Guide to the Human Genome
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Name: C19orf29 Sequence: fasta or formatted (758aa) NCBI GI: 122937392
Description:

chromosome 19 open reading frame 29

Not currently referenced in the text

Other entries for this name:
alt mRNA {758aa} chromosome 19 open reading frame 29
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         51           5
 C cysteine            0.3          2           1
 D aspartate           6.1         46           3
 E glutamate          11.2         85           3
 F phenylalanine       3.7         28           2
 G glycine             6.9         52           2
 H histidine           2.1         16           1
 I isoleucine          3.0         23           1
 K lysine              6.2         47           2
 L leucine             7.8         59           2
 M methionine          2.1         16           1
 N asparagine          2.9         22           2
 P proline             4.7         36           3
 Q glutamine           6.3         48           3
 R arginine           12.5         95           7
 S serine              7.7         58           3
 T threonine           2.8         21           2
 V valine              2.5         19           1
 W tryptophan          1.7         13           1
 Y tyrosine            2.8         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 19 open reading frame 29 
C19orf29              1.000   chromosome 19 open reading frame 29 
SFRS4                 0.036   splicing factor, arginine/serine-rich 4 
TCHH                  0.034   trichohyalin 
LOC100133599          0.033   PREDICTED: hypothetical protein 
SFRS11                0.033   splicing factor, arginine/serine-rich 11 
LOC100286959          0.033   PREDICTED: hypothetical protein XP_002343921 
ZC3H13                0.032   zinc finger CCCH-type containing 13 
DDX46                 0.031   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
RBM25                 0.031   RNA binding motif protein 25 
BCLAF1                0.031   BCL2-associated transcription factor 1 isoform 2 [H...
LOC731605             0.030   PREDICTED: similar to BCL2-associated transcription...
LOC283685             0.030   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC645202             0.030   PREDICTED: hypothetical protein LOC645202 
BCLAF1                0.030   BCL2-associated transcription factor 1 isoform 3 [H...
BCLAF1                0.030   BCL2-associated transcription factor 1 isoform 1 [Hom...
LOC283685             0.030   PREDICTED: golgi autoantigen, golgin subfamily a-li...
SRRM2                 0.030   splicing coactivator subunit SRm300 
LOC100131202          0.030   PREDICTED: hypothetical protein 
ARGLU1                0.030   arginine and glutamate rich 1 
LOC731605             0.029   PREDICTED: similar to BCL2-associated transcription...
LOC100170229          0.029   hypothetical protein LOC100170229 
SFRS16                0.029   splicing factor, arginine/serine-rich 16 
SFRS12                0.028   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.028   splicing factor, arginine/serine-rich 12 isoform b [...
LOC283767             0.028   golgi autoantigen, golgin subfamily a-like 
DDX23                 0.028   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
PHRF1                 0.026   PHD and ring finger domains 1 
LOC100133599          0.026   PREDICTED: hypothetical protein 
RSRC2                 0.026   arginine/serine-rich coiled-coil 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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