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Search of human proteins with 167614502
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|167614502 protein phosphatase 1, regulatory (inhibitor)
subunit 3A [Homo sapiens]
(1122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|167614502 protein phosphatase 1, regulatory (inhibitor) subun... 2261 0.0
gi|4885559 protein phosphatase 1, regulatory (inhibitor) subunit... 93 2e-18
gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo sa... 84 7e-16
gi|153792466 protein phosphatase 1, regulatory (inhibitor) subun... 82 3e-15
gi|239757810 PREDICTED: similar to protein phosphatase 1, regula... 80 1e-14
gi|58761532 protein phosphatase 1, regulatory (inhibitor) subuni... 80 1e-14
gi|223278393 protein phosphatase 1, regulatory (inhibitor) subun... 63 2e-09
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 41 0.007
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 41 0.007
gi|87299628 biorientation of chromosomes in cell division 1-like... 39 0.028
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 38 0.062
gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 37 0.11
gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens] 37 0.11
gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 37 0.11
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 37 0.14
gi|50363230 RAB11 family interacting protein 1 isoform 2 [Homo s... 37 0.14
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 37 0.14
gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo sapi... 36 0.23
gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo sapi... 36 0.23
gi|41393608 reticulon 3 isoform b [Homo sapiens] 36 0.23
gi|50083281 KIAA1853 protein [Homo sapiens] 36 0.23
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 35 0.31
gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo ... 35 0.52
gi|39812492 TH1-like protein [Homo sapiens] 34 0.68
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 34 0.68
gi|4505121 methyl-CpG binding domain protein 4 [Homo sapiens] 34 0.89
gi|13376834 zinc finger and SCAN domain containing 16 [Homo sapi... 34 0.89
gi|50962882 G patch domain containing 8 [Homo sapiens] 34 0.89
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 34 0.89
gi|123173752 synaptotagmin XIV-like [Homo sapiens] 33 1.2
>gi|167614502 protein phosphatase 1, regulatory (inhibitor) subunit 3A
[Homo sapiens]
Length = 1122
Score = 2261 bits (5859), Expect = 0.0
Identities = 1122/1122 (100%), Positives = 1122/1122 (100%)
Query: 1 MEPSEVPSQISKDNFLEVPNLSDSLCEDEEVTFQPGFSPQPSRRGSDSSEDIYLDTPSSG 60
MEPSEVPSQISKDNFLEVPNLSDSLCEDEEVTFQPGFSPQPSRRGSDSSEDIYLDTPSSG
Sbjct: 1 MEPSEVPSQISKDNFLEVPNLSDSLCEDEEVTFQPGFSPQPSRRGSDSSEDIYLDTPSSG 60
Query: 61 TRRVSFADSFGFNLVSVKEFDCWELPSASTTFDLGTDIFHTEEYVLAPLFDLPSSKEDLM 120
TRRVSFADSFGFNLVSVKEFDCWELPSASTTFDLGTDIFHTEEYVLAPLFDLPSSKEDLM
Sbjct: 61 TRRVSFADSFGFNLVSVKEFDCWELPSASTTFDLGTDIFHTEEYVLAPLFDLPSSKEDLM 120
Query: 121 QQLQIQKAILESTESLLGSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNS 180
QQLQIQKAILESTESLLGSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNS
Sbjct: 121 QQLQIQKAILESTESLLGSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNS 180
Query: 181 CDGETDQFSFKIVLVPPYQKDGSKVEFCIRYETSVGTFWSNNNGTNYTFICQKKEQEPEP 240
CDGETDQFSFKIVLVPPYQKDGSKVEFCIRYETSVGTFWSNNNGTNYTFICQKKEQEPEP
Sbjct: 181 CDGETDQFSFKIVLVPPYQKDGSKVEFCIRYETSVGTFWSNNNGTNYTFICQKKEQEPEP 240
Query: 241 VKPWKEVPNRQIKGCLKVKSSKEESSVTSEENNFENPKNTDTYIPTIICSHEDKEDLEAS 300
VKPWKEVPNRQIKGCLKVKSSKEESSVTSEENNFENPKNTDTYIPTIICSHEDKEDLEAS
Sbjct: 241 VKPWKEVPNRQIKGCLKVKSSKEESSVTSEENNFENPKNTDTYIPTIICSHEDKEDLEAS 300
Query: 301 NRNVKDVNREHDEHNEKELELMINQHLIRTRSTASRDERNTFSTDPVNFPNKAEGLEKKQ 360
NRNVKDVNREHDEHNEKELELMINQHLIRTRSTASRDERNTFSTDPVNFPNKAEGLEKKQ
Sbjct: 301 NRNVKDVNREHDEHNEKELELMINQHLIRTRSTASRDERNTFSTDPVNFPNKAEGLEKKQ 360
Query: 361 IHGEICTDLFQRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLG 420
IHGEICTDLFQRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLG
Sbjct: 361 IHGEICTDLFQRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLG 420
Query: 421 DTSSDELVQLHTGSKEVLDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEGGAKNIEVK 480
DTSSDELVQLHTGSKEVLDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEGGAKNIEVK
Sbjct: 421 DTSSDELVQLHTGSKEVLDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEGGAKNIEVK 480
Query: 481 DLGCLRRDFHSDTSACLKESTEEGSSKEDYYGNGKDDEEQRIYLGVNEKQRKNFQTILHD 540
DLGCLRRDFHSDTSACLKESTEEGSSKEDYYGNGKDDEEQRIYLGVNEKQRKNFQTILHD
Sbjct: 481 DLGCLRRDFHSDTSACLKESTEEGSSKEDYYGNGKDDEEQRIYLGVNEKQRKNFQTILHD 540
Query: 541 QERKMGNPKISVAGIGASNRDLATLLSEHTAIPTRAITADVSHSPRTNLSWEEAVLTPEH 600
QERKMGNPKISVAGIGASNRDLATLLSEHTAIPTRAITADVSHSPRTNLSWEEAVLTPEH
Sbjct: 541 QERKMGNPKISVAGIGASNRDLATLLSEHTAIPTRAITADVSHSPRTNLSWEEAVLTPEH 600
Query: 601 HHLTSEGSALGGITGQVCSSRTGNVLRNDYLFQVEEKSGGINSEDQDNSPQHKQSWNVLE 660
HHLTSEGSALGGITGQVCSSRTGNVLRNDYLFQVEEKSGGINSEDQDNSPQHKQSWNVLE
Sbjct: 601 HHLTSEGSALGGITGQVCSSRTGNVLRNDYLFQVEEKSGGINSEDQDNSPQHKQSWNVLE 660
Query: 661 SQGKSRENKTNITEHIKGQTDCEDVWGKRDNTRSLKATTEELFTCQETVCCELSSLADHG 720
SQGKSRENKTNITEHIKGQTDCEDVWGKRDNTRSLKATTEELFTCQETVCCELSSLADHG
Sbjct: 661 SQGKSRENKTNITEHIKGQTDCEDVWGKRDNTRSLKATTEELFTCQETVCCELSSLADHG 720
Query: 721 ITEKAEAGTAYIIKTTSESTPESMSAREKAIIAKLPQETARSDRPIEVKETAFDPHEGRN 780
ITEKAEAGTAYIIKTTSESTPESMSAREKAIIAKLPQETARSDRPIEVKETAFDPHEGRN
Sbjct: 721 ITEKAEAGTAYIIKTTSESTPESMSAREKAIIAKLPQETARSDRPIEVKETAFDPHEGRN 780
