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Search of human proteins with 169165075
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169165075 PREDICTED: hypothetical protein [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169165075 PREDICTED: hypothetical protein [Homo sapiens] 288 1e-78
gi|239756833 PREDICTED: hypothetical protein [Homo sapiens] 79 1e-15
gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ... 79 1e-15
gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ... 79 1e-15
gi|239756669 PREDICTED: hypothetical protein [Homo sapiens] 35 0.017
gi|239751161 PREDICTED: hypothetical protein XP_002347738 [Homo ... 35 0.017
gi|239752797 PREDICTED: hypothetical protein [Homo sapiens] 34 0.050
gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo ... 34 0.050
gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo ... 34 0.050
gi|20357578 apobec-1 complementation factor isoform 3 [Homo sapi... 32 0.25
gi|20357575 apobec-1 complementation factor isoform 2 [Homo sapi... 32 0.25
gi|20357572 apobec-1 complementation factor isoform 1 [Homo sapi... 32 0.25
gi|47132591 protein kinase N1 isoform 1 [Homo sapiens] 32 0.25
gi|47132589 protein kinase N1 isoform 2 [Homo sapiens] 32 0.25
gi|154689769 folliculin interacting protein 2 [Homo sapiens] 30 0.55
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens] 30 0.55
gi|239750031 PREDICTED: hypothetical protein [Homo sapiens] 30 0.95
gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo ... 30 0.95
gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo ... 30 0.95
gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo ... 30 0.95
gi|239508721 PREDICTED: hypothetical protein [Homo sapiens] 30 0.95
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 30 0.95
gi|239755499 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|239755583 PREDICTED: hypothetical protein [Homo sapiens] 28 2.8
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 28 2.8
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 28 2.8
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens] 28 2.8
>gi|169165075 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 288 bits (736), Expect = 1e-78
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MTQRQALWFRGVRGHSQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQ 60
MTQRQALWFRGVRGHSQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQ
Sbjct: 1 MTQRQALWFRGVRGHSQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQ 60
Query: 61 QAPEEAQLGIAGEAGGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGRLERHQL 120
QAPEEAQLGIAGEAGGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGRLERHQL
Sbjct: 61 QAPEEAQLGIAGEAGGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGRLERHQL 120
Query: 121 VPWEAAEAVAFVLGAPGAQRAGHAQQR 147
VPWEAAEAVAFVLGAPGAQRAGHAQQR
Sbjct: 121 VPWEAAEAVAFVLGAPGAQRAGHAQQR 147
>gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 79.3 bits (194), Expect = 1e-15
Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 24/138 (17%)
Query: 28 AALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLG----IAGEAGGGLGLRRG 83
AALEV Q L +G EG Q LAA +A + Q A EE QL A G GLG RG
Sbjct: 82 AALEVTQQLPRRVGHLEGGQRPLAAPQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRG 141
Query: 84 AA-VAVAEGLAVAH-------------ALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAV 129
AA V VAEGLAVA AL P L+ VL+Q VPV R +RHQ++ EA EAV
Sbjct: 142 AAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVPVRRGQRHQVLGREAPEAV 201
