Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169173357
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169173357 PREDICTED: hypothetical protein [Homo sapiens]
(200 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169173357 PREDICTED: hypothetical protein [Homo sapiens] 417 e-117
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 41 8e-04
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 40 0.002
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 39 0.004
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.005
gi|163965366 nascent polypeptide-associated complex alpha subuni... 36 0.019
gi|47078278 choline kinase alpha isoform b [Homo sapiens] 35 0.033
gi|47078276 choline kinase alpha isoform a [Homo sapiens] 35 0.033
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 35 0.033
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 35 0.033
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 35 0.043
gi|239757559 PREDICTED: hypothetical protein [Homo sapiens] 35 0.043
gi|55750053 atrophin-1 [Homo sapiens] 35 0.043
gi|55750041 atrophin-1 [Homo sapiens] 35 0.043
gi|116292168 KRAB A domain containing 1 [Homo sapiens] 35 0.043
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 34 0.073
gi|239752706 PREDICTED: hypothetical protein [Homo sapiens] 34 0.095
gi|239747242 PREDICTED: hypothetical protein [Homo sapiens] 34 0.095
gi|110832843 TBP-associated factor 4 [Homo sapiens] 34 0.095
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 34 0.095
gi|50511941 EMI domain containing 1 [Homo sapiens] 34 0.095
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|239741063 PREDICTED: hypothetical protein XP_002342081 [Homo ... 33 0.12
gi|19924099 synapsin I isoform Ia [Homo sapiens] 33 0.12
gi|19924097 synapsin I isoform Ib [Homo sapiens] 33 0.12
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 33 0.12
gi|116174748 developing brain homeobox 2 [Homo sapiens] 33 0.12
gi|7706501 WW domain binding protein 11 [Homo sapiens] 33 0.12
gi|239753493 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 33 0.16
>gi|169173357 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 417 bits (1071), Expect = e-117
Identities = 200/200 (100%), Positives = 200/200 (100%)
Query: 1 MNLTTEIHSPSERFKKSSAFCRATPILHAVSRRRARQFLLRFSSKAHCLLPPHPQVAEAR 60
MNLTTEIHSPSERFKKSSAFCRATPILHAVSRRRARQFLLRFSSKAHCLLPPHPQVAEAR
Sbjct: 1 MNLTTEIHSPSERFKKSSAFCRATPILHAVSRRRARQFLLRFSSKAHCLLPPHPQVAEAR 60
Query: 61 MATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKGSAQLGTR 120
MATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKGSAQLGTR
Sbjct: 61 MATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKGSAQLGTR 120
Query: 121 RPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPLRLTTYPPPFF 180
RPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPLRLTTYPPPFF
Sbjct: 121 RPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPLRLTTYPPPFF 180
Query: 181 LSKYPDQSISPRRTRTAGSD 200
LSKYPDQSISPRRTRTAGSD
Sbjct: 181 LSKYPDQSISPRRTRTAGSD 200
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 40.8 bits (94), Expect = 8e-04
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 32/169 (18%)
Query: 52 PHPQVA--EARMATHGHPQASLRSS-HRPPAHCGAPARQCQQQVGTAS------------ 96
