Guide to the Human Genome
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Name: FRMD4A Sequence: fasta or formatted (1039aa) NCBI GI: 116063562
Description:

FERM domain containing 4A

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         70           2
 C cysteine            1.0         10           1
 D aspartate           4.7         49           2
 E glutamate           6.8         71           2
 F phenylalanine       2.3         24           2
 G glycine             6.5         68           4
 H histidine           3.8         39           2
 I isoleucine          4.1         43           2
 K lysine              6.5         68           2
 L leucine             9.4         98           2
 M methionine          1.4         15           2
 N asparagine          2.6         27           1
 P proline             5.8         60           4
 Q glutamine           4.9         51           1
 R arginine            6.4         67           3
 S serine             13.6        141           3
 T threonine           4.8         50           1
 V valine              3.9         41           3
 W tryptophan          1.1         11           2
 Y tyrosine            3.5         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FERM domain containing 4A 
FRMD4B                0.402   FERM domain containing 4B 
C1orf106              0.097   hypothetical protein LOC55765 isoform 1 
C1orf106              0.097   hypothetical protein LOC55765 isoform 2 
MSN                   0.062   moesin 
RDX                   0.061   radixin 
EZR                   0.058   ezrin 
EZR                   0.058   ezrin 
NF2                   0.057   neurofibromin 2 isoform 2 
NF2                   0.057   neurofibromin 2 isoform 2 
NF2                   0.057   neurofibromin 2 isoform 2 
NF2                   0.057   neurofibromin 2 isoform 1 
CCDC120               0.050   coiled-coil domain containing 120 isoform 3 
CCDC120               0.050   coiled-coil domain containing 120 isoform 1 
CCDC120               0.049   coiled-coil domain containing 120 isoform 4 
CCDC120               0.049   coiled-coil domain containing 120 isoform 2 
NF2                   0.043   neurofibromin 2 isoform 5 
EPB41L5               0.042   erythrocyte membrane protein band 4.1 like 5 
FRMD5                 0.041   FERM domain containing 5 isoform 2 
EPB41L1               0.039   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.039   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L4A              0.039   erythrocyte protein band 4.1-like 4 
FRMD3                 0.039   FERM domain containing 3 
FRMD7                 0.038   FERM domain containing 7 
FARP1                 0.037   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
NF2                   0.037   neurofibromin 2 isoform 6 
FARP2                 0.036   FERM, RhoGEF and pleckstrin domain protein 2 
PTPN21                0.036   protein tyrosine phosphatase, non-receptor type 21 ...
EPB41L3               0.035   erythrocyte membrane protein band 4.1-like 3 
EPB41L4B              0.035   erythrocyte membrane protein band 4.1 like 4B isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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