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Search of human proteins with 16753212
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16753212 src kinase associated phosphoprotein 2 [Homo
sapiens]
(359 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16753212 src kinase associated phosphoprotein 2 [Homo sapiens] 742 0.0
gi|115527074 src kinase associated phosphoprotein 1 isoform 1 [H... 295 6e-80
gi|115527076 src kinase associated phosphoprotein 1 isoform 2 [H... 293 2e-79
gi|93102364 SWAP-70 protein [Homo sapiens] 53 4e-07
gi|11321634 CD2-associated protein [Homo sapiens] 52 8e-07
gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens] 52 1e-06
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 51 1e-06
gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens] 51 1e-06
gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens] 51 1e-06
gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens] 51 1e-06
gi|110349763 cytohesin 1 isoform 2 [Homo sapiens] 51 1e-06
gi|4758964 cytohesin 1 isoform 1 [Homo sapiens] 51 1e-06
gi|194733753 phosphoinositide-binding protein PIP3-E isoform 1 [... 50 3e-06
gi|194733747 phosphoinositide-binding protein PIP3-E isoform 1 [... 50 3e-06
gi|40354212 phosphoinositide-binding protein PIP3-E isoform 2 [H... 50 3e-06
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 50 4e-06
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 50 4e-06
gi|154354979 myosin X [Homo sapiens] 49 5e-06
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 49 7e-06
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 49 7e-06
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 49 7e-06
gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Ho... 49 7e-06
gi|189491778 nephrocystin 1 isoform 4 [Homo sapiens] 49 9e-06
gi|189491776 nephrocystin 1 isoform 3 [Homo sapiens] 49 9e-06
gi|189491774 nephrocystin 1 isoform 2 [Homo sapiens] 49 9e-06
gi|46397398 nephrocystin 1 isoform 1 [Homo sapiens] 49 9e-06
gi|4758968 cytohesin 3 [Homo sapiens] 48 2e-05
gi|188497618 connector enhancer of kinase suppressor of Ras 1 [H... 48 2e-05
gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 47 2e-05
gi|182765466 FCH and double SH3 domains 2 [Homo sapiens] 47 2e-05
>gi|16753212 src kinase associated phosphoprotein 2 [Homo sapiens]
Length = 359
Score = 742 bits (1916), Expect = 0.0
Identities = 359/359 (100%), Positives = 359/359 (100%)
Query: 1 MPNPSSTSSPYPLPEEIRNLLADVETFVADILKGENLSKKAKEKRESLIKKIKDVKSIYL 60
MPNPSSTSSPYPLPEEIRNLLADVETFVADILKGENLSKKAKEKRESLIKKIKDVKSIYL
Sbjct: 1 MPNPSSTSSPYPLPEEIRNLLADVETFVADILKGENLSKKAKEKRESLIKKIKDVKSIYL 60
Query: 61 QEFQDKGDAEDGEEYDDPFAGPPDTISLASERYDKDDEAPSDGAQFPPIAAQDLPFVLKA 120
QEFQDKGDAEDGEEYDDPFAGPPDTISLASERYDKDDEAPSDGAQFPPIAAQDLPFVLKA
Sbjct: 61 QEFQDKGDAEDGEEYDDPFAGPPDTISLASERYDKDDEAPSDGAQFPPIAAQDLPFVLKA 120
Query: 121 GYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKD 180
GYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKD
Sbjct: 121 GYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKD 180
Query: 181 GKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIPEDYDERGELYDDV 240
GKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIPEDYDERGELYDDV
Sbjct: 181 GKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIPEDYDERGELYDDV 240
Query: 241 DHPLPISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYAN 300
DHPLPISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYAN
Sbjct: 241 DHPLPISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYAN 300
Query: 301 FYQGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYIMEMYDI 359
FYQGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYIMEMYDI
Sbjct: 301 FYQGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYIMEMYDI 359
>gi|115527074 src kinase associated phosphoprotein 1 isoform 1 [Homo
sapiens]
Length = 359
Score = 295 bits (754), Expect = 6e-80
Identities = 159/369 (43%), Positives = 224/369 (60%), Gaps = 40/369 (10%)
Query: 13 LPEEIRNLLADVETFVADILKGENLSKKAKEKRESLIKKIKDVKSIYLQEFQDKGDAEDG 72
LPEEIR LL D E F+A+ L+ ENLS A++ R+ +++ + +K+ Y +FQ +G
Sbjct: 6 LPEEIRWLLEDAEEFLAEGLRNENLSAVARDHRDHILRGFQQIKARYYWDFQPQGGDIGQ 65
Query: 73 EEYDDPFAGPPDTISLASER---YDKDDEAPSDGAQFPPIAAQDLPFVLKAGYLEKRRKD 129
+ DD +G +SL S+ D DE D + AQ+L V+K GYLEK+ KD
Sbjct: 66 DSSDDNHSGTLG-LSLTSDAPFLSDYQDEGMEDIVK----GAQELDNVIKQGYLEKKSKD 120
Query: 130 HSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKDGKKDCCFEI 189
HSF G EWQKRWC +S+ +FYYY ++K KQ KG F I GY VRM LR+D KK+ CFE+
Sbjct: 121 HSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYGVRMAPHLRRDSKKESCFEL 180
Query: 190 SAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIP----EDYDERGELYDDVD---- 241
++ D+R Y+FTA SP +A +WV Q+ F+L+D+ S IP E+ +E+ E YDD+D
Sbjct: 181 TSQDRRSYEFTATSPAEARDWVDQISFLLKDLSSLTIPYEEDEEEEEKEETYDDIDGFDS 240
Query: 242 -------HPLPISNPLTSSQPI----DDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHT 290
P + + +P +++IYE LP+EE D +EE ++
Sbjct: 241 PSCGSQCRPTILPGSVGIKEPTEEKEEEDIYEVLPDEEHD-----LEEDESGTR------ 289
Query: 291 SGDKSTDYANFYQGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPK 350
K DYA++YQGLWDC G DELSF+RGD+I ILSKEYN YGWWVGE+ +G+VPK
Sbjct: 290 --RKGVDYASYYQGLWDCHGDQPDELSFQRGDLIRILSKEYNMYGWWVGELNSLVGIVPK 347
Query: 351 AYIMEMYDI 359
Y+ +++
Sbjct: 348 EYLTTAFEV 356
>gi|115527076 src kinase associated phosphoprotein 1 isoform 2 [Homo
sapiens]
Length = 358
Score = 293 bits (750), Expect = 2e-79
Identities = 158/369 (42%), Positives = 224/369 (60%), Gaps = 41/369 (11%)
Query: 13 LPEEIRNLLADVETFVADILKGENLSKKAKEKRESLIKKIKDVKSIYLQEFQDKGDAEDG 72
LPEEIR LL D E F+A+ L+ ENLS A++ R+ +++ + +K+ Y +FQ +G
Sbjct: 6 LPEEIRWLLEDAEEFLAEGLRNENLSAVARDHRDHILRGFQQIKARYYWDFQPQGGDIGQ 65
Query: 73 EEYDDPFAGPPDTISLASER---YDKDDEAPSDGAQFPPIAAQDLPFVLKAGYLEKRRKD 129
+ DD +G +SL S+ D DE D + AQ+L V+K GYLEK+ KD
Sbjct: 66 DSSDDNHSGTLG-LSLTSDAPFLSDYQDEGMEDIVK----GAQELDNVIKQGYLEKKSKD 120
Query: 130 HSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKDGKKDCCFEI 189
HSF G EWQKRWC +S+ +FYYY ++K KQ KG F I GY VRM LR+D KK+ CFE+
Sbjct: 121 HSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYGVRMAPHLRRDSKKESCFEL 180
Query: 190 SAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIP----EDYDERGELYDDVD---- 241
++ D+R Y+FTA SP +A +WV Q+ F+L+D+ S IP E+ +E+ E YDD+D
Sbjct: 181 TSQDRRSYEFTATSPAEARDWVDQISFLLKDLSSLTIPYEEDEEEEEKEETYDDIDGFDS 240
Query: 242 -------HPLPISNPLTSSQPI----DDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHT 290
P + + +P +++IYE LP+EE D +EE ++
Sbjct: 241 PSCGSQCRPTILPGSVGIKEPTEEKEEEDIYEVLPDEEHD-----LEEDESGTR------ 289
Query: 291 SGDKSTDYANFYQGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPK 350
+ DYA++YQGLWDC G DELSF+RGD+I ILSKEYN YGWWVGE+ +G+VPK
Sbjct: 290 ---RKGDYASYYQGLWDCHGDQPDELSFQRGDLIRILSKEYNMYGWWVGELNSLVGIVPK 346
