CHKA 30396

Name: CHKA	Sequence: fasta or formatted (457aa)		NCBI GI: 47078276
Description: choline kinase alpha isoform a		Referenced in: Acetylcholine Lipid Metabolism
Other entries for this name: alt prot [439aa] choline kinase alpha isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 28 2 C cysteine 1.8 8 1 D aspartate 3.3 15 1 E glutamate 9.4 43 2 F phenylalanine 5.7 26 2 G glycine 6.3 29 2 H histidine 1.8 8 1 I isoleucine 4.4 20 2 K lysine 6.3 29 2 L leucine 12.5 57 3 M methionine 2.8 13 1 N asparagine 3.3 15 1 P proline 8.3 38 5 Q glutamine 5.0 23 2 R arginine 5.5 25 3 S serine 7.2 33 2 T threonine 2.8 13 2 V valine 2.4 11 2 W tryptophan 1.3 6 1 Y tyrosine 3.7 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 choline kinase alpha isoform a CHKA 0.948 choline kinase alpha isoform b CHKB 0.459 choline kinase beta ETNK1 0.139 ethanolamine kinase 1 isoform A ETNK2 0.117 ethanolamine kinase 2 TRIM66 0.025 tripartite motif-containing 66 HTT 0.025 huntingtin FMN1 0.024 formin 1 ZNF462 0.024 zinc finger protein 462 MYST3 0.024 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.024 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.024 MYST histone acetyltransferase (monocytic leukemia)... PRDM2 0.024 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.024 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.024 retinoblastoma protein-binding zinc finger protein i... FMNL1 0.024 formin-like 1 FMNL2 0.023 formin-like 2 PCLO 0.023 piccolo isoform 2 PCLO 0.023 piccolo isoform 1 SETD1B 0.023 SET domain containing 1B KDM6B 0.023 lysine (K)-specific demethylase 6B MLL4 0.023 myeloid/lymphoid or mixed-lineage leukemia 4 PRR12 0.023 proline rich 12 WAS 0.022 Wiskott-Aldrich syndrome protein FOXC1 0.022 forkhead box C1 RAPH1 0.022 Ras association and pleckstrin homology domains 1 is... KCNA5 0.021 potassium voltage-gated channel, shaker-related subf... USP51 0.021 ubiquitin specific protease 51 FLJ20021 0.021 PREDICTED: hypothetical protein FLJ20021 0.021 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.