BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169171179 PREDICTED: hypothetical protein [Homo sapiens] (179 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169171841 PREDICTED: hypothetical protein [Homo sapiens] 366 e-102 gi|169171179 PREDICTED: hypothetical protein [Homo sapiens] 366 e-102 gi|239508946 PREDICTED: hypothetical protein [Homo sapiens] 366 e-102 gi|169171680 PREDICTED: hypothetical protein [Homo sapiens] 343 6e-95 gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 30 1.1 gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 30 1.4 gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 29 2.5 gi|239745060 PREDICTED: similar to breast cancer anti-estrogen r... 29 2.5 gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens] 29 2.5 gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens] 29 2.5 gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ... 29 2.5 gi|116063562 FERM domain containing 4A [Homo sapiens] 29 2.5 gi|239754342 PREDICTED: hypothetical protein [Homo sapiens] 28 4.2 gi|14277685 protocadherin gamma subfamily C, 5 isoform 2 precurs... 28 4.2 gi|11128023 protocadherin gamma subfamily C, 5 isoform 1 precurs... 28 4.2 gi|22749325 zinc finger protein 48 [Homo sapiens] 28 4.2 gi|122937420 plasma kallikrein-like protein 4 [Homo sapiens] 28 4.2 gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 28 4.2 gi|38176300 nestin [Homo sapiens] 28 5.5 gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] 28 5.5 gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] 28 5.5 gi|124001558 ubiquitin specific peptidase 54 [Homo sapiens] 28 5.5 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 28 5.5 gi|239754854 PREDICTED: hypothetical protein [Homo sapiens] 27 7.2 gi|239749393 PREDICTED: hypothetical protein [Homo sapiens] 27 7.2 gi|239743528 PREDICTED: hypothetical protein XP_002342882 [Homo ... 27 7.2 gi|197276670 spermatogenesis and centriole associated 1 isoform ... 27 7.2 gi|197276668 spermatogenesis and centriole associated 1 isoform ... 27 7.2 gi|39777614 SS18-like protein 1 [Homo sapiens] 27 7.2 gi|41281808 harmonin isoform b3 [Homo sapiens] 27 9.4 >gi|169171841 PREDICTED: hypothetical protein [Homo sapiens] Length = 179 Score = 366 bits (940), Expect = e-102 Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN Sbjct: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 Query: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG 120 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG Sbjct: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG 120 Query: 121 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 179 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ Sbjct: 121 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 179 >gi|169171179 PREDICTED: hypothetical protein [Homo sapiens] Length = 179 Score = 366 bits (940), Expect = e-102 Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN Sbjct: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 Query: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG 120 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG Sbjct: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG 120 Query: 121 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 179 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ Sbjct: 121 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 179 >gi|239508946 PREDICTED: hypothetical protein [Homo sapiens] Length = 179 Score = 366 bits (940), Expect = e-102 Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN Sbjct: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 Query: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG 120 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG Sbjct: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVG 120 Query: 121 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 179 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ Sbjct: 121 SPHVSAASRSSPPLAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 179 >gi|169171680 PREDICTED: hypothetical protein [Homo sapiens] Length = 226 Score = 343 bits (879), Expect = 6e-95 Identities = 178/226 (78%), Positives = 179/226 (79%), Gaps = 47/226 (20%) Query: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN Sbjct: 1 MRLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSN 60 Query: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFL---------------------------- 92 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFL Sbjct: 61 ILNYKSKLGNYSKRASSRGSKPGHWPAACTFLFRKGLTKADSKETQVPPPPATLHLPHPQ 120 Query: 93 -------------------SHPPERTAPHLRGPVASGLPRGLRVSVGSPHVSAASRSSPP 133 +HPPERTAPHLRGPVASGLPRGLRVSVGSPHVSAASRSSPP Sbjct: 121 FCLGPRPIPQISPGTPHPAAHPPERTAPHLRGPVASGLPRGLRVSVGSPHVSAASRSSPP 180 Query: 134 LAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 179 LAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ Sbjct: 181 LAGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATPRRFQ 226 >gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo sapiens] Length = 278 Score = 30.0 bits (66), Expect = 1.1 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Query: 77 SRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVGSPHVSAASRSSPPLAG 136 SR S P P A + HP RGP A G GS +++SP G Sbjct: 139 SRSSGP---PRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPG 195 Query: 137 FCFHLLISQSTASYLAYEGLDLRKPSWITAAR 168 F L AS A+ R +W TA + Sbjct: 196 FPPCLRSPPCPASSRAFRSCLSRAKAWDTAGQ 227 >gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] Length = 2639 Score = 29.6 bits (65), Expect = 1.4 Identities = 14/47 (29%), Positives = 24/47 (51%) Query: 66 SKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLP 112 S + +S++ S G +PG+W A + +S +T P + SG P Sbjct: 266 STVAEFSRQCSHAGGRPGNWRTATSAVSPGASKTCPGNLVYLESGSP 312 >gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] Length = 2382 Score = 28.9 bits (63), Expect = 2.5 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 10/87 (11%) Query: 46 RGPGLLTAGRVFNSNILNYKSKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRG 105 +G + T RV + ++Y G+ ++A S G+ PGH P+ S P P Sbjct: 659 QGSSVFTESRVSSQQTVSY----GSQHEQAHSTGTVPGHIPSTVQAQSQPHGVYPP---S 711 Query: 106 PVASGLPRGLRVSVGSPHVSAASRSSP 132 VA G +G S ++ S S P Sbjct: 712 SVAQGQSQG---QPSSSSLTGVSSSQP 735 >gi|239745060 PREDICTED: similar to breast cancer anti-estrogen resistance 1 [Homo sapiens] Length = 353 Score = 28.9 bits (63), Expect = 2.5 Identities = 34/125 (27%), Positives = 42/125 (33%), Gaps = 14/125 (11%) Query: 12 RVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSNILNYKSKLGNY 71 +V +S TR G + CA +P C L P L L Y S Sbjct: 193 QVPSSMDTRSWEGTKPPAKCASVSSPRCLPPRGLGSPSFL----------LIYLSPAPAR 242 Query: 72 SK--RASSRGSKPGHWPAACTFLSHPPERTAPHLRG--PVASGLPRGLRVSVGSPHVSAA 127 + RA + HW T P TAP R P R LR+ V V+ Sbjct: 243 GEPCRALTGHLSQRHWAPQVTEQVQPSLSTAPGDRAVFPQLCSSGRTLRIHVEKEAVTTP 302 Query: 128 SRSSP 132 SSP Sbjct: 303 EASSP 307 >gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens] Length = 1290 Score = 28.9 bits (63), Expect = 2.5 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 70 NYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRG 114 +Y+ R +RG K + SHPP+ PH+ PV +P G Sbjct: 924 SYATRRQTRGQKENGLSETTSKDSHPPDLGPPHI--PVPPSIPVG 966 >gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens] Length = 1291 Score = 28.9 bits (63), Expect = 2.5 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 70 NYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRG 114 +Y+ R +RG K + SHPP+ PH+ PV +P G Sbjct: 924 SYATRRQTRGQKENGLSETTSKDSHPPDLGPPHI--PVPPSIPVG 966 >gi|33695078 protein phosphatase 2, regulatory subunit B'', beta isoform 1 [Homo sapiens] Length = 575 Score = 28.9 bits (63), Expect = 2.5 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 79 GSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSV-GSPHVSAASRSS 131 G +PG WP A P P GP LP G S +PHV RS+ Sbjct: 52 GEQPGAWPTAPLAAPRPSGLEPPGTPGP-GPALPLGAASSPRNAPHVRGTRRSA 104 >gi|116063562 FERM domain containing 4A [Homo sapiens] Length = 1039 Score = 28.9 bits (63), Expect = 2.5 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 66 SKLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVGSPHVS 125 S+L + S +S GS+ + TF++H P + ++ LP+ R S S + Sbjct: 943 SRLSHTSSTSSDSGSQYST-SSQSTFVAHSRVTRMPQMCKATSAALPQSQRSSTPSSEIG 1001 Query: 126 AASRSSP 132 A SSP Sbjct: 1002 ATPPSSP 1008 >gi|239754342 PREDICTED: hypothetical protein [Homo sapiens] Length = 235 Score = 28.1 bits (61), Expect = 4.2 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 20/119 (16%) Query: 18 ATRGHTGDRD------SRVCA---HADAPICTRTGALRGPGLLTAGRVFNSNILNYKSKL 68 A RG +R+ SRVCA A +P+ R G R PG G + + + Sbjct: 8 AQRGGRRERERDSKALSRVCAPARSARSPLGARAGGARVPGARPRGGLPRARVRARPGCR 67 Query: 69 GNY----------SKRASSRGSKPG-HWPAACTFLSHPPERTAPHLRGPVASGLPRGLR 116 + +R SRG+ W +AC ER RG G+P G R Sbjct: 68 APFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEGVPAGGR 126 >gi|14277685 protocadherin gamma subfamily C, 5 isoform 2 precursor [Homo sapiens] Length = 878 Score = 28.1 bits (61), Expect = 4.2 Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 13/111 (11%) Query: 2 RLSRSLPS---TTRVATSTATRGHTGDRDSRVCAHADAP----ICTRTGALRGPGLLTAG 54 RL RS P T+V A GH + + AP + T TG +R L Sbjct: 578 RLPRSAPPGSLVTKVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLED 637 Query: 55 RVFNSNILNYKSKLGNYSKRASS------RGSKPGHWPAACTFLSHPPERT 99 ++ G+ S +++ P P + FL HPPER+ Sbjct: 638 DSDTQQVVVLVRDNGDPSLSSTATVLLVLEDEDPEEMPKSSDFLIHPPERS 688 >gi|11128023 protocadherin gamma subfamily C, 5 isoform 1 precursor [Homo sapiens] Length = 944 Score = 28.1 bits (61), Expect = 4.2 Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 13/111 (11%) Query: 2 RLSRSLPS---TTRVATSTATRGHTGDRDSRVCAHADAP----ICTRTGALRGPGLLTAG 54 RL RS P T+V A GH + + AP + T TG +R L Sbjct: 578 RLPRSAPPGSLVTKVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLED 637 Query: 55 RVFNSNILNYKSKLGNYSKRASS------RGSKPGHWPAACTFLSHPPERT 99 ++ G+ S +++ P P + FL HPPER+ Sbjct: 638 DSDTQQVVVLVRDNGDPSLSSTATVLLVLEDEDPEEMPKSSDFLIHPPERS 688 >gi|22749325 zinc finger protein 48 [Homo sapiens] Length = 618 Score = 28.1 bits (61), Expect = 4.2 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 80 SKPGH-WPAACTFLSHPPERTAPHL--RGPVASGLPRGLRVSVGSPHVSAASRSSPPLAG 136 S PG+ PA PP T+P L R P SG P GL P A PPLAG Sbjct: 388 SFPGYPLPALIPSPPPPPLGTSPPLTPRSPSHSGEPFGLPGLEPEPGGPQAGEPPPPLAG 447 >gi|122937420 plasma kallikrein-like protein 4 [Homo sapiens] Length = 395 Score = 28.1 