Query: 351 AYIMEMYDI 359
Y+ +++
Sbjct: 347 EYLTTAFEV 355
>gi|93102364 SWAP-70 protein [Homo sapiens]
Length = 585
Score = 53.1 bits (126), Expect = 4e-07
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 117 VLKAGYLEK---RRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRM 173
VLK GY+ K RRK+ W +RW L + YY S+ K +KG+ +D + +
Sbjct: 211 VLKQGYMMKKGHRRKN-------WTERWFVLKPNIISYYVSEDLKDKKGDILLD-ENCCV 262
Query: 174 NNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIP---EDY 230
+ KDGKK C F + DK ++ +A+ K +EW+Q + + ++ P E
Sbjct: 263 ESLPDKDGKK-CLFLVKCFDK-TFEISASDKKKKQEWIQAIHSTIHLLKLGSPPPHKEAR 320
Query: 231 DERGEL-YDDVDHPLPISNPLTSSQPIDDEIYEELP---EEEEDSAPVKVEEQRKMSQDS 286
R EL + + + Q ++ +EL ++ E++A EE++K Q
Sbjct: 321 QRRKELRKKQLAEQEELERQMKELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQ 380
Query: 287 V 287
V
Sbjct: 381 V 381
>gi|11321634 CD2-associated protein [Homo sapiens]
Length = 639
Score = 52.0 bits (123), Expect = 8e-07
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 266 EEEEDSAPVKVEEQRKMSQD-SVHHTSGDKSTDYANFYQGLWDCTGAFSDELSFKRGDVI 324
EE++ P+ ++ +Q + T + + + L+ G DEL+FK G++I
Sbjct: 237 EEKKPEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEII 296
Query: 325 YILSKEYNRYGWWVGEMKGAIGLVPKAYIMEMYDI 359
+++SKE GWW GE+ G G+ P + +++ ++
Sbjct: 297 HLISKETGEAGWWRGELNGKEGVFPDNFAVQINEL 331
Score = 36.2 bits (82), Expect = 0.047
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 314 DELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYIMEM 356
DEL K GD+I I E GWW G + +GL P ++ E+
Sbjct: 125 DELELKVGDIIDI--NEEVEEGWWSGTLNNKLGLFPSNFVKEL 165
Score = 32.0 bits (71), Expect = 0.88
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 306 WDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYIMEM 356
+D DEL+ + G++I + K+ GW GE+ G G+ P ++ E+
Sbjct: 8 YDYDAVHDDELTIRVGEIIRNV-KKLQEEGWLEGELNGRRGMFPDNFVKEI 57
>gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens]
Length = 845
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 273 PVKVEEQRKMSQDSVHHTSGDKSTDYANFYQGLWDCTGAFSDELSFKRGDVIYILSKEYN 332
P K E+R +S+ +V ST Y + +D ELS K GD+I IL+K+
Sbjct: 764 PFKEPEKRTISRPAVG------STKYFGTAKARYDFCARDRSELSLKEGDIIKILNKK-G 816
Query: 333 RYGWWVGEMKGAIGLVPKAYIMEMY 357
+ GWW GE+ G +G P Y+ E Y
Sbjct: 817 QQGWWRGEIYGRVGWFPANYVEEDY 841
Score = 29.3 bits (64), Expect = 5.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 223 SDIIPEDYDERGELYDDVDHPLPISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRK 281
SD I + +E +LYD V++ + DEIYE+L E S P K+ E K
Sbjct: 146 SDQIDDTVEEDEDLYDCVEN----------EEAEGDEIYEDLMRSEPVSMPPKMTEYDK 194
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 51.2 bits (121), Expect = 1e-06
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 117 VLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNT 176
V KAGYL K+ L +W R+ + K YY+ S +G F++ GY+ M
Sbjct: 84 VAKAGYLHKKGGTQLQL-LKWPLRFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAA 142
Query: 177 LRKDGKKDCCFEISAPDK--RIYQFTAASPKDAEEWVQQLKFVLQDM-ESDIIPEDYDER 233
F+I K R + F+A+S ++ + W+ L+ + E +P D +
Sbjct: 143 EETTSNNVFPFKIIHISKKHRTWFFSASSEEERKSWMALLRREIGHFHEKKDLPLDTSDS 202
Query: 234 G----ELYDDVDHPLPISNPLTSSQPIDDEIYEELPEEEEDS 271
Y V+ P+ IS S P D+E YE ++E+DS
Sbjct: 203 SSDTDSFYGAVERPVDIS---LSPYPTDNEDYEH--DDEDDS 239
>gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens]
Length = 589
