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Search of human proteins with 169169339
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169169339 PREDICTED: hypothetical protein LOC441172 [Homo
sapiens]
(324 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168890 PREDICTED: hypothetical protein LOC441172 [Homo sap... 651 0.0
gi|169169339 PREDICTED: hypothetical protein LOC441172 [Homo sap... 651 0.0
gi|169169843 PREDICTED: hypothetical protein [Homo sapiens] 407 e-114
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 42 0.001
gi|163659920 pannexin 2 isoform 1 [Homo sapiens] 36 0.041
gi|237757297 pannexin 2 isoform 2 [Homo sapiens] 36 0.041
gi|40548372 tetratricopeptide repeat domain 15 [Homo sapiens] 35 0.090
gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo ... 34 0.20
gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens] 34 0.20
gi|239754342 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|42544140 regulator of G-protein signalling 19 interacting pro... 33 0.26
gi|42544144 regulator of G-protein signalling 19 interacting pro... 33 0.26
gi|5031715 regulator of G-protein signalling 19 interacting prot... 33 0.26
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 33 0.34
gi|222136692 melanocyte-specific gene 1 isoform 1 [Homo sapiens] 33 0.45
gi|222136690 melanocyte-specific gene 1 isoform 1 [Homo sapiens] 33 0.45
gi|222136688 melanocyte-specific gene 1 isoform 2 [Homo sapiens] 33 0.45
gi|222136686 melanocyte-specific gene 1 isoform 1 [Homo sapiens] 33 0.45
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 33 0.45
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 33 0.45
gi|11415052 retinoid X receptor, beta [Homo sapiens] 32 0.59
gi|239756199 PREDICTED: hypothetical protein [Homo sapiens] 32 0.59
gi|33636717 hypothetical protein LOC80256 [Homo sapiens] 32 0.77
gi|82546824 forkhead box K1 [Homo sapiens] 32 0.77
gi|18702331 OTU domain containing 7A [Homo sapiens] 32 0.77
gi|18959210 WIRE protein [Homo sapiens] 32 0.77
gi|110815800 WD repeat domain 32 [Homo sapiens] 32 1.0
gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ... 32 1.0
gi|122937335 F-box protein 46 [Homo sapiens] 32 1.0
gi|222537747 hypothetical protein LOC342979 [Homo sapiens] 31 1.3
>gi|169168890 PREDICTED: hypothetical protein LOC441172 [Homo
sapiens]
Length = 324
Score = 651 bits (1680), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA 60
MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA
Sbjct: 1 MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA 60
Query: 61 PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG 120
PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG
Sbjct: 61 PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG 120
Query: 121 LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA 180
LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA
Sbjct: 121 LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA 180
Query: 181 GKRGVEAGSKACTELDLWWNGSPTLGLIPHMVSETHTVWLEDSTVTSQAQPSASPPLAAL 240
GKRGVEAGSKACTELDLWWNGSPTLGLIPHMVSETHTVWLEDSTVTSQAQPSASPPLAAL
Sbjct: 181 GKRGVEAGSKACTELDLWWNGSPTLGLIPHMVSETHTVWLEDSTVTSQAQPSASPPLAAL 240