Query: 130 AFVLGAPGAQRAGHAQQR 147
VL R G AQQ+
Sbjct: 202 LLVL------RPGAAQQQ 213
>gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo
sapiens]
Length = 346
Score = 79.3 bits (194), Expect = 1e-15
Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 24/138 (17%)
Query: 28 AALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLG----IAGEAGGGLGLRRG 83
AALEV Q L +G EG Q LAA +A + Q A EE QL A G GLG RG
Sbjct: 147 AALEVTQQLPRRVGHLEGGQRPLAAPQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRG 206
Query: 84 AA-VAVAEGLAVAH-------------ALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAV 129
AA V VAEGLAVA AL P L+ VL+Q VPV R +RHQ++ EA EAV
Sbjct: 207 AAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVPVRRGQRHQVLGREAPEAV 266
Query: 130 AFVLGAPGAQRAGHAQQR 147
VL R G AQQ+
Sbjct: 267 LLVL------RPGAAQQQ 278
>gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo
sapiens]
Length = 346
Score = 79.3 bits (194), Expect = 1e-15
Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 24/138 (17%)
Query: 28 AALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLG----IAGEAGGGLGLRRG 83
AALEV Q L +G EG Q LAA +A + Q A EE QL A G GLG RG
Sbjct: 147 AALEVTQQLPRRVGHLEGGQRPLAAPQAGGSLQDAAEEPQLAGPLVCAAAVGIGLGRGRG 206
Query: 84 AA-VAVAEGLAVAH-------------ALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAV 129
AA V VAEGLAVA AL P L+ VL+Q VPV R +RHQ++ EA EAV
Sbjct: 207 AAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVPVRRGQRHQVLGREAPEAV 266
Query: 130 AFVLGAPGAQRAGHAQQR 147
VL R G AQQ+
Sbjct: 267 LLVL------RPGAAQQQ 278
>gi|239756669 PREDICTED: hypothetical protein [Homo sapiens]
Length = 236
Score = 35.4 bits (80), Expect = 0.017
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 17 QARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIAGEAGG 76
QA+PG+ W L+V L LA+ WQ A EA AQ+A A+ G AG A G
Sbjct: 80 QAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGAEAQRA--WARAGAAG-AEG 136
Query: 77 GLGLRRGAAVA 87
G+G G A
Sbjct: 137 GVGTGGGCGSA 147
>gi|239751161 PREDICTED: hypothetical protein XP_002347738 [Homo
sapiens]
Length = 236
Score = 35.4 bits (80), Expect = 0.017
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 17 QARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIAGEAGG 76
QA+PG+ W L+V L LA+ WQ A EA AQ+A A+ G AG A G
Sbjct: 80 QAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGAEAQRA--WARAGAAG-AEG 136
Query: 77 GLGLRRGAAVA 87
G+G G A
Sbjct: 137 GVGTGGGCGSA 147
>gi|239752797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 347
Score = 33.9 bits (76), Expect = 0.050
Identities = 34/96 (35%), Positives = 39/96 (40%), Gaps = 29/96 (30%)
Query: 51 AALEAVRAAQQAPEEAQLGIAGEAGGGLGL-RRGAAVAVAEGLAVAHALGPVLAAVLVQR 109
AA +A A Q+APEEAQ+ + GG GL R G V V V LG A
Sbjct: 143 AAAQAGSATQKAPEEAQV---AQGGGARGLGRAGGPVGVQLPREVGGTLGAAAQA----- 194
Query: 110 VPVGRLERHQLVPWEAAEAVAFVLGAPGAQRAGHAQ 145
+ AE G PGAQR HAQ
Sbjct: 195 --------------KGAE------GCPGAQRPFHAQ 210
>gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo
sapiens]
Length = 347
Score = 33.9 bits (76), Expect = 0.050
Identities = 34/96 (35%), Positives = 39/96 (40%), Gaps = 29/96 (30%)
Query: 51 AALEAVRAAQQAPEEAQLGIAGEAGGGLGL-RRGAAVAVAEGLAVAHALGPVLAAVLVQR 109
AA +A A Q+APEEAQ+ + GG GL R G V V V LG A
Sbjct: 143 AAAQAGSATQKAPEEAQV---AQGGGARGLGRAGGPVGVQLPREVGGTLGAAAQA----- 194
Query: 110 VPVGRLERHQLVPWEAAEAVAFVLGAPGAQRAGHAQ 145
+ AE G PGAQR HAQ
Sbjct: 195 --------------KGAE------GCPGAQRPFHAQ 210
>gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo
sapiens]
Length = 347
Score = 33.9 bits (76), Expect = 0.050
Identities = 34/96 (35%), Positives = 39/96 (40%), Gaps = 29/96 (30%)
Query: 51 AALEAVRAAQQAPEEAQLGIAGEAGGGLGL-RRGAAVAVAEGLAVAHALGPVLAAVLVQR 109
AA +A A Q+APEEAQ+ + GG GL R G V V V LG A
Sbjct: 143 AAAQAGSATQKAPEEAQV---AQGGGARGLGRAGGPVGVQLPREVGGTLGAAAQA----- 194
Query: 110 VPVGRLERHQLVPWEAAEAVAFVLGAPGAQRAGHAQ 145
+ AE G PGAQR HAQ
Sbjct: 195 --------------KGAE------GCPGAQRPFHAQ 210
>gi|20357578 apobec-1 complementation factor isoform 3 [Homo
sapiens]
Length = 594
Score = 31.6 bits (70), Expect = 0.25
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 68 LGIAGEAGGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGR 114
LGI + G G AA G AV +A PV AA L Q V +G+
Sbjct: 522 LGIPTDGGDGTMATAAAAATAFPGYAVPNATAPVSAAQLKQAVTLGQ 568
>gi|20357575 apobec-1 complementation factor isoform 2 [Homo
sapiens]
Length = 594
Score = 31.6 bits (70), Expect = 0.25
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 68 LGIAGEAGGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGR 114
LGI + G G AA G AV +A PV AA L Q V +G+
Sbjct: 522 LGIPTDGGDGTMATAAAAATAFPGYAVPNATAPVSAAQLKQAVTLGQ 568
>gi|20357572 apobec-1 complementation factor isoform 1 [Homo
sapiens]
Length = 586
Score = 31.6 bits (70), Expect = 0.25
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 68 LGIAGEAGGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGR 114
LGI + G G AA G AV +A PV AA L Q V +G+
Sbjct: 514 LGIPTDGGDGTMATAAAAATAFPGYAVPNATAPVSAAQLKQAVTLGQ 560
>gi|47132591 protein kinase N1 isoform 1 [Homo sapiens]
Length = 948
Score = 31.6 bits (70), Expect = 0.25
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 16 SQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAA-QQAPEEAQLGIAGEA 74
+Q P + + L E+R H +AEG + +L L A +A ++A EAQ + E+
Sbjct: 208 TQGSPDLGAVELRIEELRHHFRVEHAVAEGAKNVLRLLSAAKAPDRKAVSEAQEKLT-ES 266
Query: 75 GGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAVAFVLG 134
LGL R A L H P GRL R +L AA + AF
Sbjct: 267 NQKLGLLREALERRLGELPADH--------------PKGRLLREELA---AASSAAFSTR 309
Query: 135 APGAQRAGH 143
G A H
Sbjct: 310 LAGPFPATH 318
>gi|47132589 protein kinase N1 isoform 2 [Homo sapiens]
Length = 942
Score = 31.6 bits (70), Expect = 0.25
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 16 SQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAA-QQAPEEAQLGIAGEA 74
+Q P + + L E+R H +AEG + +L L A +A ++A EAQ + E+
Sbjct: 202 TQGSPDLGAVELRIEELRHHFRVEHAVAEGAKNVLRLLSAAKAPDRKAVSEAQEKLT-ES 260
Query: 75 GGGLGLRRGAAVAVAEGLAVAHALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAVAFVLG 134
LGL R A L H P GRL R +L AA + AF
Sbjct: 261 NQKLGLLREALERRLGELPADH--------------PKGRLLREELA---AASSAAFSTR 303
Query: 135 APGAQRAGH 143
G A H
Sbjct: 304 LAGPFPATH 312
>gi|154689769 folliculin interacting protein 2 [Homo sapiens]
Length = 1114
Score = 30.4 bits (67), Expect = 0.55
Identities = 25/60 (41%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 55 AVRAAQQAPEEAQLGIAGEAGGGLGLRRGAAVAVAEGLAVAHALGPVLAAV---LVQRVP 111
A A Q A LG A GG G RR + GL V A GPVL V VQR P
Sbjct: 806 AADIAGQLSHAADLGTASHGAGGTGGRR---LEATRGLYVKAAEGPVLEPVAPRCVQRGP 862
>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
Length = 236
Score = 30.4 bits (67), Expect = 0.55
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 59 AQQAPEEAQLG-IAGEAGGGLGLRRGAAVAVAEGLAVAHALG-PVLAAVLVQRVPVGRLE 116
A PEEA G +A GG + R +A A A A G PV AA L + GR