P P +A EA++ +H AS R+S H+PP + T S
Sbjct: 453 PIPTLARTEAKITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVPPTS 512
Query: 97 --ATLLGGPGVPWGTNPKGSAQLGTRRPLGRLL--QAGTR--PARPTPHGRRRLHVSAPL 150
+T P VP GSA G+++P+G +AG + P +P P + PL
Sbjct: 513 GTSTPRTAPAVP----TPGSAPTGSKKPIGSEASKKAGPKSSPRKPVPLRPGKAARDVPL 568
Query: 151 QAQEARGVTWRPGPASPAPLRLTTYPPPFFLSKYPDQSISPRRTRTAGS 199
+T RP P P P + TT P L+ S SPR T + S
Sbjct: 569 S-----DLTTRPSPRQPQPSQQTT--PALVLAPAQFLSSSPRPTSSGYS 610
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 24/126 (19%)
Query: 65 GHPQASLRSSHRP----PAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKGSAQLGTR 120
G P A L S P P APA + + +A+ GGPG P G +++L T
Sbjct: 1378 GAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGL----TSELETS 1433
Query: 121 RPLGRLLQA---------GTRPARPTPHGRRRLHVSAPLQ-----AQEARGVTWRPGPA- 165
+PL +A G P P P SAP + A E + P PA
Sbjct: 1434 QPLAETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQPAL 1493
Query: 166 -SPAPL 170
PAPL
Sbjct: 1494 GQPAPL 1499
Score = 29.3 bits (64), Expect = 2.3
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 95 ASATLLGGPGVPWGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQE 154
A A L+ PG P G +GT+ P + A A P P G R +A ++ ++
Sbjct: 97 APAALVAQPGAPGAPADAGPEPVGTQEPGPDPIAAAVETA-PAPDGGPREEAAATVRKED 155
Query: 155 ARGVTWRPGP 164
+P P
Sbjct: 156 EGAAEAKPEP 165
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 38.5 bits (88), Expect = 0.004
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQ---QQVGTASATLLGGPGVPW 107
P P+V + T + R + RP APAR Q G+ S+ P +P
Sbjct: 542 PASPKVTRSPPETAAPVEDMARRTKRP-----APARPTMPPPQVSGSRSSP--PAPPLPP 594
Query: 108 GTNPKGSAQLGTRRPLGRLLQAGT--RPARPTP-HGRRRLHVSAPLQAQEARGVTWRPGP 164
G+ G+ Q RR +G L+A T P PTP RR +P A PGP
Sbjct: 595 GSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPAS-----PGP 649
Query: 165 ASPAPLRLT 173
ASP+P+ L+
Sbjct: 650 ASPSPVSLS 658
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.1 bits (87), Expect = 0.005
Identities = 39/128 (30%), Positives = 45/128 (35%), Gaps = 10/128 (7%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTN 110
P P+ A A A P P APAR + A+A GP P G
Sbjct: 112 PRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP-GPR 170
Query: 111 PKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPL 170
+ +A L P PA P G RR AP A AR P P PAP
Sbjct: 171 AQRAAPLAAPPPA-----PAAPPAVAPPAGPRR----APPPAVAAREPPLPPPPQPPAPP 221
Query: 171 RLTTYPPP 178
+ PPP
Sbjct: 222 QQQQPPPP 229
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.2 bits (82), Expect = 0.019
Identities = 36/149 (24%), Positives = 44/149 (29%), Gaps = 13/149 (8%)
Query: 43 SSKAHCLLPPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGG 102
S K PPH AT P+ L + A A + G A+ G
Sbjct: 1112 SPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGA 1171
Query: 103 PGVPWGTNPKGSAQLGTRRPLGRLLQAGTRP-------ARPTPHGRRRLHVSAP------ 149
P P T P L T P G P A P+P G + P
Sbjct: 1172 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1231
Query: 150 LQAQEARGVTWRPGPASPAPLRLTTYPPP 178
L +G P P+P PPP
Sbjct: 1232 LATPSPKGAPTTPAATPPSPKGGPATPPP 1260
Score = 35.4 bits (80), Expect = 0.033