Query: 781 DDSHYTLCQRDTVGVIYDNDFEKESRLGICNVRVDEMEKEETMSMYNPRKTHDREKCGTG 840
DDSHYTLCQRDTVGVIYDNDFEKESRLGICNVRVDEMEKEETMSMYNPRKTHDREKCGTG
Sbjct: 781 DDSHYTLCQRDTVGVIYDNDFEKESRLGICNVRVDEMEKEETMSMYNPRKTHDREKCGTG 840
Query: 841 NITSVEESSWVITEYQKATSKLDLQLGMLPTDKTVFSENRDLRQVQELSKKTDSDAIVHS 900
NITSVEESSWVITEYQKATSKLDLQLGMLPTDKTVFSENRDLRQVQELSKKTDSDAIVHS
Sbjct: 841 NITSVEESSWVITEYQKATSKLDLQLGMLPTDKTVFSENRDLRQVQELSKKTDSDAIVHS 900
Query: 901 AFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVENAVTTMASQPISTKSENICNSTREI 960
AFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVENAVTTMASQPISTKSENICNSTREI
Sbjct: 901 AFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVENAVTTMASQPISTKSENICNSTREI 960
Query: 961 QGIEKHPYPESKPEEVSRSSGIVTSGSRKERCIGQIFQTEEYSVEKSLGPMILINKPLEN 1020
QGIEKHPYPESKPEEVSRSSGIVTSGSRKERCIGQIFQTEEYSVEKSLGPMILINKPLEN
Sbjct: 961 QGIEKHPYPESKPEEVSRSSGIVTSGSRKERCIGQIFQTEEYSVEKSLGPMILINKPLEN 1020
Query: 1021 MEEARHENEGLVSSGQSLYTSGEKESDSSASTSLPVEESQAQGNESLFSKYTNSKIPYFL 1080
MEEARHENEGLVSSGQSLYTSGEKESDSSASTSLPVEESQAQGNESLFSKYTNSKIPYFL
Sbjct: 1021 MEEARHENEGLVSSGQSLYTSGEKESDSSASTSLPVEESQAQGNESLFSKYTNSKIPYFL 1080
Query: 1081 LFLIFLITVYHYDLMIGLTFYVLSLSWLSWEEGRQKESVKKK 1122
LFLIFLITVYHYDLMIGLTFYVLSLSWLSWEEGRQKESVKKK
Sbjct: 1081 LFLIFLITVYHYDLMIGLTFYVLSLSWLSWEEGRQKESVKKK 1122
>gi|4885559 protein phosphatase 1, regulatory (inhibitor) subunit 3C
[Homo sapiens]
Length = 317
Score = 92.8 bits (229), Expect = 2e-18
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 12/178 (6%)
Query: 62 RRVSFADSFGFNLVSVKEF-DCWELPSASTTFDL------GTDIFHTEEYVLAPLFDLPS 114
+RV FADS G +L ++ F D E P+ FDL + + H EE L + D P
Sbjct: 83 KRVVFADSKGLSLTAIHVFSDLPEEPAWDLQFDLLDLNDISSALKHHEEKNL--ILDFPQ 140
Query: 115 SKEDLMQ-QLQIQKAILESTESLLGSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDIL 173
D + + QK + L ++ G ++V NVSFEK V +R++ D W+ + D+
Sbjct: 141 PSTDYLSFRSHFQKNFVCLENCSLQERTVTGTVKVKNVSFEKKVQIRITFDSWKNYTDVD 200
Query: 174 AEYVPNSCDG-ETDQFSFKIVLVPPYQKDGSKVEFCIRYETSVGTFWSNNNGTNYTFI 230
Y+ N G ++D FSF I L PP K+EFCI Y + FW NN+G NY +
Sbjct: 201 CVYMKNVYGGTDSDTFSFAIDL-PPVIPTEQKIEFCISYHANGQVFWDNNDGQNYRIV 257
>gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo
sapiens]
Length = 299
Score = 84.0 bits (206), Expect = 7e-16
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 63 RVSFADSFGFNLVSVKEFDCWELPSAS----TTFDLGTDIFHTEE------YVLAPLFDL 112
RV FAD+ G L VK F+ + PS + + +D+ + + + L P F
Sbjct: 102 RVRFADALGLELAQVKVFNAGDDPSVPLHVLSRLAINSDLCCSSQDLEFTLHCLVPDFPP 161
Query: 113 PSSKEDLMQQLQIQKAILES-TESLLGSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYD 171
P D ++LQ Q LE T S LG I G +RV NV+FEK V VR + W++ ++
Sbjct: 162 PVEAADFGERLQRQLVCLERVTCSDLG---ISGTVRVCNVAFEKQVAVRYTFSGWRSTHE 218
Query: 172 ILAEYV-PNSCDGETDQFSFKIVLVPPYQKDGSKVEFCIRYETSVGTFWSNNNGTNYTFI 230
+A + P +G D F+F + P + GS+V F +RY+ + +W NN+ +Y+
Sbjct: 219 AVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYSLT 278
Query: 231 CQ 232
C+
Sbjct: 279 CR 280
>gi|153792466 protein phosphatase 1, regulatory (inhibitor) subunit
3B [Homo sapiens]
Length = 285
Score = 82.0 bits (201), Expect = 3e-15
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 62 RRVSFADSFGFNLVSVKEFDCWELP-----SASTTFDLGTDIFHTEEYVLAPLFDLPSSK 116
+RVSFAD+ G L VK F ++ P + + D + E F PS+
Sbjct: 61 KRVSFADNQGLALTMVKVFSEFDDPLDMPFNITELLDNIVSLTTAESESFVLDFSQPSAD 120
Query: 117 E-DLMQQLQIQKAILESTESLLGSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDILAE 175
D +LQ LE+ +L +I G ++V N++FEK V +RM+ D W+++ D +
Sbjct: 121 YLDFRNRLQADHVCLENC--VLKDKAIAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQ 178
Query: 176 YVPNSCDG-ETDQFSFKIVLVPPYQKDGSKVEFCIRYETSVGTFWSNNNGTNYTFICQKK 234
YV ++ G + D FSF I L P + ++EF + YE + T+W +N G NY I +
Sbjct: 179 YVKDTYAGSDRDTFSFDISL-PEKIQSYERMEFAVYYECNGQTYWDSNRGKNYRIIRAEL 237
Query: 235 EQEPEPVKP 243
+ KP
Sbjct: 238 KSTQGMTKP 246
>gi|239757810 PREDICTED: similar to protein phosphatase 1,
regulatory (inhibitor) subunit 3F [Homo sapiens]
Length = 724
Score = 80.1 bits (196), Expect = 1e-14
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 76/250 (30%)
Query: 104 YVLAPLFDLPSSK---EDLMQQLQIQKAILESTESLLGSTSI----------KGIIRVLN 150
+ L P F LP + E L + + +A+L ++ G + +G++RVLN
Sbjct: 113 FYLVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLN 172
Query: 151 VSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD---------------------------- 182
SFEK V+VR S D W + D A YVP S
Sbjct: 173 RSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASAS 232
Query: 183 -----GETDQFSFKIVLVPPYQK---DGSKVEFCIRYETSVGTFWSNNNGTNYTFIC--- 231
G TD+F+F++ P+ + DG++++F +RYET GTFW+NN+G NYT +
Sbjct: 233 SPDDGGRTDRFAFQL----PFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIA 288
Query: 232 ---------------QKKEQEPEP-VKPWKEVPNRQIKGCLKV----KSSKEESSVTSEE 271
Q + EP+P + E RQ+K C+K + +E + ++
Sbjct: 289 PAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDD 348
Query: 272 NNFENPKNTD 281
N F ++ D
Sbjct: 349 NTFAMAEHPD 358
>gi|58761532 protein phosphatase 1, regulatory (inhibitor) subunit
3F [Homo sapiens]
Length = 799
Score = 80.1 bits (196), Expect = 1e-14
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 76/250 (30%)
Query: 104 YVLAPLFDLPSSK---EDLMQQLQIQKAILESTESLLGSTSI----------KGIIRVLN 150
+ L P F LP + E L + + +A+L ++ G + +G++RVLN
Sbjct: 113 FYLVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLN 172
Query: 151 VSFEKLVYVRMSLDDWQTHYDILAEYVPNSCD---------------------------- 182