Query: 241 GCWPSSDGSRAQSAVSQEKPASSLRGLEEPFSLSLVFDASAPAHCGVRVGLSAQPCPNKS 300
GCWPSSDGSRAQSAVSQEKPASSLRGLEEPFSLSLVFDASAPAHCGVRVGLSAQPCPNKS
Sbjct: 241 GCWPSSDGSRAQSAVSQEKPASSLRGLEEPFSLSLVFDASAPAHCGVRVGLSAQPCPNKS 300
Query: 301 SKALFHLQSLDHQELRKKKGALGA 324
SKALFHLQSLDHQELRKKKGALGA
Sbjct: 301 SKALFHLQSLDHQELRKKKGALGA 324
>gi|169169339 PREDICTED: hypothetical protein LOC441172 [Homo
sapiens]
Length = 324
Score = 651 bits (1680), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA 60
MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA
Sbjct: 1 MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA 60
Query: 61 PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG 120
PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG
Sbjct: 61 PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG 120
Query: 121 LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA 180
LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA
Sbjct: 121 LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA 180
Query: 181 GKRGVEAGSKACTELDLWWNGSPTLGLIPHMVSETHTVWLEDSTVTSQAQPSASPPLAAL 240
GKRGVEAGSKACTELDLWWNGSPTLGLIPHMVSETHTVWLEDSTVTSQAQPSASPPLAAL
Sbjct: 181 GKRGVEAGSKACTELDLWWNGSPTLGLIPHMVSETHTVWLEDSTVTSQAQPSASPPLAAL 240
Query: 241 GCWPSSDGSRAQSAVSQEKPASSLRGLEEPFSLSLVFDASAPAHCGVRVGLSAQPCPNKS 300
GCWPSSDGSRAQSAVSQEKPASSLRGLEEPFSLSLVFDASAPAHCGVRVGLSAQPCPNKS
Sbjct: 241 GCWPSSDGSRAQSAVSQEKPASSLRGLEEPFSLSLVFDASAPAHCGVRVGLSAQPCPNKS 300
Query: 301 SKALFHLQSLDHQELRKKKGALGA 324
SKALFHLQSLDHQELRKKKGALGA
Sbjct: 301 SKALFHLQSLDHQELRKKKGALGA 324
>gi|169169843 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 407 bits (1045), Expect = e-114
Identities = 202/207 (97%), Positives = 203/207 (98%)
Query: 1 MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA 60
MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA
Sbjct: 1 MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA 60
Query: 61 PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG 120
PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG
Sbjct: 61 PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGG 120
Query: 121 LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA 180
LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA
Sbjct: 121 LQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLA 180
Query: 181 GKRGVEAGSKACTELDLWWNGSPTLGL 207
G+RGVEAGSKACTELDLWWNG GL
Sbjct: 181 GERGVEAGSKACTELDLWWNGVTHAGL 207
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 41.6 bits (96), Expect = 0.001
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 29/218 (13%)
Query: 1 MNGIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAA 60
M ++ L S+SQ +G S S P G +V L TG R R
Sbjct: 291 MKALKELFEFRPRSKSQSSGSSATHPI--SVP-GARRHHHLVNLPPSQTGLVRRSR---T 344
Query: 61 PTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAG-----------SPPPARRPLTDF 109
+LA P + V +T +G GG+++ GA+ AG SP P R PL+
Sbjct: 345 DSLAATPPAAKCSSCRV-RTASEGDGGAAA-GAAAAGARPVSVAGSPLSPGPVRAPLSRS 402
Query: 110 HSAVVQARSGGLQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSF--- 166
H+ + GG A + GGA+ +++ +A P A G L + S
Sbjct: 403 HT--LSGGCGGRGSKVALLPAGGALQHSRSMSMPVAHSPPAATSPGSLSSSSGHGSGSYP 460