Identities = 39/139 (28%), Positives = 49/139 (35%), Gaps = 17/139 (12%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRP------PAHCGAP----ARQCQQQVGTASATLL 100
PP P+ A + G P + P P H GAP A + G A+
Sbjct: 1087 PPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK 1146
Query: 101 GGPGVPWGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVT- 159
G P P T P L T P G A T PA P + L +P A T
Sbjct: 1147 GAPTTPAATPPSPKGGLATPPPKG----APTTPAATPPSPKGGLATPSPKGAPTTPAATP 1202
Query: 160 --WRPGPASPAPLRLTTYP 176
+ G A+P+P T P
Sbjct: 1203 PSPKGGLATPSPKGAPTTP 1221
Score = 35.0 bits (79), Expect = 0.043
Identities = 37/130 (28%), Positives = 46/130 (35%), Gaps = 16/130 (12%)
Query: 51 PPHPQVAEARMATHGHPQA------SLRSSHRPPAHCGAP----ARQCQQQVGTASATLL 100
PP P+ A G P SL+ P H GAP + G A++
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 101 GGPGVPWGTNPKGSAQLGTRRPLGRLLQAGTRPA--RPTPHGRRRLHVSAPLQAQEARGV 158
G P P T P GT P G A T PA P+P G L + P
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKG----APTPPAVTPPSPKGTPTLPATTPSSKGGPTTP 1363
Query: 159 TWRPGPASPA 168
+ + GP PA
Sbjct: 1364 SSKEGPTPPA 1373
Score = 30.4 bits (67), Expect = 1.0
Identities = 36/142 (25%), Positives = 48/142 (33%), Gaps = 26/142 (18%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQC--------------QQQVGTAS 96
PP P+ + A AT AS + PP+ G+PA + G A+
Sbjct: 1016 PPSPKGSPA--ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPAT 1073
Query: 97 ATLLGGPGVPWGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEAR 156
+L G P P T P T P G + P P+P G L +
Sbjct: 1074 PSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP--PSPKG--------GLATPPHK 1123
Query: 157 GVTWRPGPASPAPLRLTTYPPP 178
G P P+P PPP
Sbjct: 1124 GAPTTPAATPPSPKGGLATPPP 1145
>gi|47078278 choline kinase alpha isoform b [Homo sapiens]
Length = 439
Score = 35.4 bits (80), Expect = 0.033
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 122 PLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARG----VTWRPGPASPAPLRLTTYPP 177
PLG LL G+ A P P ++ ++ L++++ G + P P P PL L PP
Sbjct: 15 PLGLLLSCGSGSAAPAPGVGQQRDAASDLESKQLGGQQPPLALPPPPPLPLPLPLPQPPP 74
Query: 178 PFFLSKYPDQSISPRRTRTA 197
P D+ PR R A
Sbjct: 75 P---QPPADEQPEPRTRRRA 91
>gi|47078276 choline kinase alpha isoform a [Homo sapiens]
Length = 457
Score = 35.4 bits (80), Expect = 0.033
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 122 PLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARG----VTWRPGPASPAPLRLTTYPP 177
PLG LL G+ A P P ++ ++ L++++ G + P P P PL L PP
Sbjct: 15 PLGLLLSCGSGSAAPAPGVGQQRDAASDLESKQLGGQQPPLALPPPPPLPLPLPLPQPPP 74
Query: 178 PFFLSKYPDQSISPRRTRTA 197
P D+ PR R A
Sbjct: 75 P---QPPADEQPEPRTRRRA 91
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 35.4 bits (80), Expect = 0.033
Identities = 48/164 (29%), Positives = 64/164 (39%), Gaps = 24/164 (14%)
Query: 54 PQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLG-GPGVPWGTNPK 112
P AR A G P + R++ R G P R + G A+AT PG G+ P
Sbjct: 74 PLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPGR--GRAAATRRSPAPGTARGS-PA 130
Query: 113 GSAQLGTRRPLGRLLQAGTR--PAR--PTPHG-----------RRRLHVSAPLQAQEARG 157
G + G AGTR PAR P P G RR + P +R
Sbjct: 131 GVERAGGATAAS---SAGTRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRR 187
Query: 158 VTWRPGPASPAPLRLTTYPPPFFLSKYP--DQSISPRRTRTAGS 199
