPLSSRRGL-GPPRAGG--------------SPPPTAPPTPTGSFPA 74
RL P S P P P S GL PR S PPT P P
Sbjct: 832 RLGPPGSPLPGSPRPPSPPLGLCHSPRRSSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPF 891
Query: 75 CRPGARFGAARCHQSRENRLVSPAESDKMSGTP---------LPPPQFSPPLPWSAGAG 124
RP R GA R P +S+ P +PP Q PP PW GAG
Sbjct: 892 HRP-PRAGAWRAPLEHRESPREPEDSETPWTVPPLAPSWDVDMPPTQ-RPPSPWPGGAG 948
Score = 28.5 bits (62), Expect = 3.6
Identities = 38/153 (24%), Positives = 49/153 (32%), Gaps = 19/153 (12%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSFPACRPGARFGAARCHQSRENRLVSPA 98
PP P S + P RA G P P P P P CH R + L P+
Sbjct: 812 PPARRPRSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPP-----LGLCHSPRRSSLNLPS 866
Query: 99 ESD----KMSGTPLPPPQFSPPLPWSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTR 154
++S P + LP+ G L+ R +
Sbjct: 867 RLPHTWRRLSEPPTRAVKPQVRLPFHRPPRAGAWRAPLEHRESPR---------EPEDSE 917
Query: 155 TPPLLPSPAP-FPFPFLFDARPPSLSEGRAGRR 186
TP +P AP + RPPS G AG R
Sbjct: 918 TPWTVPPLAPSWDVDMPPTQRPPSPWPGGAGSR 950
Score = 27.3 bits (59), Expect = 8.1
Identities = 27/99 (27%), Positives = 33/99 (33%), Gaps = 19/99 (19%)
Query: 39 PPPPHPLSSRRGLGPPRAGGSPPPTAP---------PTPTGSFPACRPGA---RFGAARC 86
PP P S G R G S PP P P P+ + P A R R
Sbjct: 934 PPTQRPPSPWPGGAGSRRGFSRPPPVPENPFLQLLGPVPSPTLQPEDPAADMTRVFLGRH 993
Query: 87 HQSRENRLVSPA-------ESDKMSGTPLPPPQFSPPLP 118
H+ +L A E + G P P + PP P
Sbjct: 994 HEPGPGQLTKSAGPTPEKPEEEATLGDPQLPAETKPPTP 1032
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 40.0 bits (92), Expect = 0.001
Identities = 40/130 (30%), Positives = 53/130 (40%), Gaps = 11/130 (8%)
Query: 60 PPPTAPPTPTGSFPACRPGARFGAARCHQSREN-RLVSPAESDKMSGTPLPPPQFSPPLP 118
PP T P PA R G GA R + RE R + S+ G + P L
Sbjct: 53 PPETLQP------PANRGGGPVGAPRVSRRREGLRALKVPGSEPQVGAEVRPSS-RKSLS 105
Query: 119 WSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVT-RTPPLLPSPAPF--PFPFLFDARP 175
G G+G+R R+ + G + G RA P T R PL+ + P F +R
Sbjct: 106 DHRGLGRGRRRRRQRRRWGTQAPCGRLRAKPALQTQRKEPLVFTQRSLLHSSPRWFSSRH 165
Query: 176 PSLSEGRAGR 185
S+SEG R
Sbjct: 166 SSISEGEGDR 175
>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
sapiens]
Length = 492
Score = 40.0 bits (92), Expect = 0.001
Identities = 48/148 (32%), Positives = 56/148 (37%), Gaps = 20/148 (13%)
Query: 41 PPHPLSSRRGLGPPRAG---GSPPPTAPPTP------TGSFPACRPGARFGAARCHQSRE 91
P L +RG+G G G+P PP P G R G AR + R
Sbjct: 323 PREKLGGKRGVGRKGQGTRLGAPHSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRW 382
Query: 92 NRLVSPAESDKMSGTPLPPPQFSPPLPWS---AGAGQGKRNRQLQENGGARLLLGAFRAA 148
L + S G P PP PP AGAG +L + G RL+ G A
Sbjct: 383 EPLRAQ-RSGARPGAPAPPLPCLPPAAVCHALAGAGAPGGRLELGLSPGTRLIRGGGAAV 441
Query: 149 PGHVTRTPPL-LP--SPAPFPFPF-LFD 172
P T PP LP P P P P LFD
Sbjct: 442 P---TAAPPAPLPRWGPGPLPGPTGLFD 466
>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
sapiens]
Length = 492
Score = 40.0 bits (92), Expect = 0.001
Identities = 48/148 (32%), Positives = 56/148 (37%), Gaps = 20/148 (13%)
Query: 41 PPHPLSSRRGLGPPRAG---GSPPPTAPPTP------TGSFPACRPGARFGAARCHQSRE 91
P L +RG+G G G+P PP P G R G AR + R
Sbjct: 323 PREKLGGKRGVGRKGQGTRLGAPHSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRW 382
Query: 92 NRLVSPAESDKMSGTPLPPPQFSPPLPWS---AGAGQGKRNRQLQENGGARLLLGAFRAA 148
L + S G P PP PP AGAG +L + G RL+ G A
Sbjct: 383 EPLRAQ-RSGARPGAPAPPLPCLPPAAVCHALAGAGAPGGRLELGLSPGTRLIRGGGAAV 441
Query: 149 PGHVTRTPPL-LP--SPAPFPFPF-LFD 172
P T PP LP P P P P LFD
Sbjct: 442 P---TAAPPAPLPRWGPGPLPGPTGLFD 466
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,253,070
Number of Sequences: 37866
Number of extensions: 892247
Number of successful extensions: 13397
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 1019
Number of HSP's that attempted gapping in prelim test: 7632
Number of HSP's gapped (non-prelim): 5045
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.