Score = 51.2 bits (121), Expect = 1e-06
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 117 VLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNT 176
V KAGYL K+ L +W R+ + K YY+ S +G F++ GY+ M
Sbjct: 55 VAKAGYLHKKGGTQLQL-LKWPLRFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAA 113
Query: 177 LRKDGKKDCCFEISAPDK--RIYQFTAASPKDAEEWVQQLKFVLQDM-ESDIIPEDYDER 233
F+I K R + F+A+S ++ + W+ L+ + E +P D +
Sbjct: 114 EETTSNNVFPFKIIHISKKHRTWFFSASSEEERKSWMALLRREIGHFHEKKDLPLDTSDS 173
Query: 234 G----ELYDDVDHPLPISNPLTSSQPIDDEIYEELPEEEEDS 271
Y V+ P+ IS S P D+E YE ++E+DS
Sbjct: 174 SSDTDSFYGAVERPVDIS---LSPYPTDNEDYEH--DDEDDS 210
>gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 51.2 bits (121), Expect = 1e-06
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 117 VLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNT 176
V KAGYL K+ L +W R+ + K YY+ S +G F++ GY+ M
Sbjct: 27 VAKAGYLHKKGGTQLQL-LKWPLRFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAA 85
Query: 177 LRKDGKKDCCFEISAPDK--RIYQFTAASPKDAEEWVQQLKFVLQDM-ESDIIPEDYDER 233
F+I K R + F+A+S ++ + W+ L+ + E +P D +
Sbjct: 86 EETTSNNVFPFKIIHISKKHRTWFFSASSEEERKSWMALLRREIGHFHEKKDLPLDTSDS 145
Query: 234 G----ELYDDVDHPLPISNPLTSSQPIDDEIYEELPEEEEDS 271
Y V+ P+ IS S P D+E YE ++E+DS
Sbjct: 146 SSDTDSFYGAVERPVDIS---LSPYPTDNEDYEH--DDEDDS 182
>gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 51.2 bits (121), Expect = 1e-06
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 117 VLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNT 176
V KAGYL K+ L +W R+ + K YY+ S +G F++ GY+ M
Sbjct: 27 VAKAGYLHKKGGTQLQL-LKWPLRFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAA 85
Query: 177 LRKDGKKDCCFEISAPDK--RIYQFTAASPKDAEEWVQQLKFVLQDM-ESDIIPEDYDER 233
F+I K R + F+A+S ++ + W+ L+ + E +P D +
Sbjct: 86 EETTSNNVFPFKIIHISKKHRTWFFSASSEEERKSWMALLRREIGHFHEKKDLPLDTSDS 145
Query: 234 G----ELYDDVDHPLPISNPLTSSQPIDDEIYEELPEEEEDS 271
Y V+ P+ IS S P D+E YE ++E+DS
Sbjct: 146 SSDTDSFYGAVERPVDIS---LSPYPTDNEDYEH--DDEDDS 182
>gi|110349763 cytohesin 1 isoform 2 [Homo sapiens]
Length = 397
Score = 51.2 bits (121), Expect = 1e-06
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 25/100 (25%)
Query: 137 WQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKDGKKDCCFEISAPDKR- 195
W++RW L+ YY+ DK+ +G ++ S+R +D KK CFE+ PD +
Sbjct: 277 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIRE----VEDSKKPNCFELYIPDNKD 332
Query: 196 --------------------IYQFTAASPKDAEEWVQQLK 215
+Y+ +A +P++ EEW++ +K
Sbjct: 333 QVIKACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIK 372
>gi|4758964 cytohesin 1 isoform 1 [Homo sapiens]
Length = 398
Score = 51.2 bits (121), Expect = 1e-06
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 25/100 (25%)
Query: 137 WQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKDGKKDCCFEISAPDKR- 195
W++RW L+ YY+ DK+ +G ++ S+R +D KK CFE+ PD +
Sbjct: 278 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIRE----VEDSKKPNCFELYIPDNKD 333
Query: 196 --------------------IYQFTAASPKDAEEWVQQLK 215
+Y+ +A +P++ EEW++ +K
Sbjct: 334 QVIKACKTEADGRVVEGNHTVYRISAPTPEEKEEWIKCIK 373
>gi|194733753 phosphoinositide-binding protein PIP3-E isoform 1
[Homo sapiens]
Length = 438
Score = 50.1 bits (118), Expect = 3e-06
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 109 IAAQDLPFVLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG 168
I+ +DL G+L K+++ SFL +W+K W L + Y+Y + ++ G +