PGP +P P T+P F ++ P S++P AG+
Sbjct: 188 WAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGA 231
Score = 27.7 bits (60), Expect = 6.8
Identities = 30/118 (25%), Positives = 37/118 (31%), Gaps = 14/118 (11%)
Query: 69 ASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKGSAQLGTR-------- 120
A R H PP A + Q+ G WG + S G R
Sbjct: 46 AGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPC 105
Query: 121 RPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPLRLTTYPPP 178
R GR A TR + P P R +P + A G T A + PPP
Sbjct: 106 RAPGRGRAAATRRS-PAPGTAR----GSPAGVERAGGAT-AASSAGTRSVPARRLPPP 157
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 35.4 bits (80), Expect = 0.033
Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 28/131 (21%)
Query: 52 PHPQVAEARMATH-----GHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGP--G 104
PHP +++ ++A H GHP A PP G P + + +G P G
Sbjct: 302 PHPGMSQMQLAHHGPHGLGHPHAG------PPGSGGQPPPRPPPGMPHPGPPPMGMPPRG 355
Query: 105 VPWGT---NPKGSAQLGTRRPLGRLLQAG-TRPARPTPHGRRRLHVSAPLQAQEARGVTW 160
P+G+ +P G R P + G T P RP P+G +R + P
Sbjct: 356 PPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPP----------- 404
Query: 161 RPGPASPAPLR 171
RP P P P R
Sbjct: 405 RPTPRPPVPPR 415
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 35.0 bits (79), Expect = 0.043
Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
Query: 53 HPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTA-SATLLGGPGV---PWG 108
HPQ ++ +T GHP + P + G PA C + G+A P V P G
Sbjct: 7000 HPQGSKQLPSTGGHPGTAQPERPSPDSPWGQPAPFCHPKQGSAPQEGCSPHPAVAPCPPG 7059
Query: 109 TNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPA 168
+ P GS + P L G A P P S PL ++ G PG P
Sbjct: 7060 SFPPGSCKEAPLVPSSPFL--GQPQAPPAP-----AKASPPLDSKMGPGDISLPGRPKPG 7112
Query: 169 P 169
P
Sbjct: 7113 P 7113
>gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 35.0 bits (79), Expect = 0.043
Identities = 42/150 (28%), Positives = 58/150 (38%), Gaps = 35/150 (23%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRPPAHC---GAPA---------RQCQQQVGTASAT 98
P P V A ++ QA+ RSS +P + GAP+ R C + TA+ +
Sbjct: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVS 102
Query: 99 LLGGPGVPWGTNPKGSAQLGTRRPLGRLLQAGTRPA----------RPTPHGRRRLHVSA 148
P+ + +R PL R L R RPTP G R ++A
Sbjct: 103 ----------RGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAA 152
Query: 149 PLQAQEARGVTWRPGPASPAPLRLTTYPPP 178
P AR + R GP+ PAP PP
Sbjct: 153 P-PGNCAR--SRREGPSRPAPTGAAPLAPP 179
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 35.0 bits (79), Expect = 0.043
Identities = 44/163 (26%), Positives = 56/163 (34%), Gaps = 33/163 (20%)
Query: 49 LLPPHPQVAEARMATHGHP------------QASLRSSHRPPAH--CGAP--------AR 86
L PPH QV+ ++ +G P Q S SH P+ GAP
Sbjct: 549 LPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVT 608
Query: 87 QCQQQVGTASATLLGGPGVPWGTNPKGSAQLGTRRPLGRLLQAGT----RPARP------ 136
+ T AT+ P +P G G R P + T +P P
Sbjct: 609 TSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTG 668
Query: 137 TPHGRRRLHVSAPLQAQEARGVTWRPGPASPA-PLRLTTYPPP 178
TP G R A + T PGP PA P L + PPP
Sbjct: 669 TPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPP 711
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 35.0 bits (79), Expect = 0.043
