Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FNIP2 Sequence: fasta or formatted (1114aa) NCBI GI: 154689769
Description:

folliculin interacting protein 2

Referenced in:

Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         83           3
 C cysteine            2.5         28           2
 D aspartate           4.9         55           2
 E glutamate           6.8         76           2
 F phenylalanine       3.2         36           3
 G glycine             6.8         76           2
 H histidine           2.2         25           2
 I isoleucine          4.0         45           2
 K lysine              5.0         56           2
 L leucine             9.4        105           2
 M methionine          2.5         28           2
 N asparagine          3.7         41           2
 P proline             6.1         68           2
 Q glutamine           4.8         53           2
 R arginine            5.7         64           2
 S serine             11.3        126           7
 T threonine           4.6         51           2
 V valine              5.8         65           3
 W tryptophan          1.0         11           1
 Y tyrosine            2.0         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   folliculin interacting protein 2 
FNIP1                 0.296   folliculin interacting protein 1 isoform 2 
FNIP1                 0.292   folliculin interacting protein 1 isoform 1 
CDKN2AIP              0.007   CDKN2A interacting protein 
CDSN                  0.005   corneodesmosin precursor 
MED13                 0.005   mediator complex subunit 13 
MED1                  0.005   mediator complex subunit 1 
AVEN                  0.005   cell death regulator aven 
TNRC18                0.005   trinucleotide repeat containing 18 
NAV3                  0.005   neuron navigator 3 
SRRM2                 0.005   splicing coactivator subunit SRm300 
MLLT3                 0.005   myeloid/lymphoid or mixed-lineage leukemia (trithor...
LOC100133142          0.004   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.004   PREDICTED: similar to zinc finger protein 208 [Homo...
TTBK1                 0.004   tau tubulin kinase 1 
ARL6IP4               0.004   SRp25 nuclear protein isoform 1 
CHD9                  0.004   chromodomain helicase DNA binding protein 9 
RP1L1                 0.004   retinitis pigmentosa 1-like 1 
GREB1                 0.004   GREB1 protein isoform a 
BSCL2                 0.004   seipin isoform 1 
BSCL2                 0.004   seipin isoform 1 
ATN1                  0.004   atrophin-1 
ATN1                  0.004   atrophin-1 
BSCL2                 0.004   seipin isoform 2 
ARL6IP4               0.004   SRp25 nuclear protein isoform 4 
ARL6IP4               0.004   SRp25 nuclear protein isoform 3 
ARL6IP4               0.004   SRp25 nuclear protein isoform 2 
PHC2                  0.004   polyhomeotic-like 2 isoform a 
NFE2L1                0.004   nuclear factor erythroid 2-like 1 
MAGEC1                0.004   melanoma antigen family C, 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press