Search of human proteins with 169162103

Search of human proteins with 169162103

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169162103 PREDICTED: hypothetical protein LOC400743 [Homo
sapiens]
         (190 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169161039 PREDICTED: hypothetical protein LOC400743 [Homo sap...   392   e-109
gi|169162103 PREDICTED: hypothetical protein LOC400743 [Homo sap...   392   e-109
gi|169162790 PREDICTED: hypothetical protein LOC400743 [Homo sap...   390   e-109
gi|148833504 interleukin 16 isoform 2 [Homo sapiens]                   32   0.25 
gi|54873613 agrin [Homo sapiens]                                       32   0.33 
gi|239744155 PREDICTED: hypothetical protein XP_002343067 [Homo ...    31   0.56 
gi|239755357 PREDICTED: similar to hCG2039035 [Homo sapiens]           30   0.96 
gi|239749854 PREDICTED: hypothetical protein XP_002347188 [Homo ...    30   0.96 
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ...    30   0.96 
gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens]    29   2.1  
gi|119220552 sidekick 1 [Homo sapiens]                                 29   2.8  
gi|239750721 PREDICTED: hypothetical protein, partial [Homo sapi...    29   2.8  
gi|61102725 la related protein isoform 2 [Homo sapiens]                29   2.8  
gi|39725634 la related protein isoform 1 [Homo sapiens]                29   2.8  
gi|46409370 olfactory receptor, family 10, subfamily W, member 1...    29   2.8  
gi|24475869 cellular repressor of E1A-stimulated genes 2 [Homo s...    28   3.6  
gi|168823443 RAD54-like 2 [Homo sapiens]                               28   3.6  
gi|194306623 immunoglobulin superfamily containing leucine-rich ...    28   3.6  
gi|194306621 immunoglobulin superfamily containing leucine-rich ...    28   3.6  
gi|39930401 immunoglobulin superfamily containing leucine-rich r...    28   3.6  
gi|194306618 immunoglobulin superfamily containing leucine-rich ...    28   3.6  
gi|112734870 hypothetical protein LOC57648 [Homo sapiens]              28   3.6  
gi|153792074 proline rich 12 [Homo sapiens]                            28   3.6  
gi|239756297 PREDICTED: hypothetical protein [Homo sapiens]            28   4.8  
gi|88957790 PREDICTED: hypothetical protein LOC389043 [Homo sapi...    28   4.8  
gi|28559039 mediator complex subunit 1 [Homo sapiens]                  28   4.8  
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       28   4.8  
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       28   4.8  
gi|225637489 hypothetical protein LOC54777 [Homo sapiens]              28   6.2  
gi|215272321 chemokine-like receptor 1 isoform a [Homo sapiens]        28   6.2  

>gi|169161039 PREDICTED: hypothetical protein LOC400743 [Homo
           sapiens]
          Length = 190

 Score =  392 bits (1007), Expect = e-109
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS 60
           MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS
Sbjct: 1   MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS 60

Query: 61  LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLCPLHSHSP 120
           LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLCPLHSHSP
Sbjct: 61  LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLCPLHSHSP 120

Query: 121 PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW 180
           PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW
Sbjct: 121 PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW 180

Query: 181 GLLASCGMGG 190
           GLLASCGMGG
Sbjct: 181 GLLASCGMGG 190


>gi|169162103 PREDICTED: hypothetical protein LOC400743 [Homo
           sapiens]
          Length = 190

 Score =  392 bits (1007), Expect = e-109
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS 60
           MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS
Sbjct: 1   MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS 60

Query: 61  LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLCPLHSHSP 120
           LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLCPLHSHSP
Sbjct: 61  LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLCPLHSHSP 120

Query: 121 PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW 180
           PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW
Sbjct: 121 PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW 180

Query: 181 GLLASCGMGG 190
           GLLASCGMGG
Sbjct: 181 GLLASCGMGG 190


>gi|169162790 PREDICTED: hypothetical protein LOC400743 [Homo
           sapiens]
          Length = 190

 Score =  390 bits (1002), Expect = e-109
 Identities = 189/190 (99%), Positives = 189/190 (99%)

Query: 1   MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS 60
           MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS
Sbjct: 1   MWKVEREHMGSGASGLLGSVLPVWELSPALPCSVSVSLRSVPPSVLQFFPLHLSLWLSQS 60

Query: 61  LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLCPLHSHSP 120
           LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSV VSLFFSLLLSVSVHFSVCLCPLHSHSP
Sbjct: 61  LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVCVSLFFSLLLSVSVHFSVCLCPLHSHSP 120

Query: 121 PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW 180
           PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW
Sbjct: 121 PMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKILFPGKGMW 180