Identities = 44/163 (26%), Positives = 56/163 (34%), Gaps = 33/163 (20%)
Query: 49 LLPPHPQVAEARMATHGHP------------QASLRSSHRPPAH--CGAP--------AR 86
L PPH QV+ ++ +G P Q S SH P+ GAP
Sbjct: 549 LPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVT 608
Query: 87 QCQQQVGTASATLLGGPGVPWGTNPKGSAQLGTRRPLGRLLQAGT----RPARP------ 136
+ T AT+ P +P G G R P + T +P P
Sbjct: 609 TSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTG 668
Query: 137 TPHGRRRLHVSAPLQAQEARGVTWRPGPASPA-PLRLTTYPPP 178
TP G R A + T PGP PA P L + PPP
Sbjct: 669 TPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPP 711
>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
Length = 1030
Score = 35.0 bits (79), Expect = 0.043
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 17/114 (14%)
Query: 52 PHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNP 111
P P++ A P +SL+ PP HCG P +Q +G A A L T
Sbjct: 770 PPPELPPPEAAPPVLPASSLQ----PPCHCGKPLQQELHSLGAALAEKLD----RLATAL 821
Query: 112 KGSAQ-LGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGP 164
G AQ + T R ++ + G RP P P G+ + P RG W GP
Sbjct: 822 AGLAQEVATMRT--QVNRLGRRPQGPGPMGQASWMWTLP------RGPRWAHGP 867
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 34.3 bits (77), Expect = 0.073
Identities = 33/111 (29%), Positives = 39/111 (35%), Gaps = 21/111 (18%)
Query: 51 PPHPQVAEARMATHGH---------------PQASLRSSHRPPAHCGAPARQCQQQVGTA 95
PPHP E G+ P SHRPP G P R Q G
Sbjct: 93 PPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERP-PPQGGNQ 151
Query: 96 SATLLGGPGVPWGTNPKG-----SAQLGTRRPLGRLLQAGTRPARPTPHGR 141
S PG P G P+ SA+ +P G Q G +P P P G+
Sbjct: 152 SQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGK 202
Score = 30.0 bits (66), Expect = 1.4
Identities = 35/120 (29%), Positives = 41/120 (34%), Gaps = 25/120 (20%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTN 110
PP P E G P S PP H G P R Q G S PG P
Sbjct: 72 PPPPGKPE------GRPPQGGNQSQGPPPHPGKPERP-PPQGGNQSQGTPPPPGKPERPP 124
Query: 111 PKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPG-PASPAP 169
P+G Q + RP +P RP P G +++G PG P P P
Sbjct: 125 PQGGNQ--SHRP----PPPPGKPERPPPQG-----------GNQSQGPPPHPGKPEGPPP 167
>gi|239752706 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 33.9 bits (76), Expect = 0.095
Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 5/141 (3%)
Query: 41 RFSSKAHCLLPPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLL 100
R +++A L PHP MA PQ RS C + S +
Sbjct: 31 RGTARARPPLRPHPAPRPREMAAAA-PQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPP 89
Query: 101 GGPGVPWGTNPKGSAQLGTRRPLGRLLQAG---TRPARPTPHGRRRLHVSAPLQAQEARG 157
PG+P P G+ G R+ G ++A T+P P G +A G
Sbjct: 90 RRPGLPTPPRP-GATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPG 148
Query: 158 VTWRPGPASPAPLRLTTYPPP 178
RPG + +P R + PP
Sbjct: 149 TPLRPGVTTVSPTRSVSVRPP 169
Score = 33.5 bits (75), Expect = 0.12
Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Query: 104 GVPWGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGR-RRLHVSAPLQAQEA------- 155
G WG P+ Q G P R P RP P R R + +AP +
Sbjct: 10 GRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLL 69
Query: 156 RGVTWRPGPASPAPLRLTTYPPP 178
VT P P PAPL T++ PP
Sbjct: 70 NAVT--PSPC-PAPLAPTSFSPP 89
