Guide to the Human Genome
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Name: PKN1 Sequence: fasta or formatted (948aa) NCBI GI: 47132591
Description:

protein kinase N1 isoform 1

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [942aa] protein kinase N1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         81           3
 C cysteine            1.5         14           1
 D aspartate           5.2         49           2
 E glutamate           8.6         82           3
 F phenylalanine       4.0         38           2
 G glycine             7.3         69           2
 H histidine           1.8         17           2
 I isoleucine          2.6         25           2
 K lysine              4.3         41           2
 L leucine            13.0        123           3
 M methionine          1.4         13           1
 N asparagine          2.4         23           2
 P proline             6.9         65           3
 Q glutamine           4.1         39           3
 R arginine            8.0         76           2
 S serine              7.6         72           2
 T threonine           5.4         51           2
 V valine              5.3         50           2
 W tryptophan          0.9          9           2
 Y tyrosine            1.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase N1 isoform 1 
PKN1                  0.987   protein kinase N1 isoform 2 
PKN2                  0.566   protein kinase N2 
PKN3                  0.453   protein kinase PKNbeta 
PRKCH                 0.163   protein kinase C, eta 
PRKCE                 0.161   protein kinase C, epsilon 
PRKCA                 0.160   protein kinase C, alpha 
PRKCQ                 0.159   protein kinase C, theta 
PRKCB                 0.158   protein kinase C, beta isoform 2 
PRKCG                 0.158   protein kinase C, gamma 
PRKCD                 0.158   protein kinase C, delta 
PRKCD                 0.158   protein kinase C, delta 
PRKCB                 0.157   protein kinase C, beta isoform 1 
AKT2                  0.155   AKT2 kinase 
AKT1                  0.153   AKT1 kinase 
AKT1                  0.153   AKT1 kinase 
AKT1                  0.153   AKT1 kinase 
AKT3                  0.152   AKT3 kinase isoform 1 
AKT3                  0.152   AKT3 kinase isoform 2 
PRKCI                 0.136   protein kinase C, iota 
SGK2                  0.132   serum/glucocorticoid regulated kinase 2 isoform beta...
PRKCZ                 0.132   protein kinase C, zeta isoform 2 
PRKCZ                 0.132   protein kinase C, zeta isoform 2 
PRKCZ                 0.132   protein kinase C, zeta isoform 1 
SGK2                  0.131   serum/glucocorticoid regulated kinase 2 isoform alph...
RPS6KB1               0.129   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
SGK3                  0.129   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.129   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
RPS6KB2               0.126   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
SGK1                  0.124   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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