Sbjct: 35 ISCKDLGHADCQGWLYKKKEKGSFLSNKWKKFWVILKGSSLYWYSNQMAEKADGFVNLPD 94
Query: 169 YSVRMNNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIPE 228
++V + KK F+IS P + + F A + ++ W+ +L + ES E
Sbjct: 95 FTVER----ASECKKKHAFKISHPQIKTFYFAAENVQEMNVWLNKLGSAVIHQESTTKDE 150
Query: 229 DYDERGELYD 238
+ E D
Sbjct: 151 ECYSESEQED 160
>gi|194733747 phosphoinositide-binding protein PIP3-E isoform 1
[Homo sapiens]
Length = 438
Score = 50.1 bits (118), Expect = 3e-06
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 109 IAAQDLPFVLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG 168
I+ +DL G+L K+++ SFL +W+K W L + Y+Y + ++ G +
Sbjct: 35 ISCKDLGHADCQGWLYKKKEKGSFLSNKWKKFWVILKGSSLYWYSNQMAEKADGFVNLPD 94
Query: 169 YSVRMNNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIPE 228
++V + KK F+IS P + + F A + ++ W+ +L + ES E
Sbjct: 95 FTVER----ASECKKKHAFKISHPQIKTFYFAAENVQEMNVWLNKLGSAVIHQESTTKDE 150
Query: 229 DYDERGELYD 238
+ E D
Sbjct: 151 ECYSESEQED 160
>gi|40354212 phosphoinositide-binding protein PIP3-E isoform 2 [Homo
sapiens]
Length = 437
Score = 50.1 bits (118), Expect = 3e-06
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 109 IAAQDLPFVLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG 168
I+ +DL G+L K+++ SFL +W+K W L + Y+Y + ++ G +
Sbjct: 34 ISCKDLGHADCQGWLYKKKEKGSFLSNKWKKFWVILKGSSLYWYSNQMAEKADGFVNLPD 93
Query: 169 YSVRMNNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIPE 228
++V + KK F+IS P + + F A + ++ W+ +L + ES E
Sbjct: 94 FTVER----ASECKKKHAFKISHPQIKTFYFAAENVQEMNVWLNKLGSAVIHQESTTKDE 149
Query: 229 DYDERGELYD 238
+ E D
Sbjct: 150 ECYSESEQED 159
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 49.7 bits (117), Expect = 4e-06
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 290 TSGDKSTDYANFYQ--GLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGL 347
T KST A Q G++D T DEL+F +G +I +L+KE WW GE+ G +GL
Sbjct: 1146 TEPPKSTALAAVCQVIGMYDYTAQNDDELAFNKGQIINVLNKE--DPDWWKGEVNGQVGL 1203
Query: 348 VPKAYI 353
P Y+
Sbjct: 1204 FPSNYV 1209
Score = 36.2 bits (82), Expect = 0.047
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 303 QGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYI 353
Q L+ + L+F + DVI +L ++ WW GE++G G PK+Y+
Sbjct: 919 QALYPWRAKKDNHLNFNKNDVITVLEQQDM---WWFGEVQGQKGWFPKSYV 966
Score = 32.0 bits (71), Expect = 0.88
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 315 ELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYI 353
+L+F++GDVI + K+ + WW G + G+ P Y+
Sbjct: 1020 DLTFQQGDVILVTKKDGD---WWTGTVGDKAGVFPSNYV 1055
Score = 31.6 bits (70), Expect = 1.2
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 301 FYQGLWDCTGAFSDELSFKRGDVIYILSK-----EYNRYGWWVGEMKGAIGLVPKAY 352
+Y+ L+ DE++ + GD++ + + + GW GE+KG G P Y
Sbjct: 744 YYRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPANY 800
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 49.7 bits (117), Expect = 4e-06
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 290 TSGDKSTDYANFYQ--GLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGL 347
T KST A Q G++D T DEL+F +G +I +L+KE WW GE+ G +GL
Sbjct: 1146 TEPPKSTALAAVCQVIGMYDYTAQNDDELAFNKGQIINVLNKE--DPDWWKGEVNGQVGL 1203
Query: 348 VPKAYI 353
P Y+
Sbjct: 1204 FPSNYV 1209
Score = 36.2 bits (82), Expect = 0.047
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 303 QGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYI 353
