Search of human proteins with 169202586

Search of human proteins with 169202586

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169202586 PREDICTED: hypothetical protein [Homo sapiens]
         (289 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169203411 PREDICTED: hypothetical protein [Homo sapiens]           595   e-170
gi|169202586 PREDICTED: hypothetical protein [Homo sapiens]           595   e-170
gi|239755517 PREDICTED: hypothetical protein [Homo sapiens]           405   e-113
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       37   0.026
gi|148612825 Rap GTPase interactor [Homo sapiens]                      36   0.045
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ...    33   0.22 
gi|26190608 synaptojanin 2 [Homo sapiens]                              33   0.22 
gi|38683860 insulin receptor substrate 2 [Homo sapiens]                33   0.38 
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    32   0.85 
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    32   0.85 
gi|239754364 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|239748911 PREDICTED: hypothetical protein XP_002346854 [Homo ...    31   1.4  
gi|239742935 PREDICTED: hypothetical protein XP_002342692 [Homo ...    31   1.4  
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         31   1.4  
gi|223633935 hypothetical protein LOC254427 [Homo sapiens]             30   1.9  
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]                       30   3.2  
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]                       30   3.2  
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]                       30   3.2  
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]                       30   3.2  
gi|39995093 parathyroid hormone-like hormone isoform 1 prepropro...    29   4.2  
gi|39995091 parathyroid hormone-like hormone isoform 1 prepropro...    29   4.2  
gi|39995089 parathyroid hormone-like hormone isoform 2 prepropro...    29   4.2  
gi|4506269 parathyroid hormone-like hormone isoform 2 preproprot...    29   4.2  
gi|4827004 single-minded homolog 2 long isoform [Homo sapiens]         29   4.2  
gi|148528998 Dmx-like 1 [Homo sapiens]                                 29   4.2  
gi|239753461 PREDICTED: hypothetical protein XP_002345664 [Homo ...    29   5.5  
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        29   5.5  
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        29   5.5  
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         29   5.5  
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         29   5.5  

>gi|169203411 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 289

 Score =  595 bits (1534), Expect = e-170
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 1   MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL 60
           MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL
Sbjct: 1   MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL 60

Query: 61  DHLRGILGVSGSMLGCSSLNECQVHCISTTNWTATLVRAGPRLGCCPRKIGAENALVLSE 120
           DHLRGILGVSGSMLGCSSLNECQVHCISTTNWTATLVRAGPRLGCCPRKIGAENALVLSE
Sbjct: 61  DHLRGILGVSGSMLGCSSLNECQVHCISTTNWTATLVRAGPRLGCCPRKIGAENALVLSE 120

Query: 121 FSSVRQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAP 180
           FSSVRQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAP
Sbjct: 121 FSSVRQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAP 180

Query: 181 RSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEP 240
           RSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEP
Sbjct: 181 RSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEP 240

Query: 241 ALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSNLS 289
           ALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSNLS
Sbjct: 241 ALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSNLS 289


>gi|169202586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 289

 Score =  595 bits (1534), Expect = e-170
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 1   MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL 60
           MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL
Sbjct: 1   MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL 60

Query: 61  DHLRGILGVSGSMLGCSSLNECQVHCISTTNWTATLVRAGPRLGCCPRKIGAENALVLSE 120
           DHLRGILGVSGSMLGCSSLNECQVHCISTTNWTATLVRAGPRLGCCPRKIGAENALVLSE
Sbjct: 61  DHLRGILGVSGSMLGCSSLNECQVHCISTTNWTATLVRAGPRLGCCPRKIGAENALVLSE 120

Query: 121 FSSVRQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAP 180
           FSSVRQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAP
Sbjct: 121 FSSVRQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAP 180

Query: 181 RSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEP 240
           RSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEP
Sbjct: 181 RSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEP 240

Query: 241 ALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSNLS 289
           ALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSNLS
Sbjct: 241 ALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSNLS 289


>gi|239755517 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 369

 Score =  405 bits (1041), Expect = e-113
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 93  TATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAGLAPAAVSPALDAGEGYGDERVKD 152
           TATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAGLAPAAVSPALDAGEGYGDERVKD
Sbjct: 173 TATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAGLAPAAVSPALDAGEGYGDERVKD 232