Query: 167 VPPRCHPPTAHLLAGKRGVEAGSKACTELDLWWNGSPT 204
PP HPP H L G S + + +GSP+
Sbjct: 461 PPPGPHPPLPHPLHHGPGQRPSSGSASA-----SGSPS 493
>gi|163659920 pannexin 2 isoform 1 [Homo sapiens]
Length = 677
Score = 36.2 bits (82), Expect = 0.041
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 83 QGAGGSSSPGASPAGSPPP------ARRPLTDFHSAVVQARSGGLQGVEAAV-----QRG 131
+G GG PG +PA +PPP AR D H ++ + + V AA+ Q G
Sbjct: 485 KGGGGDPGPGPAPAPAPPPAPDKKHARHFSLDVHPYILGTKKAKAEAVPAALPASRSQEG 544
Query: 132 GAVAQRGRLALELA 145
G ++Q L LA
Sbjct: 545 GFLSQAEDCGLGLA 558
>gi|237757297 pannexin 2 isoform 2 [Homo sapiens]
Length = 643
Score = 36.2 bits (82), Expect = 0.041
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 83 QGAGGSSSPGASPAGSPPP------ARRPLTDFHSAVVQARSGGLQGVEAAV-----QRG 131
+G GG PG +PA +PPP AR D H ++ + + V AA+ Q G
Sbjct: 485 KGGGGDPGPGPAPAPAPPPAPDKKHARHFSLDVHPYILGTKKAKAEAVPAALPASRSQEG 544
Query: 132 GAVAQRGRLALELA 145
G ++Q L LA
Sbjct: 545 GFLSQAEDCGLGLA 558
>gi|40548372 tetratricopeptide repeat domain 15 [Homo sapiens]
Length = 735
Score = 35.0 bits (79), Expect = 0.090
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 86 GGSSSPGASPAGSPPPARRPLTDFHSAVVQARSGGLQGVEAAVQRGGAVAQRGRLALELA 145
GG PG PAG+P P+ D SGG +AA + G+ A R +A
Sbjct: 95 GGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAARPEQEPPVA 154
Query: 146 EDVP 149
E VP
Sbjct: 155 EPVP 158
>gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo
sapiens]
Length = 347
Score = 33.9 bits (76), Expect = 0.20
Identities = 52/189 (27%), Positives = 69/189 (36%), Gaps = 30/189 (15%)
Query: 3 GIQSLNSRSTSSESQRAGGSVWEKKENSAPNGKTLKVCIVLLVGKNTGRRREERWQAAP- 61
G QS+ +S + ESQ A G K+ AP G +GR + P
Sbjct: 132 GAQSMEPQSRAWESQPADG---RKQSREAPRSG--------YEGDGSGRGCRDSGATYPA 180
Query: 62 ----TLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRP---LTDFHSAVV 114
+LAE RV PE R GA G P + + PARRP L + A V
Sbjct: 181 GARRSLAEAERVGPKPLPEQE---RSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPV 237
Query: 115 QARSGGLQGVEAAVQR--GGAVAQRGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCH 172
S + + + R G A+R R GAA G + + + H
Sbjct: 238 APPSSARPALPSFLLRPSGYLAARRQR------GPGSGAAETGFRGSCAGCGRGLRIQSH 291
Query: 173 PPTAHLLAG 181
P T HL G
Sbjct: 292 PGTTHLHQG 300
>gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens]
Length = 234
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 83 QGAGGSSSPGASPAGSPP-PARRPLTDFHSAVVQ---------ARSGGLQGVEAAVQRGG 132
+ +G SSP A+P PP PA P D+ + Q R L+ E AV++G
Sbjct: 102 ESSGAGSSPPAAPCPPPPGPAAAPEGDWARLLEQMGALAVRGSRRERELERRELAVEQGE 161
Query: 133 AVAQRGRLALELAEDVPGAARQGL 156
+R R AL+ E AR+ L
Sbjct: 162 RALERRRRALQEEERAAAQARREL 185
>gi|239754342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 33.5 bits (75), Expect = 0.26
Identities = 69/255 (27%), Positives = 84/255 (32%), Gaps = 46/255 (18%)
Query: 50 GRRREERWQAAPTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPAR---RP- 105
GRR ER A + RV R S G + AGG+ PGA P G P AR RP
Sbjct: 12 GRRERERDSKA-----LSRVCAPARSARSPLGAR-AGGARVPGARPRGGLPRARVRARPG 65
Query: 106 --LTDFHSAVVQARSG---GLQGVEAAVQRGGAVAQRGRLALELAEDVPGAARQGLLWTE 160
+A V+ + G +G AA A RGR+ E G +G