Q L+ + L+F + DVI +L ++ WW GE++G G PK+Y+
Sbjct: 919 QALYPWRAKKDNHLNFNKNDVITVLEQQDM---WWFGEVQGQKGWFPKSYV 966
Score = 32.0 bits (71), Expect = 0.88
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 315 ELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYI 353
+L+F++GDVI + K+ + WW G + G+ P Y+
Sbjct: 1020 DLTFQQGDVILVTKKDGD---WWTGTVGDKAGVFPSNYV 1055
Score = 31.6 bits (70), Expect = 1.2
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 301 FYQGLWDCTGAFSDELSFKRGDVIYILSK-----EYNRYGWWVGEMKGAIGLVPKAY 352
+Y+ L+ DE++ + GD++ + + + GW GE+KG G P Y
Sbjct: 744 YYRALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPANY 800
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 49.3 bits (116), Expect = 5e-06
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 118 LKAGYLEKRRKDHSFLGFE-WQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNT 176
LK G+L K+ S L W+KRW L ++ Y+ +D +++ KG + ++NT
Sbjct: 1214 LKQGWLHKKGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRTAKEIIDNT 1273
Query: 177 LRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMESDIIPEDYDER 233
+++G +I D R + A SP+DA +W L V + + I E +DE+
Sbjct: 1274 TKENG-----IDIIMAD-RTFHLIAESPEDASQWFSVLSQVHASTDQE-IQEMHDEQ 1323
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 48.9 bits (115), Expect = 7e-06
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 294 KSTDYANFYQGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYI 353
++ + Y+ L+D DEL+ +RGDV+ +LSK GWW GE +G G+ P ++
Sbjct: 178 QTVSHPEVYRVLFDYQPEAPDELALRRGDVVKVLSKTTEDKGWWEGECQGRRGVFPDNFV 237
Query: 354 M 354
+
Sbjct: 238 L 238
Score = 32.3 bits (72), Expect = 0.67
Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 313 SDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYI 353
+DEL + G+++ ++ + + GWW+G+ G +G P ++
Sbjct: 99 ADELKLQAGEIVEMIKEIED--GWWLGKKNGQLGAFPSNFV 137
Score = 28.5 bits (62), Expect = 9.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 314 DELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYIMEM 356
DELS GDV+ + R GW GE G GL P+ + E+
Sbjct: 15 DELSLAPGDVVRQVRWVPAR-GWLRGEFGGRYGLFPERLVQEI 56
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 48.9 bits (115), Expect = 7e-06
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 294 KSTDYANFYQGLWDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVGEMKGAIGLVPKAYI 353
++ + Y+ L+D DEL+ +RGDV+ +LSK GWW GE +G G+ P ++
Sbjct: 67 QTVSHPEVYRVLFDYQPEAPDELALRRGDVVKVLSKTTEDKGWWEGECQGRRGVFPDNFV 126
Query: 354 M 354
+
Sbjct: 127 L 127
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 48.9 bits (115), Expect = 7e-06
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 117 VLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNT 176
VLK GYL KR L W +RW L + Y+GS++ K+++G +D + +
Sbjct: 217 VLKQGYLWKR----GHLRRNWAERWFQLQPSCLCYFGSEECKEKRGIIPLDAHCC-VEVL 271
Query: 177 LRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQ 219
+DGK+ C F + + R Y+ +A+ + +EW ++ ++
Sbjct: 272 PDRDGKR-CMFCVKTAN-RTYEMSASDTRQRQEWTAAIQMAIR 312
>gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Homo
sapiens]
Length = 1034
Score = 48.9 bits (115), Expect = 7e-06
Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 9/194 (4%)
Query: 95 KDDEAPSDGAQFPPIAAQDLPFVLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGS 154
K ++ P G I+ +DL G+L K++ S+ +W+K W L Y+Y +
Sbjct: 549 KKNKGPIAGKSKRRISCKDLGRGDCEGWLWKKKDAKSYFSQKWKKYWFVLKDASLYWYIN 608
