PCDH8 4182

Name: PCDH8	Sequence: fasta or formatted (973aa)		NCBI GI: 14589937
Description: protocadherin 8 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1070aa] protocadherin 8 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.9 116 8 C cysteine 1.4 14 1 D aspartate 6.8 66 1 E glutamate 5.5 54 2 F phenylalanine 2.8 27 1 G glycine 8.5 83 3 H histidine 1.5 15 1 I isoleucine 2.5 24 2 K lysine 2.1 20 2 L leucine 9.5 92 3 M methionine 0.5 5 1 N asparagine 2.6 25 2 P proline 8.2 80 2 Q glutamine 4.0 39 3 R arginine 8.0 78 2 S serine 7.5 73 3 T threonine 5.0 49 3 V valine 8.7 85 2 W tryptophan 0.6 6 1 Y tyrosine 2.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 8 isoform 2 precursor PCDH8 0.930 protocadherin 8 isoform 1 precursor PCDH18 0.274 protocadherin 18 precursor PCDH10 0.252 protocadherin 10 isoform 1 precursor PCDH10 0.252 protocadherin 10 isoform 2 precursor PCDH17 0.232 protocadherin 17 precursor PCDH19 0.232 protocadherin 19 isoform a PCDH19 0.232 protocadherin 19 isoform b PCDHAC2 0.221 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.221 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDH12 0.220 protocadherin 12 precursor PCDHGC4 0.217 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHGC4 0.217 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHA13 0.214 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.214 protocadherin alpha 13 isoform 1 precursor PCDHA8 0.213 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.213 protocadherin alpha 8 isoform 1 precursor PCDHA2 0.210 protocadherin alpha 2 isoform 2 precursor PCDHA2 0.210 protocadherin alpha 2 isoform 1 precursor PCDHA5 0.210 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.210 protocadherin alpha 5 isoform 2 precursor PCDHGA12 0.208 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.208 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHA1 0.208 protocadherin alpha 1 isoform 2 precursor PCDHA1 0.208 protocadherin alpha 1 isoform 1 precursor PCDHA10 0.207 protocadherin alpha 10 isoform 2 precursor PCDHA10 0.207 protocadherin alpha 10 isoform 1 precursor PCDHA6 0.207 protocadherin alpha 6 isoform 2 precursor PCDHA6 0.207 protocadherin alpha 6 isoform 1 precursor PCDHGA4 0.207 protocadherin gamma subfamily A, 4 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.