Query: 153 VQRDSRDFGGHLNSVACCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQ 212
           VQRDSRDFGGHLNSVACCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQ
Sbjct: 233 VQRDSRDFGGHLNSVACCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQ 292

Query: 213 GLSSESRNYQDRDPPTQYSNLYTYLEEPALPPGKHPWGAGRGRRERAGRRGAASSWLQCG 272
           GLSSESRNYQDRDPPTQYSNLYTYLEEPALPPGKHPWGAGRGRRERAGRRGAASSWLQCG
Sbjct: 293 GLSSESRNYQDRDPPTQYSNLYTYLEEPALPPGKHPWGAGRGRRERAGRRGAASSWLQCG 352

Query: 273 RDRRAPVAPRPRWSNLS 289
           RDRRAPVAPRPRWSNLS
Sbjct: 353 RDRRAPVAPRPRWSNLS 369



 Score =  142 bits (358), Expect = 3e-34
 Identities = 68/68 (100%), Positives = 68/68 (100%)

Query: 1  MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL 60
          MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL
Sbjct: 1  MASYWAFSFETQGFSSWVLSHRFLDGEVDKQLSFNHKVKAKLMQERFLGRLDQGVPNSSL 60

Query: 61 DHLRGILG 68
          DHLRGILG
Sbjct: 61 DHLRGILG 68


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 36.6 bits (83), Expect = 0.026
 Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 174 PSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNL 233
           P   R+P SPS P+    R   +P S +S +  R++    +       Q R PP      
Sbjct: 380 PQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQRRS---PVPPSCPAPQPRPPPPPPPGE 436

Query: 234 YTYLEEP-ALPPGKHPWGAGRGRR------ERAGRRGAASSWLQCGRDRRAPVAPRPR 284
            T  E   A PP  H     +GRR      E A   GA+  WLQ      A   P+PR
Sbjct: 437 RTLAERAYAKPPSHHVKAGFQGRRSYSELAEGAAYAGASPPWLQA----EAATLPKPR 490


>gi|148612825 Rap GTPase interactor [Homo sapiens]
          Length = 1075

 Score = 35.8 bits (81), Expect = 0.045
 Identities = 40/128 (31%), Positives = 44/128 (34%), Gaps = 15/128 (11%)

Query: 171 LAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQY 230
           L  PS P APR P   A  VA    LPL       W +A   G        Q   P T  
Sbjct: 844 LEAPSCPLAPRDPGPAAREVAPERTLPL---RGAPWAQA-PPGRQPSRGGSQAGPPHTDS 899

Query: 231 SNLYTYLEEPALP-PGKHPWGAGRG----------RRERAGRRGAASSWLQCGRDRRAPV 279
           S L T    P  P PG   W    G          R   +G RGAA           +P 
Sbjct: 900 SCLLTPPSTPLGPEPGDPDWPESGGPCGKALPERQRNGLSGLRGAAPEGDSAALAEESPP 959

Query: 280 APRPRWSN 287
           AP  R S+
Sbjct: 960 APSSRSSS 967


>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
            sapiens]
          Length = 2036

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 206  WRKAGTQGLSSESRNYQDRDPPTQYSNLYT--YLEEPALPPGKHPWGAGRGRRERAGR-R 262
            WRK GT G+  ++  ++  DP T  +   +   +E   LPP  +   AG+   E  G  R
Sbjct: 1856 WRKEGTPGIFQKTAIWEAPDPDTTPAVCKSAGVVENQILPPETNSEDAGKEGSEVQGEPR 1915

Query: 263  GAASSWLQCGRDRRA 277
               S W  CG  +RA
Sbjct: 1916 SPESEWF-CGTRKRA 1929


>gi|26190608 synaptojanin 2 [Homo sapiens]
          Length = 1496

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 120  EFSSVRQGAGLAPAAVSPALDAGEGY----GDERVKDVQRDSRDFGGHLN-SVACCLAVP 174
            + S V     LAP + SPAL   + +     D  + +++R+    G   + S +  L+VP
Sbjct: 1040 DLSDVPGPTALAPPSKSPALTKKKQHPTYKDDADLVELKRELEAVGEFRHRSPSRSLSVP 1099

