Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FLJ46906 Sequence: fasta or formatted (213aa) NCBI GI: 169169843
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {324aa} PREDICTED: hypothetical protein LOC441172
alt prot {324aa} PREDICTED: hypothetical protein LOC441172
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         25           2
 C cysteine            1.4          3           1
 D aspartate           1.9          4           1
 E glutamate           6.6         14           2
 F phenylalanine       0.9          2           1
 G glycine            12.7         27           2
 H histidine           1.9          4           1
 I isoleucine          1.9          4           1
 K lysine              3.3          7           2
 L leucine             8.5         18           2
 M methionine          0.5          1           1
 N asparagine          2.8          6           1
 P proline             7.0         15           3
 Q glutamine           4.7         10           1
 R arginine            9.4         20           3
 S serine              8.9         19           3
 T threonine           5.6         12           1
 V valine              7.5         16           2
 W tryptophan          2.3          5           2
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FLJ46906              0.941   PREDICTED: hypothetical protein LOC441172 
FLJ46906              0.941   PREDICTED: hypothetical protein LOC441172 
IRS2                  0.039   insulin receptor substrate 2 
PANX2                 0.027   pannexin 2 isoform 1 
PANX2                 0.027   pannexin 2 isoform 2 
TTC15                 0.025   tetratricopeptide repeat domain 15 
LOC100289284          0.022   PREDICTED: hypothetical protein XP_002342335 
ZBED3                 0.022   zinc finger, BED-type containing 3 
GIPC1                 0.020   regulator of G-protein signalling 19 interacting pro...
GIPC1                 0.020   regulator of G-protein signalling 19 interacting pro...
GIPC1                 0.020   regulator of G-protein signalling 19 interacting prot...
USP31                 0.020   ubiquitin specific peptidase 31 
CITED1                0.020   melanocyte-specific gene 1 isoform 1 
CITED1                0.020   melanocyte-specific gene 1 isoform 1 
CITED1                0.020   melanocyte-specific gene 1 isoform 2 
CITED1                0.020   melanocyte-specific gene 1 isoform 1 
LOC728052             0.020   PREDICTED: hypothetical protein 
LOC100291220          0.020   PREDICTED: hypothetical protein XP_002347633 
LOC100287224          0.020   PREDICTED: hypothetical protein XP_002343483 
RXRB                  0.017   retinoid X receptor, beta 
LOC100292196          0.017   PREDICTED: hypothetical protein 
KIAA1539              0.017   hypothetical protein LOC80256 
OTUD7A                0.017   OTU domain containing 7A 
WIPF2                 0.017   WIRE protein 
DCAF10                0.017   WD repeat domain 32 
LOC100291129          0.017   PREDICTED: hypothetical protein XP_002347815 
FBXO46                0.017   F-box protein 46 
PALM3                 0.015   hypothetical protein LOC342979 
CACNA1A               0.015   calcium channel, alpha 1A subunit isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press