Query: 181 GLLASCGMGG 190
           GLLASCGMGG
Sbjct: 181 GLLASCGMGG 190


>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
          Length = 1332

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 15/28 (53%), Positives = 16/28 (57%)

Query: 142 EEAGAPPSDDARCPSQGSGGQTKSSARG 169
           + AG  PS  A CP  G G QTKSS  G
Sbjct: 648 DTAGRSPSASAGCPGPGIGPQTKSSTEG 675


>gi|54873613 agrin [Homo sapiens]
          Length = 2045

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 111 CLCPLHSHSPP--MLSSLGAPLASLGHRPRLGC------EEAGAPPSDDARCPSQGSG 160
           C+CP   H PP  +  S G    S        C      EEA A P + A C S GSG
Sbjct: 618 CVCPRCEHPPPGPVCGSDGVTYGSACELREAACLQQTQIEEARAGPCEQAECGSGGSG 675


>gi|239744155 PREDICTED: hypothetical protein XP_002343067 [Homo
           sapiens]
          Length = 112

 Score = 31.2 bits (69), Expect = 0.56
 Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 47  QFFPLHLSLWLSQSLFAPHCLCLSL--HLSSFPGLSLSLS-SLFWAFSVSVSLFFSLLLS 103
           Q FP+ + + L +S  + H    SL     S+P L +    +LFW    +  L FS LLS
Sbjct: 9   QAFPVAVFMTLLRSSNSSHVWNHSLPDRRISWPQLMICTKPNLFWGTHQASGLTFSALLS 68

Query: 104 VSVHFSVCLCPLHSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDA 152
           + +     L     H    LS  G+P  S G  PR    EA     DD+
Sbjct: 69  LPICPGFLLVSTTGH----LSEAGSPPGSCGLLPR-AWREAAPTLEDDS 112


>gi|239755357 PREDICTED: similar to hCG2039035 [Homo sapiens]
          Length = 112

 Score = 30.4 bits (67), Expect = 0.96
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 47  QFFPLHLSLWLSQSLFAPHCLCLSL--HLSSFPGLSLSLS-SLFWAFSVSVSLFFSLLLS 103
           Q FP+ + + L +S    H    SL     S+P L +    +LFW    +  L FS LLS
Sbjct: 9   QAFPVAVFMTLLRSSNPSHVWNHSLPDRRISWPQLMICTKPNLFWGTHQASGLTFSALLS 68

Query: 104 VSVHFSVCLCPLHSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDA 152
           + +     L     H    LS  G+P  S G  PR    EA     DD+
Sbjct: 69  LPICPGFLLVSTTGH----LSEAGSPPGSCGLLPR-AWREAAPTLEDDS 112


>gi|239749854 PREDICTED: hypothetical protein XP_002347188 [Homo
           sapiens]
          Length = 112

 Score = 30.4 bits (67), Expect = 0.96
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 47  QFFPLHLSLWLSQSLFAPHCLCLSL--HLSSFPGLSLSLS-SLFWAFSVSVSLFFSLLLS 103
           Q FP+ + + L +S    H    SL     S+P L +    +LFW    +  L FS LLS
Sbjct: 9   QAFPVAVFMTLLRSSNPSHVWNHSLPDRRISWPQLMICTKPNLFWGTHQASGLTFSALLS 68

Query: 104 VSVHFSVCLCPLHSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDA 152
           + +     L     H    LS  G+P  S G  PR    EA     DD+
Sbjct: 69  LPICPGFLLVSTTGH----LSEAGSPPGSCGLLPR-AWREAAPTLEDDS 112


>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
           sapiens]
          Length = 756

 Score = 30.4 bits (67), Expect = 0.96
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 113 CPLHSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGG-QTKSSARG 169
           C L  H+P +L  L  P A+L  RP L  +    P    +R P Q  GG Q + ++RG
Sbjct: 297 CLLAEHNPGVLPQL--PTAALESRPGLEPQSQPKPAKYQSRGPPQLPGGIQQRQASRG 352


>gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens]
          Length = 655

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)

Query: 138 RLGCEEAGAPPSDDARCPSQGSGGQTKSSARGG 170
           R+G EE G PP  D   P    GGQ ++ A GG
Sbjct: 246 RIGGEEGGRPPEADDPVP----GGQARNGAGGG 274


>gi|119220552 sidekick 1 [Homo sapiens]
          Length = 2213

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 120 PPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSAR-GGK---ILFP 175
           PP  +  G P  S   R R        P     R   + SGG T  + R GG+    L P
Sbjct: 19  PPERAGPGRPRGSPPGRARPSLAPRPGPEPSRPRAAPETSGGDTAGAGRCGGRRAAKLGP 78