Query: 155 DKDKQQKGEFAIDGYSVRMNNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQL 214
++D++ +G ++ + + + R K F+ P + + F A D W+ ++
Sbjct: 609 EEDEKAEGFISLPEFKIDRASECR----KKYAFKACHPKIKSFYFAAEHLDDMNRWLNRI 664
Query: 215 KFVLQD-MESDIIPEDYDERGEL-YDDVDHPLPISNPLTSSQPIDDEIYEELPEEEEDSA 272
+ E + I ++ D E ++ D P S P S P + Y P S
Sbjct: 665 NMLTAGYAERERIKQEQDYWSESDKEEADTP---STPKQDSPPPPYDTYPRPPSMSCASP 721
Query: 273 PVKVEEQRKMSQDS 286
V+ + R S ++
Sbjct: 722 YVEAKHSRLSSTET 735
>gi|189491778 nephrocystin 1 isoform 4 [Homo sapiens]
Length = 614
Score = 48.5 bits (114), Expect = 9e-06
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 246 ISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYANFYQGL 305
+ P + + E E+ EEED+ + EE+ K +S ++G++ Y +
Sbjct: 49 VGAPTEEEEESESEDSEDSGGEEEDA---EEEEEEKEENESHKWSTGEE-------YIAV 98
Query: 306 WDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVG-EMKGAIGLVPKAYI 353
D T +L+FK+G+++ ++ K+ + GWW+ + KG GLVP+ Y+
Sbjct: 99 GDFTAQQVGDLTFKKGEILLVIEKKPD--GWWIAKDAKGNEGLVPRTYL 145
>gi|189491776 nephrocystin 1 isoform 3 [Homo sapiens]
Length = 677
Score = 48.5 bits (114), Expect = 9e-06
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 246 ISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYANFYQGL 305
+ P + + E E+ EEED+ + EE+ K +S ++G++ Y +
Sbjct: 111 VGAPTEEEEESESEDSEDSGGEEEDA---EEEEEEKEENESHKWSTGEE-------YIAV 160
Query: 306 WDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVG-EMKGAIGLVPKAYI 353
D T +L+FK+G+++ ++ K+ + GWW+ + KG GLVP+ Y+
Sbjct: 161 GDFTAQQVGDLTFKKGEILLVIEKKPD--GWWIAKDAKGNEGLVPRTYL 207
>gi|189491774 nephrocystin 1 isoform 2 [Homo sapiens]
Length = 732
Score = 48.5 bits (114), Expect = 9e-06
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 246 ISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYANFYQGL 305
+ P + + E E+ EEED+ + EE+ K +S ++G++ Y +
Sbjct: 111 VGAPTEEEEESESEDSEDSGGEEEDA---EEEEEEKEENESHKWSTGEE-------YIAV 160
Query: 306 WDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVG-EMKGAIGLVPKAYI 353
D T +L+FK+G+++ ++ K+ + GWW+ + KG GLVP+ Y+
Sbjct: 161 GDFTAQQVGDLTFKKGEILLVIEKKPD--GWWIAKDAKGNEGLVPRTYL 207
>gi|46397398 nephrocystin 1 isoform 1 [Homo sapiens]
Length = 733
Score = 48.5 bits (114), Expect = 9e-06
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 246 ISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYANFYQGL 305
+ P + + E E+ EEED+ + EE+ K +S ++G++ Y +
Sbjct: 111 VGAPTEEEEESESEDSEDSGGEEEDA---EEEEEEKEENESHKWSTGEE-------YIAV 160
Query: 306 WDCTGAFSDELSFKRGDVIYILSKEYNRYGWWVG-EMKGAIGLVPKAYI 353
D T +L+FK+G+++ ++ K+ + GWW+ + KG GLVP+ Y+
Sbjct: 161 GDFTAQQVGDLTFKKGEILLVIEKKPD--GWWIAKDAKGNEGLVPRTYL 207
>gi|4758968 cytohesin 3 [Homo sapiens]
Length = 399
Score = 47.8 bits (112), Expect = 2e-05
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 25/100 (25%)
Query: 137 WQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKDGKKDCCFEISAPDKR- 195
W++RW L+ YY+ DK+ +G ++ S+R +D +K CFE+ P +
Sbjct: 281 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIRE----VEDPRKPNCFELYNPSHKG 336
Query: 196 --------------------IYQFTAASPKDAEEWVQQLK 215
+Y+ +A SP++ EEW++ +K
Sbjct: 337 QVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIK 376
>gi|188497618 connector enhancer of kinase suppressor of Ras 1 [Homo
sapiens]
Length = 713
Score = 47.8 bits (112), Expect = 2e-05
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 18/144 (12%)
