Guide to the Human Genome
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Name: CREG2 Sequence: fasta or formatted (290aa) NCBI GI: 24475869
Description:

cellular repressor of E1A-stimulated genes 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         33           2
 C cysteine            2.1          6           2
 D aspartate           3.1          9           1
 E glutamate           6.6         19           2
 F phenylalanine       4.1         12           2
 G glycine             6.6         19           2
 H histidine           2.1          6           1
 I isoleucine          3.1          9           1
 K lysine              4.1         12           2
 L leucine             6.9         20           2
 M methionine          4.1         12           1
 N asparagine          2.1          6           2
 P proline             9.3         27           3
 Q glutamine           3.1          9           2
 R arginine            7.9         23           2
 S serine              9.3         27           2
 T threonine           3.8         11           1
 V valine              5.5         16           2
 W tryptophan          2.8          8           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cellular repressor of E1A-stimulated genes 2 
CREG1                 0.214   cellular repressor of E1A-stimulated genes 
C1QTNF8               0.016   C1q and tumor necrosis factor related protein 8 [Ho...
LOC728503             0.016   PREDICTED: hypothetical protein 
LOC100291890          0.016   PREDICTED: hypothetical protein XP_002344521 
LOC728503             0.016   PREDICTED: hypothetical protein 
LOC100289901          0.016   PREDICTED: hypothetical protein XP_002347167 
LOC728503             0.016   PREDICTED: hypothetical protein 
LOC100288618          0.016   PREDICTED: hypothetical protein XP_002344285 
MLXIP                 0.014   MLX interacting protein 
LOC729370             0.014   PREDICTED: hypothetical protein 
CHADL                 0.014   chondroadherin-like 
SPATC1                0.012   spermatogenesis and centriole associated 1 isoform ...
SPATC1                0.012   spermatogenesis and centriole associated 1 isoform ...
LOC646862             0.012   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.012   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.012   PREDICTED: hypothetical protein LOC646862 
IGSF8                 0.012   immunoglobulin superfamily, member 8 
WBP11                 0.012   WW domain binding protein 11 
LOC100127891          0.012   PREDICTED: hypothetical protein 
TNRC18                0.012   trinucleotide repeat containing 18 
CAMK2B                0.012   calcium/calmodulin-dependent protein kinase II beta ...
LOC283999             0.010   hypothetical protein LOC283999 
LOC100289065          0.010   PREDICTED: hypothetical protein 
LOC100289065          0.010   PREDICTED: hypothetical protein XP_002343789 
TCF19                 0.010   transcription factor 19 
TCF19                 0.010   transcription factor 19 
MAP6D1                0.010   MAP6 domain containing 1 
LOC100291781          0.010   PREDICTED: hypothetical protein XP_002344871 
LOC100131225          0.010   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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