Guide to the Human Genome
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Name: CPS1 Sequence: fasta or formatted (1049aa) NCBI GI: 170295797
Description:

carbamoyl-phosphate synthetase 1 isoform c

Referenced in:

Mitochondria
Pyrimidine Biosynthesis and Catabolism
Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt prot [1506aa] carbamoyl-phosphate synthetase 1 isoform a precursor
alt prot [1500aa] carbamoyl-phosphate synthetase 1 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         82           2
 C cysteine            1.8         19           1
 D aspartate           5.2         55           2
 E glutamate           7.2         76           2
 F phenylalanine       4.1         43           1
 G glycine             6.2         65           2
 H histidine           1.9         20           1
 I isoleucine          6.7         70           2
 K lysine              6.4         67           2
 L leucine             8.6         90           2
 M methionine          3.0         31           2
 N asparagine          4.7         49           3
 P proline             4.5         47           1
 Q glutamine           3.1         33           2
 R arginine            4.3         45           2
 S serine              7.3         77           2
 T threonine           5.6         59           1
 V valine              8.2         86           3
 W tryptophan          1.0         10           1
 Y tyrosine            2.4         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbamoyl-phosphate synthetase 1 isoform c 
CPS1                  1.000   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  1.000   carbamoyl-phosphate synthetase 1 isoform b precursor...
CAD                   0.496   carbamoylphosphate synthetase 2/aspartate transcarba...
ACACA                 0.019   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.019   acetyl-Coenzyme A carboxylase alpha isoform 4 
ACACA                 0.019   acetyl-Coenzyme A carboxylase alpha isoform 3 
ACACA                 0.019   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.019   acetyl-Coenzyme A carboxylase alpha isoform 1 
MCCC1                 0.018   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr...
PC                    0.015   pyruvate carboxylase precursor 
PC                    0.015   pyruvate carboxylase precursor 
PC                    0.015   pyruvate carboxylase precursor 
PCCA                  0.014   propionyl-Coenzyme A carboxylase, alpha polypeptide ...
PCCA                  0.014   propionyl-Coenzyme A carboxylase, alpha polypeptide...
ACACB                 0.014   acetyl-Coenzyme A carboxylase beta 
GART                  0.006   phosphoribosylglycinamide formyltransferase, phospho...
GART                  0.006   phosphoribosylglycinamide formyltransferase, phosphor...
GART                  0.006   phosphoribosylglycinamide formyltransferase, phosph...
GART                  0.006   phosphoribosylglycinamide formyltransferase, phosph...
ATPGD1                0.005   ATP-grasp domain containing 1 
ABCA6                 0.004   ATP-binding cassette, sub-family A, member 6 
TMEM116               0.003   transmembrane protein 116 
UTRN                  0.003   utrophin 
CABLES1               0.002   Cdk5 and Abl enzyme substrate 1 isoform 2 
CABLES1               0.002   Cdk5 and Abl enzyme substrate 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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