Sbjct: 66 CRAPFLCTAAVRPAARQRLGSRGAAAATSWSSACRGRGRVCEREGEGSRGVGEEG----- 120
Query: 161 VRARSFVPPRCHPPTAHLLAGKRGVEAGSKACTELDLWWNGSPTLGLIPHMVSETHTVWL 220
VP AG RG TEL P ++ H
Sbjct: 121 ------VP-----------AGGRGRGWREGGSTEL----QPGPRFACTSRLLKPKHVPKA 159
Query: 221 EDSTVTSQAQPSASP-PLAALGCWPSSDGSRAQSAVSQEKPASSLR---GLEEPFSLSLV 276
S P P LAA C +S G A E + GL+ SLS
Sbjct: 160 VFSASGRFLHPQFPPLGLAATNCKRNSLGGEAGGCGGWEGDSEGWEVNAGLDR-LSLSFS 218
Query: 277 FDASAPAHCGVRVGL 291
D S P C G+
Sbjct: 219 ADLSQPESCHFSTGI 233
>gi|42544140 regulator of G-protein signalling 19 interacting
protein 1 isoform 1 [Homo sapiens]
Length = 333
Score = 33.5 bits (75), Expect = 0.26
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 77 VSKTGRQGAGGSSSP--GASPAGSPPPARRPLTDFHSAVVQ-ARSGGLQGVEAAVQRGGA 133
V + G G GGS P G P PPPA RP FH+ + + +G ++G + G
Sbjct: 29 VGEPGPLGGGGSGGPQMGLPP---PPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGK 85
Query: 134 VAQRGRL 140
+A+ RL
Sbjct: 86 IAEAFRL 92
>gi|42544144 regulator of G-protein signalling 19 interacting
protein 1 isoform 1 [Homo sapiens]
Length = 333
Score = 33.5 bits (75), Expect = 0.26
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 77 VSKTGRQGAGGSSSP--GASPAGSPPPARRPLTDFHSAVVQ-ARSGGLQGVEAAVQRGGA 133
V + G G GGS P G P PPPA RP FH+ + + +G ++G + G
Sbjct: 29 VGEPGPLGGGGSGGPQMGLPP---PPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGK 85
Query: 134 VAQRGRL 140
+A+ RL
Sbjct: 86 IAEAFRL 92
>gi|5031715 regulator of G-protein signalling 19 interacting protein
1 isoform 1 [Homo sapiens]
Length = 333
Score = 33.5 bits (75), Expect = 0.26
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 77 VSKTGRQGAGGSSSP--GASPAGSPPPARRPLTDFHSAVVQ-ARSGGLQGVEAAVQRGGA 133
V + G G GGS P G P PPPA RP FH+ + + +G ++G + G
Sbjct: 29 VGEPGPLGGGGSGGPQMGLPP---PPPALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGK 85
Query: 134 VAQRGRL 140
+A+ RL
Sbjct: 86 IAEAFRL 92
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 33.1 bits (74), Expect = 0.34
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 79 KTGRQGAGGSSSPGASPAGSP-----PPARRPLTDFHSAVVQARS--GGLQGVEAAVQRG 131
++GR G GG+ PGAS +P P + R + F S V++ S L AA RG
Sbjct: 29 RSGRAGGGGAGGPGASGPAAPSSPSSPSSARSVGSFMSRVLKTLSTLSHLSSEGAAPDRG 88
Query: 132 G 132
G
Sbjct: 89 G 89
>gi|222136692 melanocyte-specific gene 1 isoform 1 [Homo sapiens]
Length = 193
Score = 32.7 bits (73), Expect = 0.45
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 75 PEVSKTGRQGAGGSSSPGASPAGSP---PPARRPLTDFHSAVVQARSGGLQGVEAAVQRG 131
P V+ G + +G +S SP GSP PP + P + H A S LQ + + Q G
Sbjct: 48 PGVASNGTKASGAPTSSSGSPIGSPTTTPPTKPPSFNLHPAPHLLASMHLQKLNSQYQ-G 106
Query: 132 GAVAQRGR 139
A A G+
Sbjct: 107 MAAATPGQ 114
>gi|222136690 melanocyte-specific gene 1 isoform 1 [Homo sapiens]
Length = 193
Score = 32.7 bits (73), Expect = 0.45
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 75 PEVSKTGRQGAGGSSSPGASPAGSP---PPARRPLTDFHSAVVQARSGGLQGVEAAVQRG 131
P V+ G + +G +S SP GSP PP + P + H A S LQ + + Q G
Sbjct: 48 PGVASNGTKASGAPTSSSGSPIGSPTTTPPTKPPSFNLHPAPHLLASMHLQKLNSQYQ-G 106
Query: 132 GAVAQRGR 139
A A G+
Sbjct: 107 MAAATPGQ 114
>gi|222136688 melanocyte-specific gene 1 isoform 2 [Homo sapiens]
