SPATC1 11391

Name: SPATC1	Sequence: fasta or formatted (441aa)		NCBI GI: 197276670
Description: spermatogenesis and centriole associated 1 isoform 2		Referenced in: Testes and Sperm
Other entries for this name: alt prot [591aa] spermatogenesis and centriole associated 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 43 2 C cysteine 0.5 2 1 D aspartate 0.7 3 1 E glutamate 5.0 22 2 F phenylalanine 1.8 8 1 G glycine 6.6 29 2 H histidine 2.0 9 1 I isoleucine 2.0 9 1 K lysine 2.3 10 2 L leucine 10.9 48 2 M methionine 2.7 12 2 N asparagine 3.4 15 2 P proline 14.1 62 2 Q glutamine 4.3 19 1 R arginine 3.9 17 1 S serine 13.4 59 3 T threonine 10.7 47 2 V valine 5.7 25 2 W tryptophan 0.0 0 0 Y tyrosine 0.5 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spermatogenesis and centriole associated 1 isoform ... SPATC1 0.983 spermatogenesis and centriole associated 1 isoform ... FLJ22184 0.076 PREDICTED: hypothetical protein FLJ22184 MUC2 0.076 mucin 2 precursor FLJ22184 0.064 PREDICTED: hypothetical protein FLJ22184 LOC100294420 0.062 PREDICTED: similar to mucin 2 SRCAP 0.061 Snf2-related CBP activator protein MUC5AC 0.058 mucin 5AC NACA 0.057 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.056 PREDICTED: hypothetical protein LOC80164 MUC5B 0.056 mucin 5, subtype B, tracheobronchial MUC17 0.053 mucin 17 LOC100133756 0.050 PREDICTED: hypothetical protein, partial POLR2A 0.049 DNA-directed RNA polymerase II A LOC100128719 0.048 PREDICTED: hypothetical protein, partial LOC100128719 0.048 PREDICTED: hypothetical protein, partial MUC6 0.048 mucin 6, gastric BAT2D1 0.048 HBxAg transactivated protein 2 MUC12 0.046 PREDICTED: mucin 12 GLTSCR1 0.046 glioma tumor suppressor candidate region gene 1 [Ho... MUC7 0.045 mucin 7, secreted precursor LOC100292286 0.045 PREDICTED: similar to spermatogenesis and centriole... LOC100288424 0.045 PREDICTED: hypothetical protein XP_002342922 MUC7 0.045 mucin 7, secreted precursor MUC7 0.045 mucin 7, secreted precursor LOC284297 0.044 hypothetical protein LOC284297 CIC 0.044 capicua homolog LOC100134147 0.044 PREDICTED: hypothetical protein FAM65A 0.043 hypothetical protein LOC79567 PRG4 0.042 proteoglycan 4 isoform D Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.