Query: 176 G-KGMWGLLA 184
           G +G W LLA
Sbjct: 79  GRRGWWALLA 88


>gi|239750721 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 230

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 31  PCSVSVSLRSVPPSVLQFFPLHLSLWLSQSLFAPHCLCLSLHLSSFPGLSLSLSSLFWAF 90
           PC       S+ PS+     L + L +  S+ A   L  S+H S  P +   + +     
Sbjct: 49  PCIHPPICSSIHPSIHPSTYLFIHLSMHPSIHASIHLHPSIHPSIHPSIHTYMHT----- 103

Query: 91  SVSVSLFFSLLLSVSVHFSVCLCPLHSHSPPMLSSLGAPL 130
             S  LF  L +  S+H    +CP  S  P + SS+ A +
Sbjct: 104 --STYLFIHLSMHPSIHIHPSICP--SIHPSIHSSIHASI 139



 Score = 27.7 bits (60), Expect = 6.2
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 26  LSPALPCSVSVSLR-SVPPSV-LQFFP-LHLSLWLSQSLFAPHCLCLSLHLSSFPGLSLS 82
           + P++  S+  S+  SV PS      P +H S+  S  LF    +  S+H S  P +  S
Sbjct: 127 IHPSIHSSIHASIHLSVHPSFHASIHPCIHPSMHPSTYLFIHPSMHPSIHASIHPPICSS 186

Query: 83  LSSLFWAFSVSVSLFFSLLLSV--SVHFSV 110
           +  LF   S+  S+  S+ LSV  S+H S+
Sbjct: 187 IFPLFIHPSLYPSIHASIHLSVHPSIHPSI 216


>gi|61102725 la related protein isoform 2 [Homo sapiens]
          Length = 1096

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 116 HSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSS 166
           HS +PP+ S +G  + S  HRPR     A    S     P+ GS G T  S
Sbjct: 822 HSSNPPLESHVGWVMDSREHRPR----TASISSSPSEGTPTVGSYGCTPQS 868


>gi|39725634 la related protein isoform 1 [Homo sapiens]
          Length = 1019

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 116 HSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSS 166
           HS +PP+ S +G  + S  HRPR     A    S     P+ GS G T  S
Sbjct: 745 HSSNPPLESHVGWVMDSREHRPR----TASISSSPSEGTPTVGSYGCTPQS 791


>gi|46409370 olfactory receptor, family 10, subfamily W, member 1
           [Homo sapiens]
          Length = 305

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 9/53 (16%)

Query: 61  LFAPHCLCLSLHLSSFPGLSLSLSSLFWAFSVSVSLFFSLLLSVSVHFSVCLC 113
           +F  +  C  LH+ SF G+SL    +            ++L+ VS+H   CLC
Sbjct: 4   VFLAYPSCPELHILSFLGVSLVYGLIITG---------NILIVVSIHTETCLC 47


>gi|24475869 cellular repressor of E1A-stimulated genes 2 [Homo
           sapiens]
          Length = 290

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 136 RPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARGGKI------LFPGKGMWGLLAS 185
           RPR G   A  PP+       +  GGQT S+  G ++            +WG LA+
Sbjct: 86  RPRAGAARARPPPAPPGMFSYRREGGQTASAPPGPRLRAATARSLAHASVWGCLAT 141


>gi|168823443 RAD54-like 2 [Homo sapiens]
          Length = 1467

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 108 FSVCLCPLHSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSS 166
           F VC C + +H   +  +L     SL +   L  EE G+  +  ARCP QG+ G+ + S
Sbjct: 615 FCVC-CKIWNHPDVLYEALQKE--SLANEQDLDVEELGSAGTS-ARCPPQGTKGKGEDS 669


>gi|194306623 immunoglobulin superfamily containing leucine-rich
           repeat 2 [Homo sapiens]
          Length = 745

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 110 VCLCPLHSHSPPMLSSLGAPLASLG---HRPRLGCEEAGAPPSDDARCPSQGSGGQTKSS 166
           V  C  H+      +S+   +A+ G   H P  G E  G  P+ + +  ++G G     S
Sbjct: 352 VYTCRAHNELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPS 411

Query: 167 ARGGKILFPGKGM 179
              GKI   G+G+
Sbjct: 412 KPEGKI--KGQGL 422


>gi|194306621 immunoglobulin superfamily containing leucine-rich
           repeat 2 [Homo sapiens]
          Length = 745

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 110 VCLCPLHSHSPPMLSSLGAPLASLG---HRPRLGCEEAGAPPSDDARCPSQGSGGQTKSS 166
           V  C  H+      +S+   +A+ G   H P  G E  G  P+ + +  ++G G     S
Sbjct: 352 VYTCRAHNELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPS 411

Query: 167 ARGGKILFPGKGM 179
              GKI   G+G+
Sbjct: 412 KPEGKI--KGQGL 422