SFEK V+VR S D W + D A YVP S
Sbjct: 173 RSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASAS 232
Query: 183 -----GETDQFSFKIVLVPPYQK---DGSKVEFCIRYETSVGTFWSNNNGTNYTFIC--- 231
G TD+F+F++ P+ + DG++++F +RYET GTFW+NN+G NYT +
Sbjct: 233 SPDDGGRTDRFAFQL----PFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIA 288
Query: 232 ---------------QKKEQEPEP-VKPWKEVPNRQIKGCLKV----KSSKEESSVTSEE 271
Q + EP+P + E RQ+K C+K + +E + ++
Sbjct: 289 PAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDD 348
Query: 272 NNFENPKNTD 281
N F ++ D
Sbjct: 349 NTFAMAEHPD 358
>gi|223278393 protein phosphatase 1, regulatory (inhibitor) subunit
3G [Homo sapiens]
Length = 358
Score = 62.8 bits (151), Expect = 2e-09
Identities = 62/240 (25%), Positives = 92/240 (38%), Gaps = 57/240 (23%)
Query: 45 GSDSSEDIYLDTP---SSGTRRVSFADSFGFNLVSVKEFDCWELP-------SASTTFDL 94
G + +ED L + +RV FAD+ G +L SVK F E P S +F +
Sbjct: 110 GGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSRLRSFPM 169
Query: 95 GTDIFHTEEYVLA----------------PLFDLPSSKEDLMQQLQIQKAILESTE-SLL 137
+ +LA PLF LP ++LQ Q+ LE + S
Sbjct: 170 RAEDLEQLGGLLAAAAVAAPLSAPPSRLRPLFQLPGPSA-AAERLQRQRVCLERVQCSTA 228
Query: 138 GSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYVPNSCDGETDQ---------- 187
+KG RVL+ + V VR + +W++ D+ AE P + + +
Sbjct: 229 SGAEVKGSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPSGASEPGS 288
Query: 188 -----------FSFKIVLVPPYQKD--------GSKVEFCIRYETSVGTFWSNNNGTNYT 228
F F + L P Q + G V F + Y + G +W NN G NYT
Sbjct: 289 GDAKKEPGAECFHFSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWDNNAGANYT 348
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 40.8 bits (94), Expect = 0.007
Identities = 95/423 (22%), Positives = 155/423 (36%), Gaps = 53/423 (12%)
Query: 599 EHHHLTSEGSALGGITGQVCSSRTGNVLRN-DYLFQVEEK--SGGINSEDQDNSPQHK-Q 654
E L + S GG+ + S R N + YL VEE+ + S++ D + Q
Sbjct: 4079 ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEEVEESSVKSDNGDEKAEPSPQ 4138
Query: 655 SWNVLESQGKSRENKTNITEHIKGQTDCEDVWGK---RDNTRSLKATTEELFTCQETVCC 711
SW+ L K E + T ++ +GK DN+ + T + L T Q C
Sbjct: 4139 SWSSLWKHDKDMEEDRASSS---SGTIVQEAYGKISTSDNSMAQILTPDSLNTEQGPECS 4195
Query: 712 ELSSLADHGITEKAEAGTAYIIKTTSESTPESMSAREKA--IIAKLPQETARSDRPIEVK 769
+ + G T EA T P R + ++ + A + ++
Sbjct: 4196 LRPNQTEEGTTPPIEADTLDSSDAQGGLEPRVEKTRPEPTEVLHACKTQVAELELWLQQA 4255
Query: 770 ETAFDPHEGRNDDSHYTL------CQRDTVGVIYDNDFE----KESRLGICNVRVDEMEK 819
A +P E N D L CQ + + F K+ LG E E
Sbjct: 4256 NVAVEP-ETLNADMQQVLEQQLVGCQAMLTEIEHKVAFLLETCKDQGLGDNGATQHEAEA 4314
Query: 820 ------------EETMSMYNPRKTHDREKCGTGNITSVEESSWVITEYQKATSKLDL-QL 866
E+ M + + D+ T +++SS E+Q+A ++L +L
Sbjct: 4315 LSLKLKTVKCNLEKVQMMLQEKHSEDQHP------TILKKSSE--PEHQEALQPVNLSEL 4366
Query: 867 GMLPTDKTVFSENRDLRQVQ--ELSKKTDSDAIVHSAFNSDTNRAPQNSSPFSKHHTEIS 924
+ T++ FS +D +Q Q EL D I FN+ PQ + +H + +
Sbjct: 4367 ESIVTERPQFSRQKDFQQQQVLELKPMEQKDFIKFIEFNAK-KMWPQ----YCQHDNDTT 4421
Query: 925 V--STNEQAIAVENAVTTMASQPISTKSENICNSTREIQGIEKHPYPESKPEEVSRSSGI 982
S + QA + EN V P + E+ K P P+ +VS + GI
Sbjct: 4422 QESSASNQASSPENDVPDSILSPQGQNGDKWQYLHHELSSKIKLPLPQLVEPQVSTNMGI 4481
Query: 983 VTS 985
+ S
Sbjct: 4482 LPS 4484
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 40.8 bits (94), Expect = 0.007
Identities = 95/423 (22%), Positives = 155/423 (36%), Gaps = 53/423 (12%)
Query: 599 EHHHLTSEGSALGGITGQVCSSRTGNVLRN-DYLFQVEEK--SGGINSEDQDNSPQHK-Q 654
E L + S GG+ + S R N + YL VEE+ + S++ D + Q
Sbjct: 4079 ERDRLPAVTSEEGGVAERDASERKLNRRGSMSYLAAVEEEVEESSVKSDNGDEKAEPSPQ 4138
Query: 655 SWNVLESQGKSRENKTNITEHIKGQTDCEDVWGK---RDNTRSLKATTEELFTCQETVCC 711
SW+ L K E + T ++ +GK DN+ + T + L T Q C
Sbjct: 4139 SWSSLWKHDKDMEEDRASSS---SGTIVQEAYGKISTSDNSMAQILTPDSLNTEQGPECS 4195
Query: 712 ELSSLADHGITEKAEAGTAYIIKTTSESTPESMSAREKA--IIAKLPQETARSDRPIEVK 769
+ + G T EA T P R + ++ + A + ++
Sbjct: 4196 LRPNQTEEGTTPPIEADTLDSSDAQGGLEPRVEKTRPEPTEVLHACKTQVAELELWLQQA 4255
Query: 770 ETAFDPHEGRNDDSHYTL------CQRDTVGVIYDNDFE----KESRLGICNVRVDEMEK 819
A +P E N D L CQ + + F K+ LG E E
Sbjct: 4256 NVAVEP-ETLNADMQQVLEQQLVGCQAMLTEIEHKVAFLLETCKDQGLGDNGATQHEAEA 4314
Query: 820 ------------EETMSMYNPRKTHDREKCGTGNITSVEESSWVITEYQKATSKLDL-QL 866
E+ M + + D+ T +++SS E+Q+A ++L +L
Sbjct: 4315 LSLKLKTVKCNLEKVQMMLQEKHSEDQHP------TILKKSSE--PEHQEALQPVNLSEL 4366
Query: 867 GMLPTDKTVFSENRDLRQVQ--ELSKKTDSDAIVHSAFNSDTNRAPQNSSPFSKHHTEIS 924
+ T++ FS +D +Q Q EL D I FN+ PQ + +H + +
Sbjct: 4367 ESIVTERPQFSRQKDFQQQQVLELKPMEQKDFIKFIEFNAK-KMWPQ----YCQHDNDTT 4421
Query: 925 V--STNEQAIAVENAVTTMASQPISTKSENICNSTREIQGIEKHPYPESKPEEVSRSSGI 982
S + QA + EN V P + E+ K P P+ +VS + GI
Sbjct: 4422 QESSASNQASSPENDVPDSILSPQGQNGDKWQYLHHELSSKIKLPLPQLVEPQVSTNMGI 4481
Query: 983 VTS 985
+ S
Sbjct: 4482 LPS 4484
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 38.9 bits (89), Expect = 0.028
Identities = 92/456 (20%), Positives = 168/456 (36%), Gaps = 73/456 (16%)
Query: 659 LESQGKSRENKTNITEHIKGQTDCEDVWGKRDNTRSLKATTEELFTCQETVCCELSSLAD 718
LE + K R + I E ++ +TD TR +K E C E + S+L +
Sbjct: 650 LEREHKRRTSTPVIMEGVQEETD----------TRDVKRQVERSEICTEEPQKQKSTLKN 699
Query: 719 HGITEKAEAGTAYIIKTTSESTPESMSAREKAIIAKLPQETARSDRPIEVKETAFDPHEG 778
+K ++ T ++ + E S++EK K P E S + H+
Sbjct: 700 EKHLKKDDSETPHLKSLLKK---EVKSSKEKPEREKTPSEDKLSVK-----------HKY 745
Query: 779 RNDDSHYTLCQRDT----VGVIYDNDFEKESRLGICNVRVDEMEKEETMSMY-NPRKTHD 833
+ D H T + + G+ + + +K+S+ ++ +K E S + N RK
