Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169162889
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169162889 PREDICTED: hypothetical protein [Homo sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169162889 PREDICTED: hypothetical protein [Homo sapiens] 348 1e-96
gi|113403785 PREDICTED: hypothetical protein [Homo sapiens] 348 1e-96
gi|113411437 PREDICTED: similar to UPF0627 protein ENSP000003581... 307 2e-84
gi|169162878 PREDICTED: hypothetical protein [Homo sapiens] 300 5e-82
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|144953895 nidogen 2 precursor [Homo sapiens] 32 0.34
gi|157909822 pragmin [Homo sapiens] 32 0.34
gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens] 31 0.44
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H... 30 0.99
gi|239747649 PREDICTED: similar to Putative uncharacterized prot... 30 0.99
gi|239747614 PREDICTED: similar to Putative uncharacterized prot... 30 0.99
gi|27734911 DAZ interacting protein 1-like [Homo sapiens] 30 0.99
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 30 1.3
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 30 1.3
gi|14589937 protocadherin 8 isoform 2 precursor [Homo sapiens] 29 1.7
gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens] 29 1.7
gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens] 29 1.7
gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens] 29 1.7
gi|223029414 HERV-H LTR-associating 1 [Homo sapiens] 28 2.9
gi|239757545 PREDICTED: hypothetical protein [Homo sapiens] 28 2.9
gi|239752059 PREDICTED: hypothetical protein XP_002348078 [Homo ... 28 2.9
gi|239746544 PREDICTED: hypothetical protein XP_002343774 [Homo ... 28 2.9
gi|188536004 zinc finger protein 469 [Homo sapiens] 28 2.9
gi|237512940 early growth response 4 [Homo sapiens] 28 2.9
gi|17978477 vacuolar protein sorting 11 [Homo sapiens] 28 2.9
gi|169210434 PREDICTED: hypothetical protein [Homo sapiens] 28 3.8
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens] 28 3.8
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ... 28 3.8
gi|215820660 ATP-binding cassette, subfamily G, member 4 [Homo s... 28 3.8
gi|20143975 ATP-binding cassette, subfamily G, member 4 [Homo sa... 28 3.8
>gi|169162889 PREDICTED: hypothetical protein [Homo sapiens]
Length = 169
Score = 348 bits (894), Expect = 1e-96
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60
MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA
Sbjct: 1 MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60
Query: 61 GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120
GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE
Sbjct: 61 GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120
Query: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169
VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA
Sbjct: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169
>gi|113403785 PREDICTED: hypothetical protein [Homo sapiens]
Length = 169
Score = 348 bits (894), Expect = 1e-96
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60
MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA
Sbjct: 1 MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60
Query: 61 GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120
GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE
Sbjct: 61 GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120
Query: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169
VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA
Sbjct: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169
>gi|113411437 PREDICTED: similar to UPF0627 protein ENSP00000358171
isoform 1 [Homo sapiens]
Length = 169
Score = 307 bits (787), Expect = 2e-84
Identities = 152/169 (89%), Positives = 156/169 (92%)
Query: 1 MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60
M SSKGLWKE+PSAHTSECFSTTACPVA ILLVWNSQTPAGLQSLCTGRHPSLSARAQ A
Sbjct: 1 MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA 60