Length = 219
Score = 32.7 bits (73), Expect = 0.45
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 75 PEVSKTGRQGAGGSSSPGASPAGSP---PPARRPLTDFHSAVVQARSGGLQGVEAAVQRG 131
P V+ G + +G +S SP GSP PP + P + H A S LQ + + Q G
Sbjct: 74 PGVASNGTKASGAPTSSSGSPIGSPTTTPPTKPPSFNLHPAPHLLASMHLQKLNSQYQ-G 132
Query: 132 GAVAQRGR 139
A A G+
Sbjct: 133 MAAATPGQ 140
>gi|222136686 melanocyte-specific gene 1 isoform 1 [Homo sapiens]
Length = 193
Score = 32.7 bits (73), Expect = 0.45
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 75 PEVSKTGRQGAGGSSSPGASPAGSP---PPARRPLTDFHSAVVQARSGGLQGVEAAVQRG 131
P V+ G + +G +S SP GSP PP + P + H A S LQ + + Q G
Sbjct: 48 PGVASNGTKASGAPTSSSGSPIGSPTTTPPTKPPSFNLHPAPHLLASMHLQKLNSQYQ-G 106
Query: 132 GAVAQRGR 139
A A G+
Sbjct: 107 MAAATPGQ 114
>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.45
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 12/54 (22%)
Query: 61 PTLAEIPRVLQTDRPEVSKTGRQGAG------------GSSSPGASPAGSPPPA 102
PTL +P RP + GR GA G SSP A+P PPP+
Sbjct: 175 PTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPS 228
>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.45
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 12/54 (22%)
Query: 61 PTLAEIPRVLQTDRPEVSKTGRQGAG------------GSSSPGASPAGSPPPA 102
PTL +P RP + GR GA G SSP A+P PPP+
Sbjct: 175 PTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPS 228
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 32.3 bits (72), Expect = 0.59
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 12/63 (19%)
Query: 52 RREERW---QAAPTLAEIPRVLQTDRPEVSKTGRQGAG---------GSSSPGASPAGSP 99
RR W AA A QT PE + GR G G SSSP P G P
Sbjct: 37 RRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVP 96
Query: 100 PPA 102
PP+
Sbjct: 97 PPS 99
>gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 32.3 bits (72), Expect = 0.59
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 80 TGRQGAGGSSSPGASPAGS---PPPARRPLTDFHSAVVQARSGGLQGVEAAVQRGGAVAQ 136
+GR GAG S +SPAGS P P + + + A GG E ++ G
Sbjct: 13 SGRVGAGLSCRALSSPAGSRRAPGPTTQVALE-QGSDPHAAPGGAGSGEGGLEEAGVGVS 71
Query: 137 RGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLAG 181
A D G QG W + + +P +C ++H AG
Sbjct: 72 --------ASDEAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAG 108
>gi|33636717 hypothetical protein LOC80256 [Homo sapiens]
Length = 538
Score = 32.0 bits (71), Expect = 0.77
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 82 RQGAGGSSSPGASPAGSPPPARRPLTDFHSAVVQAR---SGGLQGVEAAVQRGGA 133
R+G G S P ASP +P +R L +F ++++ R SG ++G A + G+
Sbjct: 325 RKGPGLLSPPSASPVPTPAVSRTLLGNFEESLLRGRFAPSGHIEGFTAEIGASGS 379
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 32.0 bits (71), Expect = 0.77
Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 16/215 (7%)
Query: 94 SPAGSPPPARRPLTDFHSAVVQARSGGLQGVEAAVQRGGAVAQRGRLALELAEDVPGAAR 153
+P G P + H ++ RSGGLQ E + G + +LA
Sbjct: 407 TPFGPLSSRSAPASPTHPGLMSPRSGGLQTPECLSREGSPIPHDPEFGSKLASVPEYRYS 466
Query: 154 QGLLWTEVRARSFVPPRCHPPTAHLLAGKRGVEAGSKACTELDLWWNGSPTLGLIPHMVS 213
Q + V A+ + PP L K + T G H+V
Sbjct: 467 QSAPGSPVSAQPVI--MAVPPRPSSLVAKPVAYMPASIVT-------SQQPAGHAIHVVQ 517