Sbjct: 746 KGDCMHKTGDETELHSSEKGLKVEENIQKQSQ----QTKLSSDDKTERKSKHRNERKLSV 801
Query: 834 REKCG---TGNITSVEESSWVITEYQKATSKLDLQL------GMLPTDKTVFSENRDLRQ 884
K G + I +E+ V E K +L + +D + ++ +Q
Sbjct: 802 LGKDGKPVSEYIIKTDEN--VRKENNKKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQ 859
Query: 885 ----VQELSKKTDSDAIVHSAFNSDTNRAPQNSSPFSKHHTEI-----------SVSTNE 929
+Q S+ D + N D+N P+ K T+ S + +
Sbjct: 860 HGITLQRRSESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLVLKSKSKTQGK 919
Query: 930 QAIAVENAV----TTMASQPISTKSENICNSTREIQG---IEKHPYPESKPEEVSRSSGI 982
Q VE + T A+ P K +N + E Q +E P+ E+ E V ++
Sbjct: 920 QVKVVETELQEGATKQATTPKPDKEKNTEENDSEKQRKSKVEDKPFEETGVEPVLETASS 979
Query: 983 VTSGSRKERC--IGQIFQTEEYSVEKSLGPMILINKPLENMEEARHENEGLVSSGQSLYT 1040
++K+ E+Y +K + LE H++ L S + +
Sbjct: 980 SAHSTQKDSSHRAKLPLAKEKYKSDKDS-----TSTRLERKLSDGHKSRSLKHSSKDIKK 1034
Query: 1041 SGEKESDSSASTSLPVEESQAQGNESLFSKYTNSKI 1076
E +SD + +A+GN SL K + ++
Sbjct: 1035 KDENKSDDKDGKEVDSSHEKARGNSSLMEKKLSRRL 1070
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 37.7 bits (86), Expect = 0.062
Identities = 111/746 (14%), Positives = 263/746 (35%), Gaps = 38/746 (5%)
Query: 260 SSKEESSVTSEENNFENPKNTDTYIPTIICSHEDKEDLEASNRNVKDVNREHDEHNEKEL 319
S+ +SS +S+ ++ ++ ++D+ D + ++S+ + D + D + +
Sbjct: 558 SNSSDSSDSSDSDSSDSNSSSDS-------DSSDSDSSDSSDSDSSDSSNSSDSSDSSDS 610
Query: 320 ELMINQHLIRTRSTASRDERNTFSTDPVNFPNKAEGLEKKQIHGEICTDLFQRSLSPSSS 379
+ + S+ S+ + + +D + +K++ + +D S S +SS
Sbjct: 611 SDSSDS----SDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSS 666
Query: 380 --AESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLGDTSSDELVQLHTGSKEV 437
++SS D + S+ D + +S + S SSD ++ S +
Sbjct: 667 DSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDS 726
Query: 438 LDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEG-----GAKNIEVKDLGCLRRDFHSD 492
N++ + + SSD + + + + + + + D S+
Sbjct: 727 DSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSN 786
Query: 493 TSACLKESTEEGSSKEDYYGNGKDDEEQRIYLGVNEKQRKNFQTILHDQERKMGNPKISV 552
S+ +S++ +S + + D + + + D + S
Sbjct: 787 DSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSD 846
Query: 553 AGIG----ASNRDLATLLSEHTAIPTRAITADVSHSPRTNLSWEEAVLTPEHHHLTSEGS 608
+ G +SNR ++ S+ + + ++D S S +N S + + + S+ S
Sbjct: 847 SSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSS 906
Query: 609 ALGG------ITGQVCSSRTGNVLRNDYLFQVEEKSGGINSEDQDNSPQHKQSWNVLESQ 662
+ SS + N N S +S D NS S + S
Sbjct: 907 DSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSS 966
Query: 663 GKSRENKTNITEHIKGQTDCEDVWGKRDNTRSLKATTEELFTCQETVCCELSSLADHGIT 722
S N ++ ++ +D D D++ S ++ + +S +
Sbjct: 967 DSSDSNSSDSSDS-SNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSS 1025
Query: 723 EKAEAGTAYIIKTTSESTPESMSAREKAIIAKLPQETARSDRPIEVKETAFDPHEGRNDD 782
+ + + + +S+S+ S S+ +++ S + +++ + D
Sbjct: 1026 DSSNSSDSSDSSDSSDSSDSSDSSDS--------SDSSNSSDSSDSSDSSDSSDSSDSSD 1077
Query: 783 SHYTLCQRDTVGVIYDNDFEKESRLGICNVRVDEMEKEETMSMYNPRKTHDREKCGTGNI 842
S + D+ +D S + D + ++ N + D +
Sbjct: 1078 SSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSD 1137
Query: 843 TSVEESSWVITEYQKATSKLDLQLGMLPTDKTVFSENRDLRQVQELSKKTDSDAIVHSAF 902
+S S +E ++ D +D + S++ D + S +DS S+
Sbjct: 1138 SSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSD 1197
Query: 903 NSDTNRAPQNS-SPFSKHHTEISVSTNEQAIAVENAVTTMASQPISTKSENICNSTREIQ 961
+SD++ + +S S S ++ S S++ + N + + S+ S N +S+
Sbjct: 1198 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSD 1257
Query: 962 GIEKHPYPESKPEEVSRSSGIVTSGS 987
+ + + S+S +GS
Sbjct: 1258 SSDSTSDSNDESDSQSKSGNGNNNGS 1283
Score = 35.0 bits (79), Expect = 0.40
Identities = 123/805 (15%), Positives = 280/805 (34%), Gaps = 50/805 (6%)
Query: 263 EESSVTSEENNFENPKNTDTYIPTIICSHEDKEDLEASNRNVKDVNREHDEHNEKELELM 322
++S TS+ NN ++ N + S K ++S+ + D + D + + +
Sbjct: 513 DDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSS 572
Query: 323 INQHLIRTRSTAS--RDERNTFSTDPVNFPNKAEGLEKKQIH--GEICTDLFQRSLSPSS 378
+ + S+ S D ++ S+D N + ++ + + S S S
Sbjct: 573 DSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESD 632
Query: 379 SAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPS-LGDTSSDELVQLHTGSKEV 437
S++S K D + S D+ S ++++ S D+SS + S +
Sbjct: 633 SSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDS 692
Query: 438 LDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEGGAKNIEVKDLGCLRRDFHSDTSACL 497
D + + + + SSD + N N + + + D SD+S
Sbjct: 693 SDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSS--NSSDSSDSSDSS 750
Query: 498 KESTEEGSSKEDYYGNGKDDEEQRIYLGVNEKQRKNFQTILHDQERKMGNPKISVAGIGA 557
S SS + D + + N + D + S + +
Sbjct: 751 NSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSS 810
Query: 558 SNRDLATLLSEHTAIPTRAITADVSHSPRTNLSWEEAVLTPEHHHLTSEGSALGGITGQV 617
+ D + S +++ + + +D S S ++ S + + + +S S +
Sbjct: 811 DSSDSSDSDSSNSSDSSNS--SDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSS 868
Query: 618 CSSRTGNVLRNDYLFQVEEKSGGINSEDQDNSPQHKQSWNVLESQGKSRENKTNITEHIK 677
SS + N + S +S + NS S N +S N ++ ++
Sbjct: 869 DSSDSSNS---------SDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDS-S 918
Query: 678 GQTDCEDVWGKRDNTRSLKATTEELFTCQETVCCELSSLADHGITEKAEAGTAYIIKTTS 737
+D + DN+ S ++ + + S+ +D + + + +S
Sbjct: 919 NSSDSSESSNSSDNSNSSDSSNSS----DSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSS 974
Query: 738 ESTPESMSAREKAIIAKLPQETARSDRPIEVKETAFDPHEGRNDDSHYTLCQRDTVGVIY 797
+S+ S S+ +++ S + +++ + + DS + ++