Query: 61 GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120
GPRASREEGTFWTE VGQER LIRSGSSQNESQEDQGA LIS GLKADN+RESSTWANE
Sbjct: 61 GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE 120
Query: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169
VEDRRPQCT ALNLTPSH HPPH LTTF R+VIGI+IPPGLVA GGTVA
Sbjct: 121 VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA 169
>gi|169162878 PREDICTED: hypothetical protein [Homo sapiens]
Length = 169
Score = 300 bits (767), Expect = 5e-82
Identities = 148/169 (87%), Positives = 152/169 (89%)
Query: 1 MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60
M SKGLWKERPSAHTSECFSTTACPVAFILLVWNSQ+PAGLQS CTGRHPSLS RAQRA
Sbjct: 1 MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA 60
Query: 61 GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120
G ASREEGTFWTE VGQER LI SGSS+NESQED+GA LI GLKADNRR+SSTWANE
Sbjct: 61 GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE 120
Query: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169
VEDRRPQ TPALNLTPSHPHPP L TFLRSVIGIQIPPGLVAAGGTVA
Sbjct: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169
>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 412
Score = 33.1 bits (74), Expect = 0.12
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 117 WANEVEDRRPQCT-PALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTV 168
W + RP PAL P H HPP + ++ R + +Q PPG+ AAG +
Sbjct: 213 WPASLSPWRPYWEFPALVCFPIHEHPPRA--SWARHLDTVQTPPGVGAAGAEI 263
>gi|144953895 nidogen 2 precursor [Homo sapiens]
Length = 1375
Score = 31.6 bits (70), Expect = 0.34
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 66 REEGTFWTERVGQERWLIRSGSSQNESQED-QGAGLISQAGLKADNRRESSTWANEVEDR 124
RE +WT+ G R + R+G E +GLIS GL D+ R + W + V D+
Sbjct: 1152 RERMVYWTDVAG--RTISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMYWTDSVLDK 1209
>gi|157909822 pragmin [Homo sapiens]
Length = 1402
Score = 31.6 bits (70), Expect = 0.34
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 96 QGAGLISQAGLKADNRRESSTWANEVEDRRPQCTPALNLTPSHPHPPHSLTTFLR---SV 152
QG G + A ++ +S W + D PQ + + + +HP H T +L S
Sbjct: 438 QGQGQVCTGNAWA--QKAASGWGRDSPDPTPQVSATITVMAAHPEEDHR-TIYLSSPDSA 494
Query: 153 IGIQIPPGLVAAGGTV 168
+G+Q P G V+ V
Sbjct: 495 VGVQWPRGPVSQNSEV 510
>gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]
Length = 479
Score = 31.2 bits (69), Expect = 0.44
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 105 GLKADNRRESSTWANEVEDRRPQCTPALNLTPS-HPHPPHSLTTFLRSVIGIQIPP 159
G + +R + EV R C PAL L P HPHP + +FL + Q+PP
Sbjct: 308 GRQLPSRTTPTLGLEEVLSSR-DCHPALPLPPGFHPHPGPNYPSFLPDQMQPQVPP 362
>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 541
Score = 30.0 bits (66), Expect = 0.99
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 35 NSQTPAGLQSLCTGRHPSLSARAQRAGPRASREEGTFWTERVGQERWLIRSG-----SSQ 89
+ Q PAG QS GR + R R+G G ER G WL SG +SQ
Sbjct: 57 SEQAPAGPQS-DRGRPGQVPDRCLRSGRERGSRSGPGPAERGGGGSWLQESGCVRDCNSQ 115
Query: 90 NESQEDQGAGLISQA 104
+ DQ L S A
Sbjct: 116 HTFLSDQAPSLKSSA 130
>gi|239747649 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 237
Score = 30.0 bits (66), Expect = 0.99
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 22 TTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRAGP 62
T A P + L W+ Q P GL+S+ + R PSL A AGP
Sbjct: 87 TVASPGSAPALRWHLQAPNGLRSVGSSR-PSLGLLAASAGP 126
>gi|239747614 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 259
Score = 30.0 bits (66), Expect = 0.99
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 22 TTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRAGP 62
T A P + L W+ Q P GL+S+ + R PSL A AGP
Sbjct: 88 TVASPGSAPALRWHLQAPNGLRSVGSSR-PSLGLLAASAGP 127
>gi|27734911 DAZ interacting protein 1-like [Homo sapiens]
Length = 767
Score = 30.0 bits (66), Expect = 0.99
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 44 SLCTGRHPSLSARAQRAGPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQ 103
S+ T RH R QR ++ ++E + L++ +S+ + +++ GA +
Sbjct: 480 SIQTLRHLESLLRVQR------EQKARKFSEFLSLRGKLVKEVTSRAKERQENGAAVSQP 533