bits (61), Expect = 4.2 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 9 STTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSNILNYKSKL 68 S T+ T TA G G +C + G L G G + + +Y + Sbjct: 207 SHTKEETKTACLGDPGS--PMMCQLQQFDLWVLRGVLNFGGETCPGLFLYTKVEDYSKWI 264 Query: 69 GNYSKRASSRGSKPGHWPAACTFLSHPPERT 99 + ++RA S HW +F H P T Sbjct: 265 TSKAERAGPPLSSLHHWEKLISFSHHGPNAT 295 >gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] Length = 818 Score = 28.1 bits (61), Expect = 4.2 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 79 GSKPGHWPAACTFLSHPPERTAPHLRGPVASGL-PRGLRVSVGSPHVSAASRSSPP 133 G++PG P A S PP +PH V+ L P +V G P A + P Sbjct: 619 GAQPGAQPGASPSPSQPPADQSPHTLRKVSKKLAPIPPKVPFGQPGAMADQSAGQP 674 >gi|38176300 nestin [Homo sapiens] Length = 1621 Score = 27.7 bits (60), Expect = 5.5 Identities = 14/36 (38%), Positives = 18/36 (50%) Query: 97 ERTAPHLRGPVASGLPRGLRVSVGSPHVSAASRSSP 132 E + H+ G V +GL + V G P VS R SP Sbjct: 1543 EGKSQHVNGGVMNGLEQSEEVGQGMPLVSEGDRGSP 1578 >gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] Length = 326 Score = 27.7 bits (60), Expect = 5.5 Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 18/101 (17%) Query: 89 CTFLSHPPERTA-----PHLRGPVA-SGLPRGLRVS-----VGSPHVSAAS---RSSPPL 134 C F+ +P E A P LR ++ SGLP G R S + P +S++S SSPP Sbjct: 162 CHFIHNPSEDLAAPGHPPVLRQSISFSGLPSGRRTSPPPPGLAGPSLSSSSFSPSSSPPP 221 Query: 135 AGFCFHLLISQSTASYLAYEGLDLRKPSWITAARKRKNATP 175 G L +S S S L R P+ + R+ ATP Sbjct: 222 PG---DLPLSPSAFSAAPGTPLARRDPTPVCCPSCRR-ATP 258 >gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] Length = 1123 Score = 27.7 bits (60), Expect = 5.5 Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 13/168 (7%) Query: 2 RLSRSLPSTTRVATSTATRGHTGDRDSRVCAHADAPICTRTGALRGPGLLTAGRVFNSNI 61 R ++ LP T+ +S + G DSR + +P T G GL G ++ + Sbjct: 548 RTAQGLPGTSNSNSSRSGSQRQGSWDSRDVVLSTSPKLLATATANGHGL--KGNDESAGL 605 Query: 62 LNYKSKLGNYSKRASSRGSKPGHWP-AACTFLSHPPE---RTAPHLRGPVASGLPRGLRV 117 S + ASS +K P + L E TA H + P + + +++ Sbjct: 606 DRRGSSSSSPEHSASSDSTKAPQTPRSGAAHLCDSQETNCSTAGHSKTPPSGADSKTVKL 665 Query: 118 S---VGSPHVSAASRSSPPLAGFCFHLLISQSTASYL-AYEGLDLRKP 161 + + AS SPP A L +S AS L G DLR P Sbjct: 666 KSPVLSNTTTEPASTMSPPPAK---KLALSAKKASTLWRATGNDLRPP 710 >gi|124001558 ubiquitin specific peptidase 54 [Homo sapiens] Length = 1684 Score = 27.7 bits (60), Expect = 5.5 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 72 SKRASSRGSKPGHWPAACTFLSHPP-------ERTAPHLRGPVASGLPRGLRVSVGSPHV 124 SK S+G + GHWP A S E + H + SGLP G S G P + Sbjct: 1168 SKPPFSQGQEKGHWPWAKQQSSLEGGDRPLSWEESTEHSSLALNSGLPNGETSSGGQPRL 1227 Query: 125 S 125 + Sbjct: 1228 A 1228 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 27.7 bits (60), Expect = 5.5 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Query: 86 PAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVGSPHVSAASRSSPPLAG 136 PAA + PP P PVA+ P +P +AA+ ++PP G Sbjct: 119 PAAAAAAAPPPTPAPPPPPAPVAAAAP------ARAPRAAAAAATAPPSPG 163 >gi|239754854 PREDICTED: hypothetical protein [Homo sapiens] Length = 208 Score = 27.3 bits (59), Expect = 7.2 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 13/74 (17%) Query: 68 LGNYSKRASSRGSK----PGHWPAACTFLSHPP--ERTA------PHLRGPVASGLPRGL 115 L N+S+ A S + P H P +C S+PP ++ A P LRG V PR Sbjct: 87 LQNWSRAAPSETLQLPLAPTHTPGSCRCNSNPPGFQKVARCASFGPELRGGV-KDTPRRF 145 Query: 116 RVSVGSPHVSAASR 129 V SP A R Sbjct: 146 AVPPPSPRTPGARR 159 >gi|239749393 PREDICTED: hypothetical protein [Homo sapiens] Length = 208 Score = 27.3 bits (59), Expect = 7.2 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 13/74 (17%) Query: 68 LGNYSKRASSRGSK----PGHWPAACTFLSHPP--ERTA------PHLRGPVASGLPRGL 115 L N+S+ A S + P H P +C S+PP ++ A P LRG V PR Sbjct: 87 LQNWSRAAPSETLQLPLAPTHTPGSCRCNSNPPGFQKVARCASFGPELRGGV-KDTPRRF 145 Query: 116 RVSVGSPHVSAASR 129 V SP A R Sbjct: 146 AVPPPSPRTPGARR 159 >gi|239743528 PREDICTED: hypothetical protein XP_002342882 [Homo sapiens] Length = 208 Score = 27.3 bits (59), Expect = 7.2 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 13/74 (17%) Query: 68 LGNYSKRASSRGSK----PGHWPAACTFLSHPP--ERTA------PHLRGPVASGLPRGL 115 L N+S+ A S + P H P +C S+PP ++ A P LRG V PR Sbjct: 87 LQNWSRAAPSETLQLPLAPTHTPGSCRCNSNPPGFQKVARCASFGPELRGGV-KDTPRRF 145 Query: 116 RVSVGSPHVSAASR 129 V SP A R Sbjct: 146 AVPPPSPRTPGARR 159 >gi|197276670 spermatogenesis and centriole associated 1 isoform 2 [Homo sapiens] Length = 441 Score = 27.3 bits (59), Expect = 7.2 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 11/128 (8%) Query: 9 STTRVATSTATRGHTGDRDSRVCAHADAPICTRT--GALRGPGLLTAGRVFNSNILNYKS 66 +TT+V ST T D + A A AP+ T T GA+ P TA FN++ + Sbjct: 252 ATTKVPLSTEPPQSTQDPEPLSMAFAGAPLQTSTPIGAMGTPAPKTAFS-FNTSDTQAQP 310 Query: 67 KLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRG--LRVSVGSPHV 124 +S + P P S AP L VA+ ++ G+PH Sbjct: 311 SAAQEQVVPASVPTSPTTSPTVTVLAS------APALAPQVATSYTPSSTTHIAQGAPHP 364 Query: 125 SAASRSSP 132 + +SP Sbjct: 365 PSRMHNSP 372 >gi|197276668 spermatogenesis and centriole associated 1 isoform 1 [Homo sapiens] Length = 591 Score = 27.3 bits (59), Expect = 7.2 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 11/128 (8%) Query: 9 STTRVATSTATRGHTGDRDSRVCAHADAPICTRT--GALRGPGLLTAGRVFNSNILNYKS 66 +TT+V ST T D + A A AP+ T T GA+ P TA FN++ + Sbjct: 252 ATTKVPLSTEPPQSTQDPEPLSMAFAGAPLQTSTPIGAMGTPAPKTAFS-FNTSDTQAQP 310 Query: 67 KLGNYSKRASSRGSKPGHWPAACTFLSHPPERTAPHLRGPVASGLPRG--LRVSVGSPHV 124 +S + P P S AP L VA+ ++ G+PH Sbjct: 311 SAAQEQVVPASVPTSPTTSPTVTVLAS------APALAPQVATSYTPSSTTHIAQGAPHP 364 Query: 125 SAASRSSP 132 + +SP Sbjct: 365 PSRMHNSP 372 >gi|39777614 SS18-like protein 1 [Homo sapiens] Length = 396 Score = 27.3 bits (59), Expect = 7.2 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 10 TTRVATSTATRGHTGDRDSRVCAHADAP--ICTRTGALRGPGLLTAGRVFNSNILNYKSK 67 +T + S+ +G G+ S V AP + T + ++ GPG AG + + Sbjct: 110 STGLPPSSLLQGQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGT 169 Query: 68 LGNYSKRAS 76 +GNY R + Sbjct: 170 IGNYVSRTN 178 >gi|41281808 harmonin isoform b3 [Homo sapiens] Length = 899 Score = 26.9 bits (58), Expect = 9.4 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 13/58 (22%) Query: 82 PGHWPAACTFLSHPPERTAPHLRGPVASGLPRGLRVSVGSPHVSAAS-----RSSPPL 134 P P+A + HPP PH + P LP S HVSA+S R+ PP+ Sbjct: 554 PPKTPSALPVMPHPPPSNPPH-KVPAPPVLPL-------SGHVSASSSPWVQRTPPPI 603 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.131 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,535,007 Number of Sequences: 37866 Number of extensions: 357675 Number of successful extensions: 1185 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 32 Number of HSP's that attempted gapping in prelim test: 1168 Number of HSP's gapped (non-prelim): 54 length of query: 179 length of database: 18,247,518 effective HSP length: 96 effective length of query: 83 effective length of database: 14,612,382 effective search space: 1212827706 effective search space used: 1212827706 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.