Sbjct: 35 APAQPEEAGEGAMAAARGGPVPAAREGRMAAARAAPAAAARGAPVAAAALARAAAAGRES 94
Query: 117 RHQLVPWEAAEA-VAFVLGAP 136
EA A VA +LG P
Sbjct: 95 PAAAAAREARMAEVARLLGEP 115
>gi|239750031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 29.6 bits (65), Expect = 0.95
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 21 GVNSAWLAALEVRQH-LAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIAGEAGGGLG 79
G+ +A AA +H + +G+A+G L L AQ+ AQ +A E G G
Sbjct: 31 GIEAAQAAAHAALEHGVIIVVGIAQGLLEALQGLLEDAEAQEGIAHAQADLASELGTCPG 90
Query: 80 LRR-GAAVAVAEGLAVAHALGPVLAAVLVQ 108
R+ A +AV +GL L ++AA VQ
Sbjct: 91 TRQPKAGLAVGDGLVKLAQL--LVAACQVQ 118
>gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo
sapiens]
Length = 401
Score = 29.6 bits (65), Expect = 0.95
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 15/117 (12%)
Query: 37 AAGLGLAEGWQALLAALEA-VRAAQQAPEEAQLGIAG-----EAGGGLGLRRGAAVAVAE 90
A+ L LA G L+ L+ + AA +E L G E G R+ A+AVAE
Sbjct: 34 ASPLTLARGHVPLVGRLQHDLGAALLQSKELVLAHLGGLARLERAAGPRRRQVTALAVAE 93
Query: 91 GLAVAHALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAVAFVLGAPGAQRAGHAQQR 147
G LA +QRV GRL P A EAV L A G +R
Sbjct: 94 GH---------LAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAVALVLEGEGDER 141
>gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo
sapiens]
Length = 356
Score = 29.6 bits (65), Expect = 0.95
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 21 GVNSAWLAALEVRQH-LAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIAGEAGGGLG 79
G+ +A AA +H + +G+A+G L L AQ+ AQ +A E G G
Sbjct: 31 GIEAAQAAAHAALEHGVIIVVGIAQGLLEALQGLLEDAEAQEGIAHAQADLASELGTCPG 90
Query: 80 LRR-GAAVAVAEGLAVAHALGPVLAAVLVQ 108
R+ A +AV +GL L ++AA VQ
Sbjct: 91 TRQPKAGLAVGDGLVKLAQL--LVAACQVQ 118
>gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo
sapiens]
Length = 401
Score = 29.6 bits (65), Expect = 0.95
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 15/117 (12%)
Query: 37 AAGLGLAEGWQALLAALEA-VRAAQQAPEEAQLGIAG-----EAGGGLGLRRGAAVAVAE 90
A+ L LA G L+ L+ + AA +E L G E G R+ A+AVAE
Sbjct: 34 ASPLTLARGHVPLVGRLQHDLGAALLQSKELVLAHLGGLARLERAAGPRRRQVTALAVAE 93
Query: 91 GLAVAHALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAVAFVLGAPGAQRAGHAQQR 147
G LA +QRV GRL P A EAV L A G +R
Sbjct: 94 GH---------LAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAVALVLEGEGDER 141
>gi|239508721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 401
Score = 29.6 bits (65), Expect = 0.95
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 15/117 (12%)
Query: 37 AAGLGLAEGWQALLAALEA-VRAAQQAPEEAQLGIAG-----EAGGGLGLRRGAAVAVAE 90
A+ L LA G L+ L+ + AA +E L G E G R+ A+AVAE
Sbjct: 34 ASPLTLARGHVPLVGRLQHDLGAALLQSKELVLAHLGGLARLERAAGPRRRQVTALAVAE 93
Query: 91 GLAVAHALGPVLAAVLVQRVPVGRLERHQLVPWEAAEAVAFVLGAPGAQRAGHAQQR 147
G LA +QRV GRL P A EAV L A G +R
Sbjct: 94 GH---------LAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAVALVLEGEGDER 141
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor
[Homo sapiens]
Length = 1336
Score = 29.6 bits (65), Expect = 0.95
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 48 ALLAALEAVRAAQQAPEEAQ-LGIAGEAGGGLGLRRGAAVAVAEG----LAVAHALGPVL 102
A + L A+ A PEEA G AG GGGLG R VA+ A A LGP +
Sbjct: 14 AKMLLLLALACASPFPEEAPGPGGAGGPGGGLGGARPLNVALVFSGPAYAAEAARLGPAV 73
Query: 103 AAVL 106
AA +
Sbjct: 74 AAAV 77
>gi|239755499 PREDICTED: hypothetical protein [Homo sapiens]
Length = 516
Score = 29.3 bits (64), Expect = 1.2