Sbjct: 975 DSSDSSNSS-----------DSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSN 1023
Query: 798 DNDFEKESRLGICNVRVDEMEKEETMSMYNPRKTHDREKCGTGNITSVEESSWVITEYQK 857
+D S + D + ++ + + D + +S S ++ +
Sbjct: 1024 SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSE 1083
Query: 858 ATSKLDLQLGMLPTDKTVFSENRDLRQVQELSKKTDSDAIVHSAFNSDTNRAPQNSSPFS 917
++ D +D + S++ D + S +DS S+ +SD++ + +S+
Sbjct: 1084 SSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSD 1143
Query: 918 KHHTEISVSTNEQAIAVENAVTTMASQPISTKSENICNSTREIQGIEKHPYPESKPEEVS 977
+ S +++ + + +++ ++ +S S+ S + NS+ + +S S
Sbjct: 1144 SSDSSESSDSSDSSDSSDSSDSSDSSD--SSDSSDSSNSSDSSDSSDSSDSSDSSDSSDS 1201
Query: 978 RSSGIVTSGSRKERCIGQIFQTEEYSVEKSLGPMILINKPLENMEEARHENEGLVSSGQS 1037
S + S ++ S E+ ++ SS S
Sbjct: 1202 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDS--------------NESSDSSDSSDSSDSS 1247
Query: 1038 LYTSGEKESDSSASTSLPVEESQAQ 1062
+ SDSS STS +ES +Q
Sbjct: 1248 NSSDSSDSSDSSDSTSDSNDESDSQ 1272
Score = 34.3 bits (77), Expect = 0.68
Identities = 116/749 (15%), Positives = 270/749 (36%), Gaps = 72/749 (9%)
Query: 245 KEVPNRQIKGCLKVKSSKEESSVTSEEN-----------NFENPKNTDTYIPTIICSH-- 291
KE P+ ++ G K S+E S+ E+N N K + I +H
Sbjct: 310 KEDPHNEVDGD-KTSKSEENSAGIPEDNGSQRIEDTQKLNHRESKRVENRITKESETHAV 368
Query: 292 ---EDK----EDLEASNRNV-KDVNREHDEHNEK-ELELMINQHLIRTRSTASRDERNTF 342
+DK + + NRN+ K+V + ++ +K + +++ + ++T+ E
Sbjct: 369 GKSQDKGIEIKGPSSGNRNITKEVGKGNEGKEDKGQHGMILGKGNVKTQGEVVNIEGPGQ 428
Query: 343 STDPVNFPNKAEGLEKKQIHGEICTDLFQRSLSPSSSAESSVKGDFYCNEKYSSGDDCTH 402
++P N K H +D + S++GD + S+G+D +
Sbjct: 429 KSEPGN----------KVGHSNTGSDSNSDGYDSYDFDDKSMQGDDPNSSDESNGNDDAN 478
Query: 403 QPSEETTSNMGEIKPSLGDT-----SSDELVQLHTGSKEVLDDNANPAHGNGTVQIPCPS 457
S+ +S+ G+ + ++ SD S D N + ++GNG
Sbjct: 479 SESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGN------- 531
Query: 458 SDQLMAGNLNKKHEGGAKNIEVKDLGCLRRDFHSDTSACLKESTEEGSSKEDYYGNGKDD 517
+ N K + G + D SD+S + + +S D + D
Sbjct: 532 ----NGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDS 587
Query: 518 EEQRIYLGVNEKQRKNFQTILHDQERKMGNPKISVAGIGASNRDLATLLSEHTAIPTRAI 577
+ ++ + + + + S D + S+ + +++
Sbjct: 588 SDS------SDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSD 641
Query: 578 TADVSHSPRTNLSWEEAVLTPEHHHLTSEGSALGGITGQVCSSRTGNVLRNDYLFQVEEK 637
++D + S ++ S + +S+ S + SS + + + E
Sbjct: 642 SSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSES 701
Query: 638 SGGINSEDQDNSPQHKQSWNVLESQGKSRENKTNITEHIKGQTDCEDVWGKRDNTRSLKA 697
S +S D D+S S + S + ++ + + +D D D++ S +
Sbjct: 702 SDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 761
Query: 698 --TTEELFTCQETVCCELSSLADHG-------ITEKAEAGTAYIIKTTSESTPESMSARE 748
+++ + + + S+ +D ++ + + + +S+S+ S S
Sbjct: 762 SNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS 821
Query: 749 KAIIAKLPQETARSDRPIEVKETAFDPHEGRNDDSHYTLCQRDTVGVIYDNDFEKESRLG 808
+ + +++ S + +++ D +G + DS + D+ +D S
Sbjct: 822 NSSDSSNSSDSSDSSNSSDSSDSS-DSSDGSDSDSSN---RSDSSNSSDSSDSSDSSNSS 877
Query: 809 ICNVRVDEMEKEETMSMYNPRKTHDREKCGTGNITSVEESSWVITEYQKATSKLDLQLGM 868
+ D E + + + D + + N + +SS + + S +
Sbjct: 878 DSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSN--- 934
Query: 869 LPTDKTVFSENRDLRQVQELSKKTDSDAIVHSAFNSDTNRAPQNSSPFSKHHTEISVSTN 928
+D + S++ D S ++S +S+ +SD+N + + S S ++ S S++
Sbjct: 935 -SSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSD 993
Query: 929 EQAIAVENAVTTMASQPISTKSENICNST 957
+ + + + S+ S N +S+
Sbjct: 994 SSDSSDSSNSSDSSDSSDSSDSSNSSDSS 1022
Score = 32.7 bits (73), Expect = 2.0
Identities = 71/434 (16%), Positives = 157/434 (36%), Gaps = 22/434 (5%)
Query: 642 NSEDQDNSPQHKQSWNVLESQGKSRENKTNITEHIKGQTDCEDVWGKRDNTRSLKATTEE 701
++ D +NS + N + KS K +D + D++ S ++
Sbjct: 517 STSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDS-DSSDSN 575
Query: 702 LFTCQETVCCELSSLADHGITEKAEAGTAYIIKTTSESTPESMSAREKAIIAKLPQETAR 761
+ ++ + S +D ++ + + + +S+S+ S S+ K+ +K +++
Sbjct: 576 SSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSD 635
Query: 762 SDRPIEVKETAFDPHEGRNDDSHYTLCQRDTVGVIYDNDFEKESRLGICNVRVDEMEKEE 821
SD K + D + + D+ +D S + D + +
Sbjct: 636 SDS----KSDSSDSNSSDSSDN---------------SDSSDSSNSSNSSDSSDSSDSSD 676
Query: 822 TMSMYNPRKTHDREKCGTGNITSVEESSWVITEYQKATSKLDLQLGMLPTDKTVFSENRD 881
+ S + + D + +S S ++ + S +D + S++ D
Sbjct: 677 SSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSD 736
Query: 882 LRQVQELSKKTDSDAIVHSAFNSDTNRAPQNS-SPFSKHHTEISVSTNEQAIAVENAVTT 940
+ S +DS S+ +SD++ + +S S S ++ S S++ + + +
Sbjct: 737 SSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSD 796
Query: 941 MASQPISTKSENICNSTREIQGIEKHPYPESKPEEVSRSSGIVTSGSRKERCIGQIFQTE 1000
++ S+ S + +S+ + S + S SS S + G +
Sbjct: 797 SSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSS 856
Query: 1001 EYSVEKSLGPMILINKPLENMEEARHENEGLVSSGQSLYTSGEKESDSSASTSLPVEESQ 1060
S + S + N ++ ++ SS S + SDS +S S +S
Sbjct: 857 NRS-DSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSS 915
Query: 1061 AQGNESLFSKYTNS 1074
N S S+ +NS
Sbjct: 916 DSSNSSDSSESSNS 929
>gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 37.0 bits (84), Expect = 0.11
Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 26/278 (9%)
Query: 797 YDNDFEKESRLGICNVRVDEMEKE---ETMSMYNPRKTHDREKCGTGNITS------VEE 847
Y D E +R R E ++E E M + N + + T +T ++
Sbjct: 491 YVRDAEDMNRATAARQRDHEKQQERVREQMEVVNMSLSTSADSLTTPRLTLSELDDIIKN 550
Query: 848 SSWVITEYQKATSKLDLQLGMLPT-----DKTVFSENRDLRQ-VQELSKK---TDSDAIV 898
+S + E A S+L ++L L + +DL+Q ELS+K +D + +V