Query: 121 GYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYSVRMNNTLRKD 180
G+L R+ F+G W++RW L Y+Y +D++ +G + YS+ + D
Sbjct: 401 GWLLLRKAPGGFMGPRWRRRWFVLKGHTLYWYRQPQDEKAEGLINVSNYSLESGH----D 456
Query: 181 GKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVL--------------QDMESDII 226
KK F+++ + + F A + D WV+ L + +D S+
Sbjct: 457 QKKKYVFQLTHDVYKPFIFAADTLTDLSMWVRHLITCISKYQSPGRAPPPREEDCYSETE 516
Query: 227 PEDYDERGELYDDVDHPLPISNPL 250
ED D+ + P +PL
Sbjct: 517 AEDPDDEAGSHSASPSPAQAGSPL 540
>gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain
1 isoform c [Homo sapiens]
Length = 1450
Score = 47.4 bits (111), Expect = 2e-05
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 4 PSSTSSPYPLPEEIR----NLLADVETFVADILKGEN------LSKKAKEKRESLIKKIK 53
P SP P P EI L + + D + E + K +E S + +
Sbjct: 202 PPQPPSPPPCPPEIPPKPVRLFPEFDDSDYDEVPEEGPGAPARVMTKKEEPPPSRVPRAV 261
Query: 54 DVKSIYLQEFQDKGDAEDGEEYDD-PFAGPPD--------TISLASERYDKDDEAPSDGA 104
V S+ + + GD + EE DD + G P+ ++SL S P DG
Sbjct: 262 RVASLLSEGEELSGDDQGDEEEDDHAYEGVPNGGWHTSSLSLSLPSTIAAPH---PMDG- 317
Query: 105 QFPPIAAQDLPFVLKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEF 164
PP + + V+KAG+L+K S++ +QKRW L Y+ S+KD K
Sbjct: 318 --PPGGSTPVTPVIKAGWLDKNPPQGSYI---YQKRWVRLDTDHLRYFDSNKDAYSKRFI 372
Query: 165 AIDGYSVRMNNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKFVLQDMES 223
++ S D FE+ + R + F A S + +EW+Q L+ + + +
Sbjct: 373 SVACIS-------HVAAIGDQKFEV-ITNNRTFAFRAESDVERKEWMQALQQAMAEQRA 423
Score = 41.2 bits (95), Expect = 0.001
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 114 LPFVLKAGYLEKRRKDHSFLGF-----EWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG 168
LP V +G+L K L E+ +RWC L V Y+ +++ GE
Sbjct: 741 LPTVSHSGFLYKTASAGKLLQDRRAREEFSRRWCVLGDGVLSYFENERAVTPNGEIRASE 800
Query: 169 YSVRMNNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQL-KFVLQDMESDIIP 227
G + FE+ +R+Y F S + A EWV+ + K + + D++
Sbjct: 801 IVCLAVPPPDTHGFEH-TFEVYTEGERLYLFGLESAEQAHEWVKCIAKAFVPPLAEDLLA 859
Query: 228 EDYDERGEL 236
D++ G L
Sbjct: 860 RDFERLGRL 868
>gi|182765466 FCH and double SH3 domains 2 [Homo sapiens]
Length = 740
Score = 47.4 bits (111), Expect = 2e-05
Identities = 58/233 (24%), Positives = 91/233 (39%), Gaps = 40/233 (17%)
Query: 137 WQKRWCALSKTVFYYYGSDKDKQQKGEF-----AIDGYSVRMNNTLRK---DGKKDCCFE 188
W + S + +D ++++ EF D S + TLR K ++
Sbjct: 422 WARPPAVTSNGTLHSLNADTEREEGEEFEDNMDVFDDSSSSPSGTLRNYPLTCKVVYSYK 481
Query: 189 ISAPDKRIYQ----FTAASPKDAEEWVQQLKFVLQDMESDIIPEDYDERGELYDDVDHPL 244
S PD+ + D E+WV+ V Q +PE Y +
Sbjct: 482 ASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQ---VGYVPEKYLQ-----------F 527
Query: 245 PISNPLTSSQPIDDEIYEELPEEEEDSAPVKVEEQRKMSQDSVHHTSGDKSTDYANFYQG 304
P SN L S + + L + S + ++ S++ GD S F +
Sbjct: 528 PTSNSLLS-------MLQSLAALDSRSHTSSNSTEAELVSGSLN---GDASVC---FVKA 574
Query: 305 LWDCTGAFSDELSFKRGDVIYILSKE-YNRYGWWVGEMKGAIGLVPKAYIMEM 356
L+D G DELSF G +I IL+KE + G+W GE G IG+ P + E+
Sbjct: 575 LYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEEL 627
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,258,711
Number of Sequences: 37866
Number of extensions: 762907
Number of successful extensions: 3431
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 224
Number of HSP's that attempted gapping in prelim test: 2979
Number of HSP's gapped (non-prelim): 544
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.