>gi|239747242 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 33.9 bits (76), Expect = 0.095
Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 5/141 (3%)
Query: 41 RFSSKAHCLLPPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLL 100
R +++A L PHP MA PQ RS C + S +
Sbjct: 31 RGTARARPPLRPHPAPRPREMAAAA-PQNGSRSVAEKHLLNAVTPSPCPAPLAPTSFSPP 89
Query: 101 GGPGVPWGTNPKGSAQLGTRRPLGRLLQAG---TRPARPTPHGRRRLHVSAPLQAQEARG 157
PG+P P G+ G R+ G ++A T+P P G +A G
Sbjct: 90 RRPGLPTPPRP-GATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPG 148
Query: 158 VTWRPGPASPAPLRLTTYPPP 178
RPG + +P R + PP
Sbjct: 149 TPLRPGVTTVSPTRSVSVRPP 169
Score = 33.5 bits (75), Expect = 0.12
Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Query: 104 GVPWGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGR-RRLHVSAPLQAQEA------- 155
G WG P+ Q G P R P RP P R R + +AP +
Sbjct: 10 GRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPREMAAAAPQNGSRSVAEKHLL 69
Query: 156 RGVTWRPGPASPAPLRLTTYPPP 178
VT P P PAPL T++ PP
Sbjct: 70 NAVT--PSPC-PAPLAPTSFSPP 89
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 33.9 bits (76), Expect = 0.095
Identities = 36/120 (30%), Positives = 41/120 (34%), Gaps = 8/120 (6%)
Query: 54 PQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKG 113
P+ E R A G + S A PA + G A G P G P+
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQR 104
Query: 114 SAQLGTRRPLGRLLQAGTRP----ARPTPHGRRRLHVSAPLQAQEARGVTWRP-GPASPA 168
RRP L+ AG P RP P G P A A G P GPA PA
Sbjct: 105 PGPPSPRRP---LVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPA 161
Score = 27.7 bits (60), Expect = 6.8
Identities = 37/132 (28%), Positives = 42/132 (31%), Gaps = 42/132 (31%)
Query: 47 HCLLPPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVP 106
H L P P+V A G+ S G+PA G A A GP P
Sbjct: 41 HHLAPRTPEVRAAAAGALGNHVVS-----------GSPA-------GAAGA----GPAAP 78
Query: 107 WGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPAS 166
P + + P GR G P RP P RR V PA
Sbjct: 79 AEGAPGAAPE---PPPAGRARPGGGGPQRPGPPSPRRPLV-----------------PAG 118
Query: 167 PAPLRLTTYPPP 178
PAP PPP
Sbjct: 119 PAPPAAKLRPPP 130
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 33.9 bits (76), Expect = 0.095
Identities = 37/126 (29%), Positives = 43/126 (34%), Gaps = 6/126 (4%)
Query: 54 PQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKG 113
P+ E G P +RS PP C AP + ASA PG+ P
Sbjct: 114 PRRGEEEEGGGGFPHFGVRSC-APPGRCPAPPHPRESTTSFASAPPRPAPGLEPQRGPAA 172
Query: 114 S-AQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPLRL 172
S Q + RP T PA P R L P Q E G P +PA
Sbjct: 173 SPPQEPSSRPPSPPAGLSTEPAGPGTAPRPFL----PGQPAEVDGNPPPAAPEAPAASPS 228
Query: 173 TTYPPP 178
T P P
Sbjct: 229 TASPAP 234
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 33.9 bits (76), Expect = 0.095
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 100 LGGPGVPWGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVT 159
+G G+P T PKG A G+R P+G ++ P P R V P + RG
Sbjct: 198 VGAWGLPGPTGPKGDA--GSRGPMG--MRGPPGPQGPPGSPGRAGAVGTPGE----RGPP 249
Query: 160 WRPGPASPAPLRLTTYPPPFFLSKYPDQSISPRRTRT 196
PGP P PP +S++ D +S T T
Sbjct: 250 GPPGPPGPPGPPAPVGPPHARISQHGDPLLSNTFTET 286
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 33.5 bits (75), Expect = 0.12