Query: 214 ETHTVWLEDSTVTSQAQPSASPPLAALGCWPSSDGSRAQSAVSQEKPASSLRGLEEPFSL 273
+ TV + VT+ A + L + G ++ GS + + S RGLEE ++
Sbjct: 518 QAPTVTMV-RVVTTSANSANGYILTSQG---AAGGSHDAAGAAVLDLGSEARGLEEKPTI 573
Query: 274 SLVFDASAPAHCGVRVGLSAQPCPNKSSKALFHLQ 308
+ A+ PA GV +++Q P + LQ
Sbjct: 574 AF---ATIPAAGGVIQTVASQMAPGVPGHTVTILQ 605
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 32.0 bits (71), Expect = 0.77
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 75 PEVSKTGRQGAGGSSSPGA----SPAGSPPPARRPLTDFHSAVVQARSGGLQGVEAAVQR 130
P + R AGG++SPG + A P P R P +V+ ++ G + EA
Sbjct: 729 PAAGRAARAAAGGTASPGGGARRASASGPVPGRSPPAPARQSVIHVQASGARD-EACAPA 787
Query: 131 GGAV 134
GA+
Sbjct: 788 VGAL 791
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 32.0 bits (71), Expect = 0.77
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 45 VGKNTGRRREERWQAAPTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARR 104
V +GR +++ + +L E+PR+ + P++S+ + G ++P PPP RR
Sbjct: 127 VSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSSAPP-PPPPGRR 185
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 31.6 bits (70), Expect = 1.0
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 53 REERWQAAPTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRPLTDFHSA 112
R R AP+L+ PR E+ G + +S+PG P+ PP RRP D
Sbjct: 52 RSPRRPGAPSLSPAPR-----SGELGLPGAPESSTASAPG-EPSPPSPPCRRPGPD---- 101
Query: 113 VVQARSGGLQGVEAAVQRGGA 133
+A+S G G+ A + GA
Sbjct: 102 -CRAKSRGRHGLGAGLGGPGA 121
>gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo
sapiens]
Length = 697
Score = 31.6 bits (70), Expect = 1.0
Identities = 37/107 (34%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Query: 50 GRRREERWQAAPTLAEIPRVLQTDRPEVSKTGRQGAGGSSS--PGASPAGSPPPARRPLT 107
G + + WQA A + R R QGAG +S GA A A +P+
Sbjct: 519 GPQVQAGWQAGRQAAALGRGAALRR------AAQGAGSASGLLGGAVGARGRRRAHKPV- 571
Query: 108 DFHSAVVQARSGGLQGVEAAVQR--GGAVAQRGRLALELAEDVPGAA 152
VV R G +G R GG VAQRG+LA L V GAA
Sbjct: 572 -----VVGERLRG-RGARVGTWRRGGGRVAQRGQLAHVLRRQVEGAA 612
>gi|122937335 F-box protein 46 [Homo sapiens]
Length = 603
Score = 31.6 bits (70), Expect = 1.0
Identities = 27/106 (25%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 50 GRRREERWQAAPTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRP---- 105
G R+EER P I + R + +GG PG + GSP P R
Sbjct: 245 GLRKEERPGPGPGEVRIAFRISNGREPRAPDSGLPSGGGGRPGCAYPGSPGPGARAKDKI 304
Query: 106 LTDFHSAVVQARSGGLQGVEAAVQRGGAVAQRGRLALELAEDVPGA 151
D + + +R VE + R ++ A ED P A
Sbjct: 305 TCDLYQLISPSRDALPSNVEFLLARADEASEGDSPAPARPEDTPPA 350
>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
Length = 673
Score = 31.2 bits (69), Expect = 1.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 59 AAPTLAEIPRVLQTDRPEVSKTGRQGAGGSSSPGASPAGSPPPARRP 105
A P LAE P ++P + QG G S++P A P + PAR+P
Sbjct: 605 ATPLLAETPA---PEQPAECQPLLQGEGPSANPSAHPVPTYAPARQP 648
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,333,369
Number of Sequences: 37866
Number of extensions: 726828
Number of successful extensions: 4086
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 3974
Number of HSP's gapped (non-prelim): 192
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.