Guide to the Human Genome
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Name: LOC729660 Sequence: fasta or formatted (237aa) NCBI GI: 239747649
Description:

PREDICTED: similar to Putative uncharacterized protein FLJ44672

Not currently referenced in the text

Other entries for this name:
alt prot {161aa} PREDICTED: similar to Putative uncharacterized protein FLJ44672
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         30           2
 C cysteine            0.8          2           1
 D aspartate           1.7          4           1
 E glutamate           2.1          5           2
 F phenylalanine       1.7          4           1
 G glycine             9.7         23           2
 H histidine           0.8          2           1
 I isoleucine          0.4          1           1
 K lysine              0.8          2           1
 L leucine            12.2         29           2
 M methionine          0.4          1           1
 N asparagine          0.8          2           1
 P proline            17.3         41           2
 Q glutamine           5.9         14           2
 R arginine            7.2         17           2
 S serine             15.6         37           3
 T threonine           2.1          5           2
 V valine              5.1         12           1
 W tryptophan          1.3          3           1
 X unknown             1.3          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Putative uncharacterized prot... 
LOC731275             0.876   PREDICTED: similar to Putative uncharacterized prot...
LOC729660             0.354   PREDICTED: similar to Putative uncharacterized prot...
LOC100287930          0.144   PREDICTED: hypothetical protein XP_002342772 
LOC100287930          0.144   PREDICTED: similar to Putative uncharacterized prot...
LOC100287930          0.144   PREDICTED: similar to Putative uncharacterized prot...
LOC729737             0.113   PREDICTED: hypothetical protein 
LOC100292804          0.111   PREDICTED: similar to hCG1739112 
LOC100289693          0.111   PREDICTED: hypothetical protein XP_002347909 
LOC100294359          0.108   PREDICTED: hypothetical protein 
LOC100134105          0.106   PREDICTED: similar to hCG1793472 
LOC728417             0.095   PREDICTED: hypothetical protein 
LOC728417             0.095   PREDICTED: hypothetical protein 
LOC728417             0.095   PREDICTED: hypothetical protein isoform 2 
LOC728417             0.095   PREDICTED: hypothetical protein isoform 1 
LOC100131871          0.090   PREDICTED: similar to hCG1779533 
LOC731275             0.090   PREDICTED: hypothetical protein 
LOC100131871          0.090   PREDICTED: similar to hCG1779533 
LOC100132062          0.090   PREDICTED: hypothetical protein 
LOC100132287          0.090   PREDICTED: hypothetical protein 
LOC100131871          0.090   PREDICTED: similar to hCG1779533 
LOC100129904          0.088   PREDICTED: hypothetical protein 
LOC100129904          0.088   PREDICTED: hypothetical protein 
LOC100288360          0.088   PREDICTED: hypothetical protein XP_002342802 
LOC100129904          0.088   PREDICTED: hypothetical protein 
LOC100288360          0.088   PREDICTED: similar to Putative uncharacterized prot...
LOC100129904          0.088   PREDICTED: hypothetical protein 
LOC100132062          0.088   PREDICTED: hypothetical protein 
LOC100133161          0.086   PREDICTED: hypothetical protein 
LOC100293878          0.079   PREDICTED: similar to hCG1779533 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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