>gi|39930401 immunoglobulin superfamily containing leucine-rich
           repeat 2 [Homo sapiens]
          Length = 745

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 110 VCLCPLHSHSPPMLSSLGAPLASLG---HRPRLGCEEAGAPPSDDARCPSQGSGGQTKSS 166
           V  C  H+      +S+   +A+ G   H P  G E  G  P+ + +  ++G G     S
Sbjct: 352 VYTCRAHNELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPS 411

Query: 167 ARGGKILFPGKGM 179
              GKI   G+G+
Sbjct: 412 KPEGKI--KGQGL 422


>gi|194306618 immunoglobulin superfamily containing leucine-rich
           repeat 2 [Homo sapiens]
          Length = 745

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 110 VCLCPLHSHSPPMLSSLGAPLASLG---HRPRLGCEEAGAPPSDDARCPSQGSGGQTKSS 166
           V  C  H+      +S+   +A+ G   H P  G E  G  P+ + +  ++G G     S
Sbjct: 352 VYTCRAHNELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPS 411

Query: 167 ARGGKILFPGKGM 179
              GKI   G+G+
Sbjct: 412 KPEGKI--KGQGL 422


>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
          Length = 1094

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 119 SPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCP 155
           +P   SS    +A L  +  +GC + G PP +D   P
Sbjct: 841 APAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAP 877


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 114 PLHSHSPPMLSSLGAPLASLGHRPRLGCEE-AGAPPSDDARCPSQGSGGQTKSSARG 169
           P  +H+     S G    S+GHR  L C    G  PS  A  PS+       + A G
Sbjct: 304 PPPAHALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGASG 360


>gi|239756297 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 525

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 16/69 (23%)

Query: 113 CPLHSHSPPML-SSLGAPLASLGHRPRLGCEEAGAP--PSDDARCPS--------QGSGG 161
           C + S SPP+L SSLG P       P  G  E G    PS   R PS        QGS G
Sbjct: 279 CRIRSRSPPLLGSSLGCP-----RTPTPGLTEGGGTGLPSKQRRGPSPKTELGGPQGSLG 333

Query: 162 QTKSSARGG 170
           +   S   G
Sbjct: 334 RASLSGPFG 342


>gi|88957790 PREDICTED: hypothetical protein LOC389043 [Homo
           sapiens]
          Length = 108

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 115 LHSHSPPMLSSLGAPLASLGHR--PRLGCEEAGAPPSDDARCPSQGSG 160
           +H  S P   ++   L +LG R  P   C   G  PS+D R   +GSG
Sbjct: 36  VHPGSQPSEGTMEIQLLTLGSRRIPDHSCVHPGREPSEDFRDHLEGSG 83


>gi|28559039 mediator complex subunit 1 [Homo sapiens]
          Length = 1581

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 20/79 (25%)

Query: 112  LCPLHSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDARCP-SQGSGGQTKSSARGG 170
            + P HS  P     L +P+  +           G PPS  A+ P S GSGG   S     
Sbjct: 1191 ISPSHSRPPGGSDKLASPMKPV----------PGTPPSSKAKSPISSGSGGSHMSGTSSS 1240

Query: 171  KILFPGKGMWGLLASCGMG 189
                      G+ +S G+G
Sbjct: 1241 S---------GMKSSSGLG 1250


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 114 PLHSHSPPM----LSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARG 169
           PL    PP     LS LG P  S   +       A   P+  A  P+QG G Q++  A G
Sbjct: 480 PLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGG 539


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 114 PLHSHSPPM----LSSLGAPLASLGHRPRLGCEEAGAPPSDDARCPSQGSGGQTKSSARG 169
           PL    PP     LS LG P  S   +       A   P+  A  P+QG G Q++  A G
Sbjct: 480 PLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGG 539


>gi|225637489 hypothetical protein LOC54777 [Homo sapiens]
          Length = 2441

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 114  PLHSHSPPMLSSLGAPLASLGHRPRLGCEEAGAPPSDDAR 153
            P H H P  + S    L  LG  P LG   A  PP   +R
Sbjct: 2344 PTHPHLPAPIPSSQLALPFLGLSPALGAASARDPPPATSR 2383


>gi|215272321 chemokine-like receptor 1 isoform a [Homo sapiens]
          Length = 373

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 98  FSLLLSVSVHFSVCLCPLHSHS---------PPMLSSLGAPLAS 132
           F +++++ + F +C CP H+ +         P  + SLG PLA+
Sbjct: 259 FKIIVTIIITFFLCWCPYHTLNLLELHHTAMPGSVFSLGLPLAT 302


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,738,739
Number of Sequences: 37866
Number of extensions: 420338
Number of successful extensions: 1561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1531
Number of HSP's gapped (non-prelim): 56
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.