Query: 104 AGLKADNRRESSTWANEVEDRRPQCTPALNLTPSHPHPP 142
G + ++S+ E + + AL TP+ P PP
Sbjct: 534 DGQPSVKSQQSALVTREAQPKTRTLQVALPSTPAEPPPP 572
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 29.6 bits (65), Expect = 1.3
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 56 RAQRAGPRASREEGTFWTERVGQE-------RWLIRSGSSQNESQEDQGAGLISQAGLKA 108
R +R+ R S E W +R G +W R GSSQ++S E+Q G ++ +A
Sbjct: 48 RRRRSRERRSDSEEERW-QRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRA 106
Query: 109 DNRRESSTWANEVEDRRPQ 127
+ SS+ ++ R Q
Sbjct: 107 RSWSPSSSASSSASPGRSQ 125
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 29.6 bits (65), Expect = 1.3
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 56 RAQRAGPRASREEGTFWTERVGQE-------RWLIRSGSSQNESQEDQGAGLISQAGLKA 108
R +R+ R S E W +R G +W R GSSQ++S E+Q G ++ +A
Sbjct: 48 RRRRSRERRSDSEEERW-QRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRA 106
Query: 109 DNRRESSTWANEVEDRRPQ 127
+ SS+ ++ R Q
Sbjct: 107 RSWSPSSSASSSASPGRSQ 125
>gi|14589937 protocadherin 8 isoform 2 precursor [Homo sapiens]
Length = 973
Score = 29.3 bits (64), Expect = 1.7
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 18/79 (22%)
Query: 84 RSGSSQNESQEDQGAGLISQAGLKAD--NRRESSTWANEVE-------DR--RPQCTPAL 132
+ S N+S D IS LK D N +S WA E DR P C+
Sbjct: 822 KGDSDFNDSDSD-----ISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCSGP- 875
Query: 133 NLTPSHPHPPHSLTTFLRS 151
N PS PHPP ++TF +S
Sbjct: 876 NAHPS-PHPPAQMSTFCKS 893
>gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens]
Length = 1070
Score = 29.3 bits (64), Expect = 1.7
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 18/79 (22%)
Query: 84 RSGSSQNESQEDQGAGLISQAGLKAD--NRRESSTWANEVE-------DR--RPQCTPAL 132
+ S N+S D IS LK D N +S WA E DR P C+
Sbjct: 919 KGDSDFNDSDSD-----ISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCSGP- 972
Query: 133 NLTPSHPHPPHSLTTFLRS 151
N PS PHPP ++TF +S
Sbjct: 973 NAHPS-PHPPAQMSTFCKS 990
>gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens]
Length = 518
Score = 29.3 bits (64), Expect = 1.7
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Query: 67 EEGTFWTERVGQERWLIRSGSSQNESQE---DQGAGLISQAGLKADNRRESSTWANEVED 123
EEG FWT + + W + E +E D G + + L+ ++ + EVE+
Sbjct: 103 EEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEE 162
Query: 124 RRPQCTPALNLTPSHPHPP 142
+L P P PP
Sbjct: 163 E--------DLDPVTPLPP 173
>gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens]
Length = 630
Score = 29.3 bits (64), Expect = 1.7
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Query: 67 EEGTFWTERVGQERWLIRSGSSQNESQE---DQGAGLISQAGLKADNRRESSTWANEVED 123
EEG FWT + + W + E +E D G + + L+ ++ + EVE+
Sbjct: 103 EEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEE 162
Query: 124 RRPQCTPALNLTPSHPHPP 142
+L P P PP
Sbjct: 163 E--------DLDPVTPLPP 173
>gi|223029414 HERV-H LTR-associating 1 [Homo sapiens]
Length = 531
Score = 28.5 bits (62), Expect = 2.9
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 3 SSKGLWKERP---SAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQR 59
+S G W + SA S ++ TA P S+T ++L TGR P L ARA
Sbjct: 249 TSPGHWTQSTPWASALRSSPWTETAAP---------SETE---ETLNTGRPPELPARATA 296
Query: 60 AGPRASREEGTFWTERVGQERWL 82
AS T RV + +WL
Sbjct: 297 TWFSASHTLPALATRRVARTQWL 319
>gi|239757545 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 28.5 bits (62), Expect = 2.9
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 21 STTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRAGPRASREEGTFWTERVGQER 80
S + PV LLV + P G + G ++ ARA+ AGPRA W R R
Sbjct: 58 SGSLLPVCPALLVPVLRLPVGHPGIRAG--VNIQARAEAAGPRA-------WAGR--GSR 106
Query: 81 WLIRSGSSQNESQEDQGAGLISQAGLKAD 109
+ + ++ D G L+ + GL+A+
Sbjct: 107 QPLEPDAEVAAAEVDVGTVLLEEGGLQAE 135
>gi|239752059 PREDICTED: hypothetical protein XP_002348078 [Homo
sapiens]
Length = 145
Score = 28.5 bits (62), Expect = 2.9
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 21 STTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRAGPRASREEGTFWTERVGQER 80
S + PV LLV + P G + G ++ ARA+ AGPRA W R R
Sbjct: 58 SGSLLPVCPALLVPVLRLPVGHPGIRAG--VNIQARAEAAGPRA-------WAGR--GSR 106
Query: 81 WLIRSGSSQNESQEDQGAGLISQAGLKAD 109
+ + ++ D G L+ + GL+A+
Sbjct: 107 QPLEPDAEVAAAEVDVGTVLLEEGGLQAE 135
>gi|239746544 PREDICTED: hypothetical protein XP_002343774 [Homo
sapiens]
Length = 145
Score = 28.5 bits (62), Expect = 2.9
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 21 STTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRAGPRASREEGTFWTERVGQER 80
S + PV LLV + P G + G ++ ARA+ AGPRA W R R
Sbjct: 58 SGSLLPVCPALLVPVLRLPVGHPGIRAG--VNIQARAEAAGPRA-------WAGR--GSR 106
Query: 81 WLIRSGSSQNESQEDQGAGLISQAGLKAD 109
+ + ++ D G L+ + GL+A+
Sbjct: 107 QPLEPDAEVAAAEVDVGTVLLEEGGLQAE 135
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 28.5 bits (62), Expect = 2.9
Identities = 24/102 (23%), Positives = 37/102 (36%), Gaps = 12/102 (11%)
Query: 36 SQTPAGLQSLCTGRHPSLSARAQRAGPRASREEGTFWTERVGQERWLIRSGSSQNESQED 95
+Q P G + LC GR + Q G + + G FW R + + + S E ED
Sbjct: 2693 AQKPPGDRMLCPGRMDGAALGEQPTGQKGASARG-FWGPRETKALGVCKESGS--EPAED 2749
Query: 96 QGAGLISQAGLKADNRRESSTWANEVEDRRPQCTPALNLTPS 137
+A +R E W P P + +P+
Sbjct: 2750 SS---------RAHSRSEEGVWEENTPPLGPLGFPETSSSPA 2782
>gi|237512940 early growth response 4 [Homo sapiens]
Length = 589
Score = 28.5 bits (62), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 132 LNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAA 164
+ P HPH P +L + ++G+ PG AA
Sbjct: 191 IQAVPEHPHDPEALFNLMSGILGLAPFPGPEAA 223
>gi|17978477 vacuolar protein sorting 11 [Homo sapiens]
Length = 941
Score = 28.5 bits (62), Expect = 2.9
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 37 QTPAGLQSLCTGRHPSLSARAQRAGP--RASREE 68
QT L+ LCT PSL R+ R P RA+ EE
Sbjct: 559 QTTQLLKGLCTDYRPSLEGRSDREAPGCRANSEE 592
>gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 301
Score = 28.1 bits (61), Expect = 3.8
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 20/132 (15%)
Query: 39 PAGLQSLCTGRHPSLSARAQRAGPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGA 98
P G SL + HP+ AR GP +R E ER G ++ + + +GA
Sbjct: 42 PPGRPSLRSDSHPTQRARRAGEGPARARLE----AERAGCAHGPGAPARTRAHAHKGRGA 97
Query: 99 G-LISQAGLKADNRRESSTWANEVEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQI 157
G L+ QA +A + E+ R PA LTP S+ + R+ +
Sbjct: 98 GKLVIQARTRAQK-------GGKGEETRRGPAPA-GLTP-------SVCLYGRAPTASRT 142
Query: 158 PPGLVAAGGTVA 169
PG A G A
Sbjct: 143 GPGAPAEGARAA 154
>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 446
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 132 LNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTV 168
L L+ H HPP + ++ R + +Q PPG+ AAG +
Sbjct: 263 LYLSLLHQHPPRA--SWARHLDTVQTPPGVGAAGAEI 297
>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
sapiens]
Length = 487
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 132 LNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTV 168
L L+ H HPP + ++ R + +Q PPG+ AAG +
Sbjct: 263 LYLSLLHQHPPRA--SWARHLDTVQTPPGVGAAGAEI 297
>gi|215820660 ATP-binding cassette, subfamily G, member 4 [Homo
sapiens]
Length = 646
Score = 28.1 bits (61), Expect = 3.8
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 103 QAGLKADNRRESSTWANEVEDRRPQCTPALNLTPSHPHPPHSLTTF 148
Q GL A ++SS NEV P C P ++ SH +LT F
Sbjct: 329 QNGLCAMAEKKSSPEKNEVPAPCPPCPPEVDPIESHTFATSTLTQF 374
>gi|20143975 ATP-binding cassette, subfamily G, member 4 [Homo
sapiens]
Length = 646
Score = 28.1 bits (61), Expect = 3.8
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 103 QAGLKADNRRESSTWANEVEDRRPQCTPALNLTPSHPHPPHSLTTF 148
Q GL A ++SS NEV P C P ++ SH +LT F
Sbjct: 329 QNGLCAMAEKKSSPEKNEVPAPCPPCPPEVDPIESHTFATSTLTQF 374
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,738,834
Number of Sequences: 37866
Number of extensions: 351701
Number of successful extensions: 1287
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1258
Number of HSP's gapped (non-prelim): 69
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.