Identities = 43/157 (27%), Positives = 59/157 (37%), Gaps = 11/157 (7%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTN 110
PP A AT G PQA+ RS + AR S++ G G
Sbjct: 4 PPATAATAAGGATGGGPQAARRSGVQGGQRNSTSARAPPPPPLAPSSSSSSGSSGSSGGG 63
Query: 111 PKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTW------RPGP 164
GSA T LG +L G+ R + R +A L+A+E +PGP
Sbjct: 64 GSGSAGQPT---LGSMLAVGSAARRASERAGGRAGGTA-LRAREPPPPLLPPPSPPQPGP 119
Query: 165 ASPAPLRLTTYPPPFF-LSKYPDQSISPRRTRTAGSD 200
PA R P P + +P + S R+ R G +
Sbjct: 120 KGPASPRPLPSPLPLLETTPFPPDTPSRRQDRRGGGE 156
>gi|239741063 PREDICTED: hypothetical protein XP_002342081 [Homo
sapiens]
Length = 170
Score = 33.5 bits (75), Expect = 0.12
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 104 GVPWGTNPKGSAQLGTRRPLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWR-- 161
G WG P+ Q G P R P RP P R R ++A +R V +
Sbjct: 10 GRDWGLEPRSEEQSGRVSPPPRGTARARPPLRPHPAPRPR-EMAAAAPQNGSRSVAEKHL 68
Query: 162 -----PGPASPAPLRLTTYPPP 178
P P PAPL T++ PP
Sbjct: 69 LNPVTPSPC-PAPLAPTSFSPP 89
Score = 33.1 bits (74), Expect = 0.16
Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 5/141 (3%)
Query: 41 RFSSKAHCLLPPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLL 100
R +++A L PHP MA PQ RS C + S +
Sbjct: 31 RGTARARPPLRPHPAPRPREMAAAA-PQNGSRSVAEKHLLNPVTPSPCPAPLAPTSFSPP 89
Query: 101 GGPGVPWGTNPKGSAQLGTRRPLGRLLQAG---TRPARPTPHGRRRLHVSAPLQAQEARG 157
PG+P P G+ G R+ G ++A T+P P G +A G
Sbjct: 90 RRPGLPTPPRP-GATGSGARQQRGAFVRAHATFTQPHGPLSGGLFLKGATAGRNGAPPPG 148
Query: 158 VTWRPGPASPAPLRLTTYPPP 178
RPG + +P R + PP
Sbjct: 149 TPLRPGVTTVSPTRSVSVRPP 169
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 33.5 bits (75), Expect = 0.12
Identities = 42/148 (28%), Positives = 53/148 (35%), Gaps = 29/148 (19%)
Query: 73 SSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKGS----AQLG----TRR--- 121
S+ + PA AP Q Q G S + GGPG P P S Q G TR+
Sbjct: 513 SAPQQPASQAAPPTQGQ---GRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV 569
Query: 122 -----------PLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPL 170
P G + G P P G R A + T +P P+ P P
Sbjct: 570 SGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGP- 628
Query: 171 RLTTYPPPFFLSKYPDQSISPRRTRTAG 198
P P L++ P Q + P T AG
Sbjct: 629 --AGRPKP-QLAQKPSQDVPPPATAAAG 653
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 33.5 bits (75), Expect = 0.12
Identities = 42/148 (28%), Positives = 53/148 (35%), Gaps = 29/148 (19%)
Query: 73 SSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNPKGS----AQLG----TRR--- 121
S+ + PA AP Q Q G S + GGPG P P S Q G TR+
Sbjct: 513 SAPQQPASQAAPPTQGQ---GRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV 569
Query: 122 -----------PLGRLLQAGTRPARPTPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPL 170
P G + G P P G R A + T +P P+ P P
Sbjct: 570 SGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGP- 628
Query: 171 RLTTYPPPFFLSKYPDQSISPRRTRTAG 198
P P L++ P Q + P T AG
Sbjct: 629 --AGRPKP-QLAQKPSQDVPPPATAAAG 653
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 33.5 bits (75), Expect = 0.12
Identities = 43/159 (27%), Positives = 48/159 (30%), Gaps = 29/159 (18%)
Query: 51 PPHPQVAEARMATHGHPQASLRSSHRPPAHCGAPARQCQQQVGTASATLLGGPGVPWGTN 110