Query: 175  SLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQG 213
            + PR P+ P RP      ++    SD S +S    GT G
Sbjct: 1100 NRPRPPQPPQRPPPPTGLMVKKSASDASISS----GTHG 1134


>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
          Length = 1338

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 25/142 (17%)

Query: 130  LAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAPRSPSR---- 185
            + P+ V P+    EG+  +R + V+       G L S+      P LP  P+SP      
Sbjct: 865  VVPSPVRPSGGRPEGFLGQRGRAVRPTRLSLEG-LPSLPSMHEYP-LPPEPKSPGEYINI 922

Query: 186  --------------PALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYS 231
                          P LA A   +  LS  S  S   +GT G SS+SR    R P + Y 
Sbjct: 923  DFGEPGARLSPPAPPLLASAASSSSLLSASSPASSLGSGTPGTSSDSR---QRSPLSDYM 979

Query: 232  NLYTYLEEPALP--PGKHPWGA 251
            NL     +   P  P  HP G+
Sbjct: 980  NLDFSSPKSPKPGAPSGHPVGS 1001


>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 16/163 (9%)

Query: 125 RQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAPRSPS 184
           R  A L   A+     AGEG G  RVK   R        L        +P++    RS  
Sbjct: 83  RLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFV---LKDSPVRDLLPTVNSLTRSTP 139

Query: 185 RPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEPALPP 244
            P+    RL     S++   S R    +  S +  +   R+ PT   NL+   + PA  P
Sbjct: 140 SPSSLTPRL----RSNDRKGSVR--ALRATSGKRPSNMKRESPT--CNLFPASKSPASSP 191

Query: 245 GKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSN 287
                   RGR   +GR  A+          R+ +AP+P  SN
Sbjct: 192 LTRSTPPVRGRAGPSGRAAASPP-----TPIRSVLAPQPSTSN 229


>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 16/163 (9%)

Query: 125 RQGAGLAPAAVSPALDAGEGYGDERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAPRSPS 184
           R  A L   A+     AGEG G  RVK   R        L        +P++    RS  
Sbjct: 83  RLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFV---LKDSPVRDLLPTVNSLTRSTP 139

Query: 185 RPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSNLYTYLEEPALPP 244
            P+    RL     S++   S R    +  S +  +   R+ PT   NL+   + PA  P
Sbjct: 140 SPSSLTPRL----RSNDRKGSVR--ALRATSGKRPSNMKRESPT--CNLFPASKSPASSP 191

Query: 245 GKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWSN 287
                   RGR   +GR  A+          R+ +AP+P  SN
Sbjct: 192 LTRSTPPVRGRAGPSGRAAASPP-----TPIRSVLAPQPSTSN 229


>gi|239754364 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 189

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 9/56 (16%)

Query: 240 PALPPGKHPW---------GAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWS 286
           P LPP +  W         GA  GR  R  R+G +S+       R AP AP  R S
Sbjct: 103 PPLPPRQGQWPGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSS 158


>gi|239748911 PREDICTED: hypothetical protein XP_002346854 [Homo
           sapiens]
          Length = 189

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 9/56 (16%)

Query: 240 PALPPGKHPW---------GAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWS 286
           P LPP +  W         GA  GR  R  R+G +S+       R AP AP  R S
Sbjct: 103 PPLPPRQGQWPGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSS 158


>gi|239742935 PREDICTED: hypothetical protein XP_002342692 [Homo
           sapiens]
          Length = 189

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 9/56 (16%)

Query: 240 PALPPGKHPW---------GAGRGRRERAGRRGAASSWLQCGRDRRAPVAPRPRWS 286
           P LPP +  W         GA  GR  R  R+G +S+       R AP AP  R S
Sbjct: 103 PPLPPRQGQWPGTARVRAGGAVAGRSTRQSRQGGSSASSGAAPPREAPAAPAVRSS 158


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 243 PPGKHP-WGAGRGRRER--AGRRGAASSWLQCGRDRRAPVAPRPRWSNLS 289
           PP K P     RG R+R   GR G+     Q G++ +AP AP  R   LS
Sbjct: 844 PPAKRPNTSPDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLS 893


