Guide to the Human Genome
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Name: PKN1 Sequence: fasta or formatted (942aa) NCBI GI: 47132589
Description:

protein kinase N1 isoform 2

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [948aa] protein kinase N1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         81           3
 C cysteine            1.5         14           1
 D aspartate           5.3         50           2
 E glutamate           8.3         78           3
 F phenylalanine       4.0         38           2
 G glycine             7.3         69           2
 H histidine           1.8         17           2
 I isoleucine          2.7         25           2
 K lysine              4.4         41           2
 L leucine            13.0        122           3
 M methionine          1.4         13           1
 N asparagine          2.2         21           1
 P proline             6.8         64           3
 Q glutamine           4.1         39           3
 R arginine            8.1         76           2
 S serine              7.6         72           2
 T threonine           5.4         51           2
 V valine              5.4         51           2
 W tryptophan          1.0          9           2
 Y tyrosine            1.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase N1 isoform 2 
PKN1                  0.994   protein kinase N1 isoform 1 
PKN2                  0.569   protein kinase N2 
PKN3                  0.456   protein kinase PKNbeta 
PRKCH                 0.164   protein kinase C, eta 
PRKCE                 0.162   protein kinase C, epsilon 
PRKCA                 0.161   protein kinase C, alpha 
PRKCQ                 0.160   protein kinase C, theta 
PRKCB                 0.159   protein kinase C, beta isoform 2 
PRKCG                 0.159   protein kinase C, gamma 
PRKCD                 0.159   protein kinase C, delta 
PRKCD                 0.159   protein kinase C, delta 
PRKCB                 0.158   protein kinase C, beta isoform 1 
AKT2                  0.156   AKT2 kinase 
AKT1                  0.154   AKT1 kinase 
AKT1                  0.154   AKT1 kinase 
AKT1                  0.154   AKT1 kinase 
AKT3                  0.153   AKT3 kinase isoform 1 
AKT3                  0.153   AKT3 kinase isoform 2 
PRKCI                 0.136   protein kinase C, iota 
SGK2                  0.133   serum/glucocorticoid regulated kinase 2 isoform beta...
PRKCZ                 0.133   protein kinase C, zeta isoform 2 
PRKCZ                 0.133   protein kinase C, zeta isoform 2 
PRKCZ                 0.133   protein kinase C, zeta isoform 1 
SGK2                  0.132   serum/glucocorticoid regulated kinase 2 isoform alph...
RPS6KB1               0.130   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
SGK3                  0.129   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.129   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
RPS6KB2               0.127   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
SGK1                  0.125   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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