Sbjct: 551 ASGIYAEIDGAKSELQVKLSNLSNLSHDLVQEAIDHAQDLQQEANELSRKLHSSDMNGLV 610
Query: 899 HSAFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVENAVTTMASQPISTK--SENICNS 956
A D + +N + E + + +AV+ + +Q I K SEN+ N
Sbjct: 611 QKAL--DASNVYENIVNYVSEANETAEFALNTTDRIYDAVSGIDTQIIYHKDESENLLNQ 668
Query: 957 TREIQGIEKHPYPESKPEEVSRSSGIVTSGS----RKERCIGQIFQTEEYSVEKSLGPMI 1012
RE+Q + E+ + R G + S R + Q+ E ++ LG
Sbjct: 669 ARELQAKAESSSDEAVADTSRRVGGALARKSALKTRLSDAVKQLQAAERGDAQQRLGQSR 728
Query: 1013 LINKPLENMEEARHENEGLVSSGQSLYTSGEKESDSSA 1050
LI + + +++ + ++ + DSSA
Sbjct: 729 LITEEANRTTMEVQQATAPMANNLTNWSQNLQHFDSSA 766
>gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens]
Length = 1823
Score = 37.0 bits (84), Expect = 0.11
Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 26/278 (9%)
Query: 797 YDNDFEKESRLGICNVRVDEMEKE---ETMSMYNPRKTHDREKCGTGNITS------VEE 847
Y D E +R R E ++E E M + N + + T +T ++
Sbjct: 498 YVRDAEDMNRATAARQRDHEKQQERVREQMEVVNMSLSTSADSLTTPRLTLSELDDIIKN 557
Query: 848 SSWVITEYQKATSKLDLQLGMLPT-----DKTVFSENRDLRQ-VQELSKK---TDSDAIV 898
+S + E A S+L ++L L + +DL+Q ELS+K +D + +V
Sbjct: 558 ASGIYAEIDGAKSELQVKLSNLSNLSHDLVQEAIDHAQDLQQEANELSRKLHSSDMNGLV 617
Query: 899 HSAFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVENAVTTMASQPISTK--SENICNS 956
A D + +N + E + + +AV+ + +Q I K SEN+ N
Sbjct: 618 QKAL--DASNVYENIVNYVSEANETAEFALNTTDRIYDAVSGIDTQIIYHKDESENLLNQ 675
Query: 957 TREIQGIEKHPYPESKPEEVSRSSGIVTSGS----RKERCIGQIFQTEEYSVEKSLGPMI 1012
RE+Q + E+ + R G + S R + Q+ E ++ LG
Sbjct: 676 ARELQAKAESSSDEAVADTSRRVGGALARKSALKTRLSDAVKQLQAAERGDAQQRLGQSR 735
Query: 1013 LINKPLENMEEARHENEGLVSSGQSLYTSGEKESDSSA 1050
LI + + +++ + ++ + DSSA
Sbjct: 736 LITEEANRTTMEVQQATAPMANNLTNWSQNLQHFDSSA 773
>gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 37.0 bits (84), Expect = 0.11
Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 26/278 (9%)
Query: 797 YDNDFEKESRLGICNVRVDEMEKE---ETMSMYNPRKTHDREKCGTGNITS------VEE 847
Y D E +R R E ++E E M + N + + T +T ++
Sbjct: 491 YVRDAEDMNRATAARQRDHEKQQERVREQMEVVNMSLSTSADSLTTPRLTLSELDDIIKN 550
Query: 848 SSWVITEYQKATSKLDLQLGMLPT-----DKTVFSENRDLRQ-VQELSKK---TDSDAIV 898
+S + E A S+L ++L L + +DL+Q ELS+K +D + +V
Sbjct: 551 ASGIYAEIDGAKSELQVKLSNLSNLSHDLVQEAIDHAQDLQQEANELSRKLHSSDMNGLV 610
Query: 899 HSAFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVENAVTTMASQPISTK--SENICNS 956
A D + +N + E + + +AV+ + +Q I K SEN+ N
Sbjct: 611 QKAL--DASNVYENIVNYVSEANETAEFALNTTDRIYDAVSGIDTQIIYHKDESENLLNQ 668
Query: 957 TREIQGIEKHPYPESKPEEVSRSSGIVTSGS----RKERCIGQIFQTEEYSVEKSLGPMI 1012
RE+Q + E+ + R G + S R + Q+ E ++ LG
Sbjct: 669 ARELQAKAESSSDEAVADTSRRVGGALARKSALKTRLSDAVKQLQAAERGDAQQRLGQSR 728
Query: 1013 LINKPLENMEEARHENEGLVSSGQSLYTSGEKESDSSA 1050
LI + + +++ + ++ + DSSA
Sbjct: 729 LITEEANRTTMEVQQATAPMANNLTNWSQNLQHFDSSA 766
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 36.6 bits (83), Expect = 0.14
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 371 QRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLGDTSS--DELV 428
+R PS A+ V G+ C+ + + PSE+TT G KP LG +SS +L
Sbjct: 1009 ERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAPSEQTT-EFGIHKPHLGKSSSLDKQLP 1067
Query: 429 QLHTGSKEVLDDNANPAHGNGTV---QIPCPSSDQLMAGNLNKKHEGGAKNIEVKDLGCL 485
G +E N +P+ GT +P PS ++ + A +
Sbjct: 1068 GPSGGEEEKPMGNGSPSPPPGTSLDNPVPSPSPSEIFP--VTHSFPSSAHS--------- 1116
Query: 486 RRDFHSDTSACLKESTEEGSS 506
H+ T+ K++T EGS+
Sbjct: 1117 -DTHHTSTAESQKKATAEGSA 1136
>gi|50363230 RAB11 family interacting protein 1 isoform 2 [Homo
sapiens]
Length = 612
Score = 36.6 bits (83), Expect = 0.14
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 371 QRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLGDTSS--DELV 428
+R PS A+ V G+ C+ + + PSE+TT G KP LG +SS +L
Sbjct: 338 ERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAPSEQTT-EFGIHKPHLGKSSSLDKQLP 396
Query: 429 QLHTGSKEVLDDNANPAHGNGTV---QIPCPSSDQLMAGNLNKKHEGGAKNIEVKDLGCL 485
G +E N +P+ GT +P PS ++ + A +
Sbjct: 397 GPSGGEEEKPMGNGSPSPPPGTSLDNPVPSPSPSEIFP--VTHSFPSSAHS--------- 445
Query: 486 RRDFHSDTSACLKESTEEGSS 506
H+ T+ K++T EGS+
Sbjct: 446 -DTHHTSTAESQKKATAEGSA 465
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
domain 1 [Homo sapiens]
Length = 1412
Score = 36.6 bits (83), Expect = 0.14
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 20/223 (8%)
Query: 665 SRENKTNITEHIKGQTDCEDVWGKRDNTRSLKATTEELFTCQETVCCELSSLADHGITEK 724
SR+N+ I++ K Q ED+ K+ +SLK+ L V C+ S + IT
Sbjct: 274 SRQNEKEISQ--KCQVLDEDIDAKQKEIQSLKSQISALQKGYSKVLCQTLSERNSEITSL 331
Query: 725 AEAGTAYIIKTTSESTPESMSAREKAIIAK------LPQETARSDRPIEVKETAFDPHEG 778
G +K + T +S+ +K I+AK L +E + + K+ +
Sbjct: 332 KNEGEN--LKRDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDHQLEALGS 389
Query: 779 RNDDSHYTLCQRDTVGVIYDNDFEKESRLGICNVRVDEMEKEETMSMYNPRKTHDREKCG 838
R L Q D + + +E L +C ++ +MEKE + R+ C
Sbjct: 390 RCSVLKEELKQEDAHRELRE---AQEKELKLCKTQIQDMEKE-----MKKLRAELRKSCT 441
Query: 839 TGNITS--VEESSWVITEYQKATSKLDLQLGMLPTDKTVFSEN 879
++ S + E S V + Q+ + + LQL + ++V N
Sbjct: 442 EQSVISRTLREKSKVEEKLQEDSRRKLLQLQEMGNRESVIKIN 484
>gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo sapiens]
Length = 1906
Score = 35.8 bits (81), Expect = 0.23
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 13/146 (8%)
Query: 367 TDLFQRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLGDTSSDE 426
+DL SLS + EK G DC+ E+T + P L +S
Sbjct: 947 SDLGYNSLSKDEVRRGDTSTEDIQEEKDKKGSDCSSLSESESTKGSADCLPKLSYQNSSS 1006
Query: 427 LVQLHTGSKEVLDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEGGAKNIEVKDLGCLR 486
+V+L TG+ +++A G P + L+ +L +E +NI+ + C R
Sbjct: 1007 IVRL-TGTS---NNSAGKISGESMESTP----ELLLISSLEDTNE--TRNIQSR---CFR 1053
Query: 487 RDFHSDTSACLKESTEEGSSKEDYYG 512
+ SD L++ G+ + G
Sbjct: 1054 KRHKSDNETNLQQQVVWGNRNRNLSG 1079
>gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo sapiens]
Length = 1863
Score = 35.8 bits (81), Expect = 0.23
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 13/146 (8%)
Query: 367 TDLFQRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLGDTSSDE 426
+DL SLS + EK G DC+ E+T + P L +S
Sbjct: 904 SDLGYNSLSKDEVRRGDTSTEDIQEEKDKKGSDCSSLSESESTKGSADCLPKLSYQNSSS 963
Query: 427 LVQLHTGSKEVLDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEGGAKNIEVKDLGCLR 486
+V+L TG+ +++A G P + L+ +L +E +NI+ + C R
Sbjct: 964 IVRL-TGTS---NNSAGKISGESMESTP----ELLLISSLEDTNE--TRNIQSR---CFR 1010
Query: 487 RDFHSDTSACLKESTEEGSSKEDYYG 512
+ SD L++ G+ + G
Sbjct: 1011 KRHKSDNETNLQQQVVWGNRNRNLSG 1036
>gi|41393608 reticulon 3 isoform b [Homo sapiens]
Length = 1013
Score = 35.8 bits (81), Expect = 0.23
Identities = 79/354 (22%), Positives = 137/354 (38%), Gaps = 69/354 (19%)
Query: 739 STPESMSAREKAIIAKLPQETARSDRPI-----EVKETAFDPHEGRNDDSHYTLCQRDTV 793
STP + S + A A L QE A + +P+ KE + +G Q DT+
Sbjct: 376 STPITKSTGDWAE-ASLQQENAITGKPVPDSLNSTKEFSIKGVQGNMQK------QDDTL 428
Query: 794 GVIYDNDFEKESRLG--ICNVRV----DEMEKEETMSMYNPRKTHDREKCGTGNITSVEE 847
+ + EK LG + V+V D ++ E + + + G + T +E+
Sbjct: 429 AELPGSPPEKCDSLGSGVATVKVVLPDDHLKDEMDWQSSALGEITEADSSGESDDTVIED 488
Query: 848 SSWVITEYQKATSKLDLQLGMLPTDKTVFSENRDLRQVQ--ELSKKTD-------SDAIV 898
+ + +K+ + + V + R+++++ E +KT SD+ +
Sbjct: 489 ---ITADTSFENNKIQAEKPVSIPSAVVKTGEREIKEIPSCEREEKTSKNFEELVSDSEL 545
Query: 899 HSAFNSDTNRAPQNSSPFSK-HHTEISVSTNEQAIAVENAVTTMASQPISTKSENICNST 957
H R+P + + SK T +S+ + +A E +TT + ST S N+ N T
Sbjct: 546 HQDQPDILGRSPASEAACSKVPDTNVSLEDVSE-VAPEKPITTENPKLPSTVSPNVFNET 604
Query: 958 REIQGIEKHPYPE------------SKPEEV------SRSSGIVTSGSRKERCIGQIFQT 999
+ Y E S PE++ +R GIV S + I +
Sbjct: 605 EFSLNVTTSAYLESLHGKNVKHIDDSSPEDLIAAFTETRDKGIVDSERNAFKAI-----S 659
Query: 1000 EEYSVEKSLGPMILINKPLENMEEARHENEGLVSSGQSLYTSGEKESDSSASTS 1053
E+ + K+ P+ E HENE S G + G K S+ S T+
Sbjct: 660 EKMTDFKTTPPV-----------EVLHENE---SGGSEIKDIGSKYSEQSKETN 699
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 35.8 bits (81), Expect = 0.23
Identities = 57/289 (19%), Positives = 108/289 (37%), Gaps = 32/289 (11%)
Query: 238 PEPVKPWKEVPNRQIKGCLKVKSSKEESSVTSEENNFENPKNTDTYIPTIICSHEDKEDL 297
P PVK K+ +++ K + SS + + + ++ SH +
Sbjct: 128 PSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHR 187
Query: 298 -----EASNRNVKDVNREHDEHNEKELELMINQHLIRTRSTASRDERNTFSTDPVNFPNK 352
++S H + +E + +H R T +D S+ P + P +
Sbjct: 188 CPSRSQSSESRPSSCESRHRGRSPEEGQKSRRRHSRRCSKTLCKDSPEAQSSRPPSQPLQ 247
Query: 353 AEGLEKKQ--IHGE-ICTDLFQRSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETT 409
G + I G DLF ++ SP +++ +++Y SG+D + PS +T+
Sbjct: 248 MLGYLSARGVITGSGSAADLFTKTASPLTTSRGR-------SQEYDSGNDTSSPPSTQTS 300
Query: 410 S--NMGEIK--PSLGDTSSDELVQLHTGSKEVLDDNANPAHGNGTVQIPCPSSDQLMAGN 465
S + G+ K PS G + S EL ++ N + + P + M N
Sbjct: 301 SARSRGQEKGSPSGGLSKSREL------------NSGNTSDSGNSFTTSSPQNKGAMLEN 348
Query: 466 LNKKHEG-GAKNIEVKDLGCLRRDFHSDTSACLKESTEEGSSKEDYYGN 513
L+ G ++ + L C S + + S +G S+ Y +
Sbjct: 349 LSPTSRGRESRGFQSPCLECAEVKKSSLVPSTARSSPMKGCSRSSSYAS 397
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 35.4 bits (80), Expect = 0.31
Identities = 43/203 (21%), Positives = 77/203 (37%), Gaps = 43/203 (21%)
Query: 878 ENRD-LRQVQELSKKTDSDAIVHSAFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVEN 936
E++D L+ + + T+S +SD + S FS+ T S +E E
Sbjct: 1582 EDKDYLKLTLDQEEATESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEE 1641
Query: 937 AVTTMASQPISTKSEN--------------ICNSTREIQGIEKHPYPESKPEEVSRSSGI 982
+ T + + ST+SE + +E++G ++ P E K ++
Sbjct: 1642 SSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKEEPQEEQKEPKM------ 1695
Query: 983 VTSGSRKERCIGQIFQTEEYSVEKSLGPMILINKPLENMEEARHENEGLVSSGQSLYTSG 1042
+ EE+S E+ GP P+E + ++ S +S G
Sbjct: 1696 ---------------EEEEHSEEEESGP-----APVEESTDPEAQDIPEEGSAESASVEG 1735
Query: 1043 --EKESDSSASTSLPVEESQAQG 1063
E E +S + +S ESQ+ G
Sbjct: 1736 GVESEEESESGSSSSSSESQSGG 1758
>gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo
sapiens]
Length = 1188
Score = 34.7 bits (78), Expect = 0.52
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 760 ARSDRPIEVKETAFDPHEGRNDDSHYTLCQRDTVGVIYDNDFEKESRLGICNVRVDEMEK 819
+ SD IEV A + EG LC+R++ N FE G C++ V E E
Sbjct: 1021 SESDITIEVDSIAEESQEG--------LCERESA-----NGFETNVASGTCSIIVQERES 1067
Query: 820 EE---------------TMSMYNPRKTH---DREKCGT---GNITSVEESSWVITEYQKA 858
E P++T EK GT N+ S E S++ + Q
Sbjct: 1068 REKGQKRPSDGNSGLMAKKQKRTPKRTSAAAKNEKNGTDELDNMNSTERISFLQEKLQ-- 1125
Query: 859 TSKLDLQLGMLPTDKTVFSENRDLRQVQELSKKTDSDAIVHSAFNSDTNRAPQNSSP 915
+++ + V + +R +++++ ++ S+ +SDT +P +SSP
Sbjct: 1126 ----EIRKYYMSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMSPSSSSP 1178
>gi|39812492 TH1-like protein [Homo sapiens]
Length = 590
Score = 34.3 bits (77), Expect = 0.68
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 105 VLAPLFDLPSSKEDLMQQLQIQKAILESTESLLGSTSIKGIIRVLNVSFEKLVYVRMSLD 164
+L LF+ S+ D+M+QL+++K +L+ LL + ++ Y+R L+
Sbjct: 472 LLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVS----------YIRKCLE 521
