Guide to the Human Genome
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Name: DENND4A Sequence: fasta or formatted (1906aa) NCBI GI: 221307568
Description:

DENN/MADD domain containing 4A isoform 1

Referenced in:

Myc and Related Functions
Additional Interaction Domain Families

Other entries for this name:
alt prot [1863aa] DENN/MADD domain containing 4A isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         91           2
 C cysteine            2.5         47           1
 D aspartate           6.3        120           3
 E glutamate           5.6        106           5
 F phenylalanine       3.9         75           2
 G glycine             4.5         86           2
 H histidine           2.2         42           2
 I isoleucine          4.9         94           3
 K lysine              6.6        126           2
 L leucine             9.9        188           3
 M methionine          2.3         44           2
 N asparagine          4.4         84           2
 P proline             6.6        126           3
 Q glutamine           3.7         70           3
 R arginine            4.9         93           2
 S serine             11.6        222           3
 T threonine           5.9        112           2
 V valine              5.3        101           2
 W tryptophan          1.0         20           1
 Y tyrosine            3.1         59           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DENN/MADD domain containing 4A isoform 1 
DENND4A               0.972   DENN/MADD domain containing 4A isoform 2 
DENND4C               0.332   DENN/MADD domain containing 4C 
DENND4B               0.265   DENN/MADD domain containing 4B 
SBF2                  0.029   SET binding factor 2 
DENND5B               0.028   DENN/MADD domain containing 5B 
DENND5A               0.027   RAB6 interacting protein 1 
SBF1                  0.026   SET binding factor 1 
DENND2D               0.017   DENN/MADD domain containing 2D 
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing protei...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
MADD                  0.017   MAP-kinase activating death domain-containing prote...
DENND2A               0.016   DENN/MADD domain containing 2A 
DENND1B               0.015   DENN/MADD domain containing 1B isoform 1 
ST5                   0.014   suppression of tumorigenicity 5 isoform 1 
ST5                   0.014   suppression of tumorigenicity 5 isoform 1 
ST5                   0.014   suppression of tumorigenicity 5 isoform 2 
DENND2C               0.014   DENN/MADD domain containing 2C 
DENND1A               0.014   DENN/MADD domain containing 1A isoform 2 
DENND1A               0.014   DENN/MADD domain containing 1A isoform 1 
DENND3                0.013   DENN/MADD domain containing 3 
DENND1B               0.013   DENN/MADD domain containing 1B isoform 2 
DENND1C               0.010   DENN/MADD domain containing 1C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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