Guide to the Human Genome
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Name: NOL8 Sequence: fasta or formatted (1167aa) NCBI GI: 46048234
Description:

nucleolar protein 8

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         58           2
 C cysteine            1.4         16           1
 D aspartate           7.5         87           3
 E glutamate          10.0        117           4
 F phenylalanine       3.3         38           4
 G glycine             5.1         59           2
 H histidine           2.3         27           1
 I isoleucine          3.8         44           2
 K lysine             11.9        139           3
 L leucine             6.3         74           2
 M methionine          2.0         23           2
 N asparagine          4.8         56           2
 P proline             4.3         50           2
 Q glutamine           4.1         48           3
 R arginine            5.1         60           2
 S serine             11.1        130           4
 T threonine           5.9         69           3
 V valine              4.2         49           2
 W tryptophan          0.7          8           1
 Y tyrosine            1.3         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein 8 
ATRX                  0.029   transcriptional regulator ATRX isoform 2 
ATRX                  0.029   transcriptional regulator ATRX isoform 1 
DSPP                  0.019   dentin sialophosphoprotein preproprotein 
IWS1                  0.016   IWS1 homolog 
BOD1L                 0.014   biorientation of chromosomes in cell division 1-like...
NKTR                  0.014   natural killer-tumor recognition sequence 
CALD1                 0.014   caldesmon 1 isoform 1 
EIF5B                 0.014   eukaryotic translation initiation factor 5B 
SAFB                  0.013   scaffold attachment factor B 
ANLN                  0.013   anillin, actin binding protein 
NEFH                  0.013   neurofilament, heavy polypeptide 200kDa 
RBBP6                 0.013   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.013   retinoblastoma-binding protein 6 isoform 1 
ANKRD11               0.012   ankyrin repeat domain 11 
SAFB2                 0.012   scaffold attachment factor B2 
MYH10                 0.011   myosin, heavy polypeptide 10, non-muscle 
PPIG                  0.011   peptidylprolyl isomerase G 
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
BRWD1                 0.011   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.011   bromodomain and WD repeat domain containing 1 isofor...
CYLC1                 0.010   cylicin, basic protein of sperm head cytoskeleton 1...
KRI1                  0.010   KRI1 homolog 
NOLC1                 0.010   nucleolar and coiled-body phosphoprotein 1 
SLTM                  0.010   modulator of estrogen induced transcription isoform ...
SLTM                  0.010   modulator of estrogen induced transcription isoform ...
ROCK2                 0.010   Rho-associated, coiled-coil containing protein kinas...
RBM22                 0.010   RNA binding motif protein 22 
MDN1                  0.010   MDN1, midasin homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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