Guide to the Human Genome
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Name: GIPC1 Sequence: fasta or formatted (333aa) NCBI GI: 5031715
Description:

regulator of G-protein signalling 19 interacting protein 1 isoform 1

Referenced in:

G Proteins
PDZ Domain

Other entries for this name:
alt mRNA [333aa] regulator of G-protein signalling 19 interacting protein 1 isoform 1
alt prot [236aa] regulator of G-protein signalling 19 interacting protein 1 isoform 2
alt mRNA [333aa] regulator of G-protein signalling 19 interacting protein 1 isoform 1
alt prot [236aa] regulator of G-protein signalling 19 interacting protein 1 isoform 2
alt prot [236aa] regulator of G-protein signalling 19 interacting protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         25           2
 C cysteine            0.6          2           1
 D aspartate           5.7         19           2
 E glutamate           8.7         29           2
 F phenylalanine       4.5         15           1
 G glycine            13.5         45           4
 H histidine           2.1          7           1
 I isoleucine          4.8         16           1
 K lysine              5.7         19           2
 L leucine            10.8         36           2
 M methionine          2.4          8           1
 N asparagine          1.8          6           1
 P proline             6.9         23           5
 Q glutamine           2.1          7           1
 R arginine            7.2         24           2
 S serine              3.6         12           1
 T threonine           4.8         16           1
 V valine              5.4         18           1
 W tryptophan          0.3          1           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regulator of G-protein signalling 19 interacting prot... 
GIPC1                 1.000   regulator of G-protein signalling 19 interacting pro...
GIPC1                 1.000   regulator of G-protein signalling 19 interacting pro...
GIPC1                 0.691   regulator of G-protein signalling 19 interacting pro...
GIPC1                 0.691   regulator of G-protein signalling 19 interacting pro...
GIPC1                 0.691   regulator of G-protein signalling 19 interacting pro...
GIPC3                 0.564   GIPC PDZ domain containing family, member 3 
GIPC2                 0.556   PDZ domain protein GIPC2 
PDZD2                 0.040   PDZ domain containing 2 
MPP3                  0.026   palmitoylated membrane protein 3 
MPDZ                  0.025   multiple PDZ domain protein 
MAGI2                 0.025   membrane associated guanylate kinase, WW and PDZ dom...
LNX1                  0.025   ligand of numb-protein X 1 isoform a 
LNX1                  0.025   ligand of numb-protein X 1 isoform b 
MAGI1                 0.023   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.023   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.023   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.023   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.023   membrane-associated guanylate kinase-related  3 iso...
GRIP1                 0.023   glutamate receptor interacting protein 1 
CASK                  0.023   calcium/calmodulin-dependent serine protein kinase ...
GRID2IP               0.022   glutamate receptor, ionotropic, delta 2 (Grid2) int...
GRIP2                 0.022   glutamate receptor interacting protein 2 
MPP7                  0.022   palmitoylated membrane protein 7 
PRCC                  0.020   papillary renal cell carcinoma translocation-associa...
PPP1R9A               0.020   protein phosphatase 1, regulatory (inhibitor) subuni...
PRCC                  0.020   papillary renal cell carcinoma translocation-associa...
HNRNPK                0.020   heterogeneous nuclear ribonucleoprotein K isoform a ...
HNRNPK                0.020   heterogeneous nuclear ribonucleoprotein K isoform b ...
HNRNPK                0.020   heterogeneous nuclear ribonucleoprotein K isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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