PP P E G P S PP H G P Q G S PG P G
Sbjct: 156 PPRPGKPE------GPPPQGGNQSQGPPPHPGKPEGP-PPQGGNQSQGPPPRPGKPEGPP 208
Query: 111 PKGSAQLG-----TRRPLGRLLQAGTRPARPTPH-----------GRRRLHVSAPLQAQE 154
P+G Q +P G Q G +P P PH G + P + Q
Sbjct: 209 PQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQG 268
Query: 155 ARGVTWRPGPASPAPLRLTTYPPPFFLSKYPDQSISPRR 193
P P P PPP P Q P R
Sbjct: 269 PPPPGGNPQQPLPPPAGKPQGPPP------PPQGGRPHR 301
>gi|116174748 developing brain homeobox 2 [Homo sapiens]
Length = 339
Score = 33.5 bits (75), Expect = 0.12
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 18/82 (21%)
Query: 95 ASATLLGGPGVPWGTNPKGSAQLGTRRPLGRLLQAGTRPAR----PTPHGRRRLHVSAPL 150
AS+ LL P P G LG + LL+ G P P PH P
Sbjct: 18 ASSALLNLPAAP------GFGNLGKSFLIENLLRVGGAPTPRLQPPAPHD--------PA 63
Query: 151 QAQEARGVTWRPGPASPAPLRL 172
A G RP PASP PL+L
Sbjct: 64 TALATAGAQLRPLPASPVPLKL 85
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 33.5 bits (75), Expect = 0.12
Identities = 43/155 (27%), Positives = 50/155 (32%), Gaps = 32/155 (20%)
Query: 77 PPAHCGAPARQCQQQVGTASATLLGGPGVPWGTNP----------KGSAQLGTRRPLGRL 126
PP+ AP +G A L PG P G P + G R PL RL
Sbjct: 398 PPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRL 457
Query: 127 LQAGTRPAR---------------PTPHG-RRRLHVSAPLQAQEARGVTWRP------GP 164
L G P R P P G RL AP R RP GP
Sbjct: 458 LPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGP 517
Query: 165 ASPAPLRLTTYPPPFFLSKYPDQSISPRRTRTAGS 199
A P P P LS P+ P+ T+ +
Sbjct: 518 APPGLFPPAPLPNPGVLSAPPNLIQRPKADDTSAA 552
>gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]
Length = 254
Score = 33.1 bits (74), Expect = 0.16
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 15/63 (23%)
Query: 132 RPARPTPHGRRRLHV--SAPLQAQEARGVTWRPGPASPAPLRLTTYPPPFFLSKYPDQSI 189
RPARP P HV +AP A+E P P +PAP L PP +P++ +
Sbjct: 37 RPARPPPASSHESHVLDNAPAAARE-------PPPPAPAPRCLRLRPP------FPEEGV 83
Query: 190 SPR 192
+ R
Sbjct: 84 AAR 86
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 33.1 bits (74), Expect = 0.16
Identities = 45/176 (25%), Positives = 63/176 (35%), Gaps = 19/176 (10%)
Query: 25 PILHAVSRRRARQFLLRFSSKAHCLLPPHPQVAEARMATHGHPQ--ASLRSSHRPPAHCG 82
P + + R R LRF + P P + ++HG P+ + S PP G
Sbjct: 262 PDVGSAPSRSLRGCSLRFRNT------PPPIPGSDQPSSHGRPRFRETGDSEDCPPFRAG 315
Query: 83 APARQCQQQVGTASATLLGGPGVPWGTNPKGSAQLG------TRRPLGRLLQAGTRPARP 136
P +Q TA ++ GP GT P+ +A L +RP RP
Sbjct: 316 TPPQQ-----PTAPSSEWPGPQRSPGTGPRWTAPLPRPAPLPAKRPGDSPASKRPRPGGV 370
Query: 137 TPHGRRRLHVSAPLQAQEARGVTWRPGPASPAPLRLTTYPPPFFLSKYPDQSISPR 192
+P R PL + EA G T P L K P + +SPR
Sbjct: 371 SPEARDPPKGENPLCSSEAAGETGPTQVRGPDALGGGRLQGKGREGKAPGEGVSPR 426
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,175,919
Number of Sequences: 37866
Number of extensions: 615145
Number of successful extensions: 2874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 2685
Number of HSP's gapped (non-prelim): 428
length of query: 200
length of database: 18,247,518
effective HSP length: 97
effective length of query: 103
effective length of database: 14,574,516
effective search space: 1501175148
effective search space used: 1501175148
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.