Query: 165 DWQTHYDILAEYVPNSCDGETDQFSFKIVLVPPYQKD 201
T ++ +V D V+ PPY D
Sbjct: 522 KLDTDISLIRYFVTEVLD----------VIAPPYTSD 548
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 34.3 bits (77), Expect = 0.68
Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 38/213 (17%)
Query: 889 SKKTDSDAIVHSAFNSDTNRAPQNSSPFSKHHTEISVSTNEQAIAVENAVTTMASQPIST 948
S KT+ V + +D R P + S ++ H +S E+ + V + T QP+ST
Sbjct: 1895 STKTERHPPVSPSGKTD-KRPPVSPSGRTEKHPPVSPGRTEKRLPVSPSGRTDKHQPVST 1953
Query: 949 KSENICNSTREIQG-IEKHP--YPESKPEEVSRS--------------------SGIVTS 985
+ + G EK P P SK E + + +G+
Sbjct: 1954 AGKTEKHLPVSPSGKTEKQPPVSPTSKTERIEETMSVRELMKAFQSGQDPSKHKTGLFEH 2013
Query: 986 GSRKERCIGQIFQTEEYSVEKSLGPMILINKPLENMEEARHENEGLVSSGQSLYTSGEKE 1045
S K++ Q + + VEK GP++ EA+ + GQ L +G E
Sbjct: 2014 KSAKQK---QPQEKGKVRVEKEKGPIL-------TQREAQKTENQTIKRGQRLPVTGTAE 2063
Query: 1046 SDSSAS-TSLPVEESQAQGNESLFSKYTNSKIP 1077
S +S+ V++ A G + K + KIP
Sbjct: 2064 SKRGVRVSSIGVKKEDAAGGK---EKVLSHKIP 2093
>gi|4505121 methyl-CpG binding domain protein 4 [Homo sapiens]
Length = 580
Score = 33.9 bits (76), Expect = 0.89
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 17/170 (10%)
Query: 230 ICQKKEQEPEPVKPWKEVPNRQIKGCLKVKSSKEES-SVTSEENNFENPKNTDTYIPTII 288
+C K + E EPV ++ +R + C+ + E+ SVTSEEN+ K +
Sbjct: 267 VCNKADAESEPVAQKSQL-DRTV--CISDAGACGETLSVTSEENSLVKKKERSLSSGSNF 323
Query: 289 CSHEDKEDLEASNRNVKDVNREHDEHNEKELELMINQHLIRTRSTASRDERNTFSTDPVN 348
CS + + + KD EHNEK + + I T+ + + TD +
Sbjct: 324 CSEQKTSGIINKFCSAKD-----SEHNEKYEDTFLESEEIGTKVEVV-ERKEHLHTDILK 377
Query: 349 FPNKAE---GLEKKQIHGEICTDLFQRSLSPSSSAESSVKGDFYCNEKYS 395
++ + +K GE +FQ P + E K Y + KY+
Sbjct: 378 RGSEMDNNCSPTRKDFTGE---KIFQEDTIPRTQIERR-KTSLYFSSKYN 423
>gi|13376834 zinc finger and SCAN domain containing 16 [Homo
sapiens]
Length = 348
Score = 33.9 bits (76), Expect = 0.89
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 536 TILHDQERKMGNPKISVAGIGASNRDLATLLSEHTAIPTRAITADVSHSPRTNLSWEEAV 595
T+L D ER++ P V G + RD+ P ++T + H +T L E
Sbjct: 114 TVLEDLERELDEPGKQVPG-NSERRDILMDKLAPLGRPYESLTVQL-HPKKTQLEQEAG- 170
Query: 596 LTPEHHHLTSEGSALGGITGQVCSSRTGNVLRNDYLFQVEEKSGGINSEDQDNSPQHKQS 655
P+ + G ++ + + + + + +E G IN ++PQH +S
Sbjct: 171 -KPQRN-------------GDKTRTKNEELFQKEDMPKDKEFLGEINDRLNKDTPQHPKS 216
Query: 656 WNVLESQGKS 665
+++E++G+S
Sbjct: 217 KDIIENEGRS 226
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 33.9 bits (76), Expect = 0.89
Identities = 95/458 (20%), Positives = 159/458 (34%), Gaps = 76/458 (16%)
Query: 253 KGCLKVKSSKEESSVTSEENNFENPKNTDTYIPTIICSHEDKEDLEASNRNVKDVNREHD 312
K C+K +S+ SE + E PK T P+ E EA DV+ D
Sbjct: 443 KSCIKAAASQGAEKTVSEVS--EQPKETSMTEPS-----EPGSKAEAKKALGGDVS---D 492
Query: 313 EHNEKELELMINQHLIRTRSTASRDERNTFSTDPVNFPNKAEGLEKKQIHGEICTDL-FQ 371
+ E + + + + S+ + P G + + T L +
Sbjct: 493 QSLESHSQKVSETQMCESNSSKETSLATPAGKESQEGPKHPTGPFFPVLSKDESTALQWP 552
Query: 372 RSLSPSSSAESSVKGDFYCNEKYSSGDDCTHQPSEETTSNMGEIKPSLGDTSSDELVQLH 431
L + AE S+ + CN Y D +++ + E +G +S D L L
Sbjct: 553 SELLIFTKAEPSIS--YSCNPLYF---DFKLSRNKDARTKGTEKPKDIGSSSKDHLQGLD 607
Query: 432 TG----SKEVLDDNANPAHGNGTVQIPCPSSDQLMAGNLNKKHEGGAKNIEVKDLG---- 483
G SKEV + + G ++ P+S +G LNK+ GG+ E +D G
Sbjct: 608 PGEPNKSKEVGGEKIVRSSGG---RMDAPASGSACSG-LNKQEPGGSHGSETEDTGRSLP 663
Query: 484 -----------CLRRDFHSDTSACL---KESTEEGSSKEDYYGNGKDDEEQRIYLGVNEK 529
++ H +S K TEE SSK + +G+ ++++ K
Sbjct: 664 SKKERSGKSHRHKKKKKHKKSSKHKRKHKADTEEKSSKAE---SGEKSKKRK-----KRK 715
Query: 530 QRKNFQTILHDQERKMGNPKISVAGIGASNRDLATLLSEHTAIPTRAITADVSHSPRTNL 589
++KN + D ER PK G G + P R S R +L
Sbjct: 716 RKKNKSSAPADSER---GPKPEPPGSG-------------SPAPPRRRRRAQDDSQRRSL 759
Query: 590 SWEEAVLTPEHHHLTSEGSA-------LGGITGQVCSSRTGNVLRNDYLFQVEEKSGGIN 642
EE + S G + C R G + + + SG
Sbjct: 760 PAEEGSSGKKDEGGGGSSSQDHGGRKHKGELPPSSCQRRAGTKRSSRSSHRSQPSSG--- 816
Query: 643 SEDQDNSPQHKQSWNVLESQGKSRENKTNITEHIKGQT 680
ED D++ H+ + E + + +EH + ++
Sbjct: 817 DEDSDDASSHRLHQKSPSQYSEEEEEEDSGSEHSRSRS 854
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 33.9 bits (76), Expect = 0.89
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 845 VEESSWVITEYQKATSKLDLQLGML------PTDKT--VFSENRDLRQVQELSKKT---- 892
V E ++ +E A + DL + L P+ KT F + R LR+ ++ + T
Sbjct: 550 VSEITFPHSEISNAVKRTDLTINCLAEGASSPSPKTNNAFPQQRILREARKCLQTTPTTH 609
Query: 893 --DSDAIVHSAFNSDTNRAPQNSSPFSK--HHTEISVSTNEQAIAVENAVTTMASQPIST 948
D++ I N+D++ A NS +SK H E + E A+ +T
Sbjct: 610 CADNNTIAARFLNNDSSGAEANSEKYSKILHCPEFATDLPSSQTDPE----VNAAGAAAT 665
Query: 949 KSENICNST 957
K+EN C T
Sbjct: 666 KAENPCTDT 674
>gi|123173752 synaptotagmin XIV-like [Homo sapiens]
Length = 645
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 857 KATSKLDLQLGMLPTDKTVFS-ENRDLRQVQELSKKTDSDAIVHSAFNSDTNRAPQNSSP 915
K + KLD L + +T F E +D QE + + S NSD + QNSSP
Sbjct: 48 KLSDKLDQDLDNIQIQETYFEDEEQDNDWSQEDANSLFLEVDHFSCCNSDLQDSAQNSSP 107
Query: 916 FSKHHTEISVSTNEQ 930
H + S ST Q
Sbjct: 108 SLSQHAKDSCSTMSQ 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,343,806
Number of Sequences: 37866
Number of extensions: 2115550
Number of successful extensions: 5706
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 5578
Number of HSP's gapped (non-prelim): 181
length of query: 1122
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1009
effective length of database: 13,968,660
effective search space: 14094377940
effective search space used: 14094377940
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.