Guide to the Human Genome
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Name: FLJ46906 Sequence: fasta or formatted (324aa) NCBI GI: 169168890
Description:

PREDICTED: hypothetical protein LOC441172

Not currently referenced in the text

Other entries for this name:
alt mRNA {324aa} PREDICTED: hypothetical protein LOC441172
alt prot {213aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         38           2
 C cysteine            1.9          6           1
 D aspartate           2.5          8           1
 E glutamate           5.9         19           2
 F phenylalanine       1.5          5           1
 G glycine             9.9         32           2
 H histidine           2.5          8           1
 I isoleucine          1.2          4           1
 K lysine              4.3         14           3
 L leucine             9.9         32           2
 M methionine          0.6          2           1
 N asparagine          2.2          7           1
 P proline             8.0         26           3
 Q glutamine           5.2         17           1
 R arginine            7.4         24           3
 S serine             11.7         38           3
 T threonine           4.6         15           1
 V valine              6.8         22           2
 W tryptophan          2.2          7           2
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC441172 
FLJ46906              1.000   PREDICTED: hypothetical protein LOC441172 
FLJ46906              0.610   PREDICTED: hypothetical protein 
IRS2                  0.027   insulin receptor substrate 2 
PANX2                 0.018   pannexin 2 isoform 1 
PANX2                 0.018   pannexin 2 isoform 2 
TTC15                 0.016   tetratricopeptide repeat domain 15 
LOC100289284          0.014   PREDICTED: hypothetical protein XP_002342335 
ZBED3                 0.014   zinc finger, BED-type containing 3 
LOC728052             0.013   PREDICTED: hypothetical protein 
GIPC1                 0.013   regulator of G-protein signalling 19 interacting pro...
GIPC1                 0.013   regulator of G-protein signalling 19 interacting pro...
GIPC1                 0.013   regulator of G-protein signalling 19 interacting prot...
USP31                 0.013   ubiquitin specific peptidase 31 
CITED1                0.013   melanocyte-specific gene 1 isoform 1 
CITED1                0.013   melanocyte-specific gene 1 isoform 1 
CITED1                0.013   melanocyte-specific gene 1 isoform 2 
CITED1                0.013   melanocyte-specific gene 1 isoform 1 
LOC100291220          0.013   PREDICTED: hypothetical protein XP_002347633 
LOC100287224          0.013   PREDICTED: hypothetical protein XP_002343483 
RXRB                  0.011   retinoid X receptor, beta 
LOC100292196          0.011   PREDICTED: hypothetical protein 
KIAA1539              0.011   hypothetical protein LOC80256 
FOXK1                 0.011   forkhead box K1 
OTUD7A                0.011   OTU domain containing 7A 
WIPF2                 0.011   WIRE protein 
DCAF10                0.011   WD repeat domain 32 
LOC100291129          0.011   PREDICTED: hypothetical protein XP_002347815 
FBXO46                0.011   F-box protein 46 
PALM3                 0.010   hypothetical protein LOC342979 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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