>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
          Length = 435

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 169 CCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRD--- 225
           CCL  PSL  +  SPS P   +  +   P + E+          G +   + ++ +D   
Sbjct: 87  CCLCSPSLEESTSSPSEPEDVIDLVQPAPGAGEAEGLPEGTQAAGPAPAGKEHRKQDAET 146

Query: 226 -PPTQYSNLYTYLEEPALPPGKHP 248
            PP       T L  P LP    P
Sbjct: 147 PPPPDPPAPETLLAPPPLPSTPDP 170


>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
          Length = 844

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 17/110 (15%)

Query: 169 CCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPT 228
           CC A+P           P L   R  +   SD SS+S  ++ +   SS       R    
Sbjct: 5   CCSALPP----------PPLEKGRCSSY--SDSSSSSSERSSSSSSSSSESGSSSRSSSN 52

Query: 229 QYSNLYTYLEEPALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAP 278
             S     +  PA PP   P    + R   A R  A S     G  RR P
Sbjct: 53  NSS-----ISRPAAPPEPRPQQQPQPRSPAARRAAARSRAAAAGGMRRDP 97


>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
          Length = 852

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 17/110 (15%)

Query: 169 CCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPT 228
           CC A+P           P L   R  +   SD SS+S  ++ +   SS       R    
Sbjct: 5   CCSALPP----------PPLEKGRCSSY--SDSSSSSSERSSSSSSSSSESGSSSRSSSN 52

Query: 229 QYSNLYTYLEEPALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAP 278
             S     +  PA PP   P    + R   A R  A S     G  RR P
Sbjct: 53  NSS-----ISRPAAPPEPRPQQQPQPRSPAARRAAARSRAAAAGGMRRDP 97


>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
          Length = 858

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 17/110 (15%)

Query: 169 CCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPT 228
           CC A+P           P L   R  +   SD SS+S  ++ +   SS       R    
Sbjct: 5   CCSALPP----------PPLEKGRCSSY--SDSSSSSSERSSSSSSSSSESGSSSRSSSN 52

Query: 229 QYSNLYTYLEEPALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAP 278
             S     +  PA PP   P    + R   A R  A S     G  RR P
Sbjct: 53  NSS-----ISRPAAPPEPRPQQQPQPRSPAARRAAARSRAAAAGGMRRDP 97


>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
          Length = 850

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 17/110 (15%)

Query: 169 CCLAVPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPT 228
           CC A+P           P L   R  +   SD SS+S  ++ +   SS       R    
Sbjct: 5   CCSALPP----------PPLEKGRCSSY--SDSSSSSSERSSSSSSSSSESGSSSRSSSN 52

Query: 229 QYSNLYTYLEEPALPPGKHPWGAGRGRRERAGRRGAASSWLQCGRDRRAP 278
             S     +  PA PP   P    + R   A R  A S     G  RR P
Sbjct: 53  NSS-----ISRPAAPPEPRPQQQPQPRSPAARRAAARSRAAAAGGMRRDP 97


>gi|39995093 parathyroid hormone-like hormone isoform 1
           preproprotein [Homo sapiens]
          Length = 177

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 228 TQYSN-LYTYLEEPALPPGKHPWG-AGRGRRERAGRRGAASSWLQCG 272
           TQ +N + TY E+P   PGK   G  G+ + +   +R   S+WL  G
Sbjct: 105 TQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLDSG 151


>gi|39995091 parathyroid hormone-like hormone isoform 1
           preproprotein [Homo sapiens]
          Length = 177

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 228 TQYSN-LYTYLEEPALPPGKHPWG-AGRGRRERAGRRGAASSWLQCG 272
           TQ +N + TY E+P   PGK   G  G+ + +   +R   S+WL  G
Sbjct: 105 TQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLDSG 151


>gi|39995089 parathyroid hormone-like hormone isoform 2
           preproprotein [Homo sapiens]
          Length = 175

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 228 TQYSN-LYTYLEEPALPPGKHPWG-AGRGRRERAGRRGAASSWLQCG 272
           TQ +N + TY E+P   PGK   G  G+ + +   +R   S+WL  G
Sbjct: 105 TQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLDSG 151


