RAB11FIP1 31613

Name: RAB11FIP1	Sequence: fasta or formatted (612aa)		NCBI GI: 50363230
Description: RAB11 family interacting protein 1 isoform 2		Referenced in: Rab
Other entries for this name: alt prot [649aa] RAB11 family interacting protein 1 isoform 1 alt prot [1283aa] RAB11 family interacting protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 52 2 C cysteine 1.0 6 1 D aspartate 5.7 35 2 E glutamate 10.3 63 3 F phenylalanine 2.3 14 1 G glycine 7.4 45 2 H histidine 2.3 14 2 I isoleucine 2.3 14 2 K lysine 5.7 35 2 L leucine 9.0 55 3 M methionine 2.5 15 2 N asparagine 2.5 15 2 P proline 9.2 56 3 Q glutamine 4.2 26 1 R arginine 3.4 21 1 S serine 11.9 73 3 T threonine 5.2 32 2 V valine 5.6 34 2 W tryptophan 0.3 2 1 Y tyrosine 0.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAB11 family interacting protein 1 isoform 2 RAB11FIP1 0.998 RAB11 family interacting protein 1 isoform 3 RAB11FIP1 0.165 RAB11 family interacting protein 1 isoform 1 RAB11FIP2 0.050 RAB11 family interacting protein 2 (class I) RAB11FIP5 0.040 RAB11 family interacting protein 5 (class I) MAP1S 0.019 BPY2 interacting protein 1 RLTPR 0.017 RGD motif, leucine rich repeats, tropomodulin domain... NEFH 0.016 neurofilament, heavy polypeptide 200kDa EFS 0.016 embryonal Fyn-associated substrate isoform 1 TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform c ... PRAGMIN 0.015 pragmin PCLO 0.014 piccolo isoform 2 PCLO 0.014 piccolo isoform 1 MLL2 0.014 myeloid/lymphoid or mixed-lineage leukemia 2 NOLC1 0.013 nucleolar and coiled-body phosphoprotein 1 AFF1 0.013 myeloid/lymphoid or mixed-lineage leukemia trithorax ... SEC24C 0.013 SEC24-related protein C SEC24C 0.013 SEC24-related protein C MUC12 0.013 PREDICTED: mucin 12 MUC12 0.013 PREDICTED: mucin 12, cell surface associated RP1L1 0.013 retinitis pigmentosa 1-like 1 LOC100134663 0.012 PREDICTED: hypothetical protein, partial NACAD 0.012 PREDICTED: NAC alpha domain containing NACAD 0.012 PREDICTED: NAC alpha domain containing NACAD 0.012 PREDICTED: NAC alpha domain containing CCDC6 0.012 coiled-coil domain containing 6 NACAD 0.012 NAC alpha domain containing Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.