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 21 GVNSAWLAALEVRQH-LAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIAGEAGGGLG 79
G+ +A AA +H + +G+A+G L L AQ+ AQ +A E G G
Sbjct: 191 GIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQEGIAHAQADLASELGTCPG 250
Query: 80 LRR-GAAVAVAEGLAVAHALGPVLAAVLVQ 108
R+ A +AV +GL L ++AA VQ
Sbjct: 251 TRQPKAGLAVGDGLVKLAQL--LVAACQVQ 278
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 29.3 bits (64), Expect = 1.2
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 12 VRGHSQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIA 71
+R S+ARPG W AG L +ALL + AAQ++P + A
Sbjct: 16 LRTLSEARPG---DW--------ERRAGSSLCGSAEALLLSPHVTGAAQRSPTPGRARAA 64
Query: 72 GEAGGGLGLRRGAAVAVAEGLAVAHALGP 100
+ G G G RR A A + G A LGP
Sbjct: 65 PQQGDG-GARRERAAAESLGTQSA-TLGP 91
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 29.3 bits (64), Expect = 1.2
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 12 VRGHSQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIA 71
+R S+ARPG W AG L +ALL + AAQ++P + A
Sbjct: 16 LRTLSEARPG---DW--------ERRAGSSLCGSAEALLLSPHVTGAAQRSPTPGRARAA 64
Query: 72 GEAGGGLGLRRGAAVAVAEGLAVAHALGP 100
+ G G G RR A A + G A LGP
Sbjct: 65 PQQGDG-GARRERAAAESLGTQSA-TLGP 91
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 29.3 bits (64), Expect = 1.2
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 12 VRGHSQARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIA 71
+R S+ARPG W AG L +ALL + AAQ++P + A
Sbjct: 16 LRTLSEARPG---DW--------ERRAGSSLCGSAEALLLSPHVTGAAQRSPTPGRARAA 64
Query: 72 GEAGGGLGLRRGAAVAVAEGLAVAHALGP 100
+ G G G RR A A + G A LGP
Sbjct: 65 PQQGDG-GARRERAAAESLGTQSA-TLGP 91
>gi|239755583 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 31 EVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIAGEAGGGLGLRRGAAVAVAE 90
E + LAAGLG W LL R P +LG + + LGL+ G A+
Sbjct: 88 EPMESLAAGLGFPPRWSGLL------RGLHHNPRHLRLGASSHSCQLLGLKDGLGPGEAD 141
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 28.1 bits (61), Expect = 2.8
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 21/70 (30%)
Query: 34 QHLAAGL-GLA---------EGWQALLAALEAVRAAQQA-PEEAQLGI-----AGEAGGG 77
QH GL GLA E QALL V+AAQ PE L + G A G
Sbjct: 216 QHRPVGLEGLALDHDGHIAVEAQQALL-----VQAAQHCVPEVGDLDVQHLRHGGRAAAG 270
Query: 78 LGLRRGAAVA 87
LG +RGAA+A
Sbjct: 271 LGSQRGAALA 280
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 28.1 bits (61), Expect = 2.8
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 21/70 (30%)
Query: 34 QHLAAGL-GLA---------EGWQALLAALEAVRAAQQA-PEEAQLGI-----AGEAGGG 77
QH GL GLA E QALL V+AAQ PE L + G A G
Sbjct: 216 QHRPVGLEGLALDHDGHIAVEAQQALL-----VQAAQHCVPEVGDLDVQHLRHGGRAAAG 270
Query: 78 LGLRRGAAVA 87
LG +RGAA+A
Sbjct: 271 LGSQRGAALA 280
>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
Length = 457
Score = 28.1 bits (61), Expect = 2.8
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 54 EAVRAAQQAPEEAQLGIAGEAGGGLGLRRGAAVAVAEGL------AVAHALGPVLAAVLV 107
EA A +APEE G +G AG L + A AEG A G +L + L+
Sbjct: 363 EAPEAGARAPEEEAEGESGGAGATLSSAQSARAPGAEGAGSSAEGTAAAPSGCLLPSTLL 422
Query: 108 --QRVPVGRLERHQLVPW 123
+ P+G ++ PW
Sbjct: 423 PAPQGPLGTVDPQTGHPW 440
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,281,442
Number of Sequences: 37866
Number of extensions: 197207
Number of successful extensions: 851
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 812
Number of HSP's gapped (non-prelim): 59
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.