>gi|4506269 parathyroid hormone-like hormone isoform 2 preproprotein
           [Homo sapiens]
          Length = 175

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 228 TQYSN-LYTYLEEPALPPGKHPWG-AGRGRRERAGRRGAASSWLQCG 272
           TQ +N + TY E+P   PGK   G  G+ + +   +R   S+WL  G
Sbjct: 105 TQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLDSG 151


>gi|4827004 single-minded homolog 2 long isoform [Homo sapiens]
          Length = 667

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 12/92 (13%)

Query: 173 VPSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRNYQDRDPPTQYSN 232
           VPS     ++P  P    AR   +P  +  + + R+ G           +D  PP+ + +
Sbjct: 498 VPSSSSPAKNPPEPPANTARHSLVPSYEAPAAAVRRFG-----------EDTAPPS-FPS 545

Query: 233 LYTYLEEPALPPGKHPWGAGRGRRERAGRRGA 264
              Y EEPAL P K    A R     A  R A
Sbjct: 546 CGHYREEPALGPAKAARQAARDGARLALARAA 577


>gi|148528998 Dmx-like 1 [Homo sapiens]
          Length = 3027

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 18/47 (38%), Positives = 21/47 (44%)

Query: 174  PSLPRAPRSPSRPALAVARLLALPLSDESSTSWRKAGTQGLSSESRN 220
            PS      S   PA +   LLA   SDE    WR   T G S+ S+N
Sbjct: 968  PSAGHLSSSSIYPACSAPYLLATSCSDEKVRFWRCRVTDGESATSKN 1014


>gi|239753461 PREDICTED: hypothetical protein XP_002345664 [Homo
           sapiens]
          Length = 114

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 202 SSTSWRKAGTQGL---SSESRNYQDRDPPTQYSNLYTYLEEPALPPGKHPWGAGRGRRER 258
           +ST   +AG+Q     +S +R+++  +P  +        +EPA    + P GA R RR R
Sbjct: 30  TSTGTVRAGSQTFKRRASPARSHEPGNPQVEQRRPLASADEPARRSRRQPLGASRLRRRR 89


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 90  TNWTATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAG---LAPAAVSPALDAGEGYG 146
           T W+  L     +L CC      ENA     FS VR+  G       A+           
Sbjct: 702 TQWSWML-----QLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSAT 756

Query: 147 DERVKDVQRDSRD-------FGGHLNSVA--CCLAVPSLPRAPRSPSR---PALAV 190
             R++D+ +D++D       + GHL+ +A      V   PR P  P R   P LAV
Sbjct: 757 VTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPLLAV 812


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 90  TNWTATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAG---LAPAAVSPALDAGEGYG 146
           T W+  L     +L CC      ENA     FS VR+  G       A+           
Sbjct: 706 TQWSWML-----QLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSAT 760

Query: 147 DERVKDVQRDSRD-------FGGHLNSVA--CCLAVPSLPRAPRSPSR---PALAV 190
             R++D+ +D++D       + GHL+ +A      V   PR P  P R   P LAV
Sbjct: 761 VTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPLLAV 816


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 90  TNWTATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAG---LAPAAVSPALDAGEGYG 146
           T W+  L     +L CC      ENA     FS VR+  G       A+           
Sbjct: 702 TQWSWML-----QLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSAT 756

Query: 147 DERVKDVQRDSRD-------FGGHLNSVA--CCLAVPSLPRAPRSPSR---PALAV 190
             R++D+ +D++D       + GHL+ +A      V   PR P  P R   P LAV
Sbjct: 757 VTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPLLAV 812


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 90  TNWTATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAG---LAPAAVSPALDAGEGYG 146
           T W+  L     +L CC      ENA     FS VR+  G       A+           
Sbjct: 670 TQWSWML-----QLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSAT 724

Query: 147 DERVKDVQRDSRD-------FGGHLNSVA--CCLAVPSLPRAPRSPSR---PALAV 190
             R++D+ +D++D       + GHL+ +A      V   PR P  P R   P LAV
Sbjct: 725 VTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPLLAV 780


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,874,041
Number of Sequences: 37866
Number of extensions: 641278
Number of successful extensions: 2472
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 2457
Number of HSP's gapped (non-prelim): 63
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.