Guide to the Human Genome
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Name: PPP1R3F Sequence: fasta or formatted (799aa) NCBI GI: 58761532
Description:

protein phosphatase 1, regulatory (inhibitor) subunit 3F

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         83           4
 C cysteine            1.4         11           1
 D aspartate           5.3         42           3
 E glutamate           8.6         69           5
 F phenylalanine       1.9         15           1
 G glycine            12.6        101           6
 H histidine           1.4         11           1
 I isoleucine          1.8         14           1
 K lysine              1.9         15           2
 L leucine            10.1         81           2
 M methionine          1.5         12           1
 N asparagine          1.5         12           2
 P proline            11.8         94           3
 Q glutamine           3.6         29           4
 R arginine            5.3         42           3
 S serine              7.4         59           2
 T threonine           4.3         34           1
 V valine              7.0         56           3
 W tryptophan          1.5         12           1
 Y tyrosine            0.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory (inhibitor) subuni... 
LOC100293149          0.837   PREDICTED: similar to protein phosphatase 1, regula...
PPP1R3A               0.034   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R3B               0.018   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R3G               0.018   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R3D               0.015   protein phosphatase 1, regulatory subunit 3D 
PPP1R3C               0.014   protein phosphatase 1, regulatory (inhibitor) subunit...
SH3BP1                0.014   SH3-domain binding protein 1 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.013   PREDICTED: hypothetical protein LOC80164 
LMTK3                 0.012   lemur tyrosine kinase 3 
PPP1R13L              0.012   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.012   protein phosphatase 1, regulatory subunit 13 like [H...
GPATCH8               0.011   G patch domain containing 8 
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.011   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
AUTS2                 0.010   autism susceptibility candidate 2 isoform 2 
AUTS2                 0.010   autism susceptibility candidate 2 isoform 1 
SFPQ                  0.010   splicing factor proline/glutamine rich (polypyrimidin...
POU3F1                0.010   POU domain, class 3, transcription factor 1 
GRIN2D                0.009   N-methyl-D-aspartate receptor subunit 2D precursor ...
FAM9A                 0.009   family with sequence similarity 9, member A 
FAM108A5              0.009   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.009   PREDICTED: family with sequence similarity 108, mem...
FAM108A5              0.009   PREDICTED: hypothetical protein LOC729495 
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 2 
RXRB                  0.009   retinoid X receptor, beta 
KDM4B                 0.009   jumonji domain containing 2B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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