NPHP1 30256

Name: NPHP1	Sequence: fasta or formatted (733aa)		NCBI GI: 46397398
Description: nephrocystin 1 isoform 1		Referenced in: Kidney Non-Receptor Tyrosine Kinase Pathways
Other entries for this name: alt prot [732aa] nephrocystin 1 isoform 2 alt prot [677aa] nephrocystin 1 isoform 3 alt prot [614aa] nephrocystin 1 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 40 1 C cysteine 1.4 10 1 D aspartate 5.0 37 1 E glutamate 10.4 76 6 F phenylalanine 3.5 26 1 G glycine 5.6 41 2 H histidine 1.8 13 1 I isoleucine 4.9 36 1 K lysine 5.2 38 2 L leucine 11.7 86 2 M methionine 2.2 16 1 N asparagine 3.7 27 1 P proline 4.8 35 2 Q glutamine 5.6 41 2 R arginine 6.4 47 3 S serine 7.9 58 2 T threonine 5.5 40 2 V valine 5.3 39 1 W tryptophan 1.8 13 2 Y tyrosine 1.9 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nephrocystin 1 isoform 1 NPHP1 0.995 nephrocystin 1 isoform 2 NPHP1 0.867 nephrocystin 1 isoform 3 NPHP1 0.735 nephrocystin 1 isoform 4 CDC2L1 0.027 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.027 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.027 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.027 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L2 0.026 cell division cycle 2-like 2 isoform 4 CDC2L2 0.026 cell division cycle 2-like 2 isoform 1 CDC2L1 0.024 cell division cycle 2-like 1 (PITSLRE proteins) isof... ITSN2 0.022 intersectin 2 isoform 3 ITSN2 0.022 intersectin 2 isoform 1 ITSN2 0.022 intersectin 2 isoform 2 TRIP10 0.022 thyroid hormone receptor interactor 10 CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... RPGR 0.021 retinitis pigmentosa GTPase regulator isoform C [Hom... CRK 0.021 v-crk sarcoma virus CT10 oncogene homolog isoform a ... CRK 0.020 v-crk sarcoma virus CT10 oncogene homolog isoform b ... ABI2 0.020 abl interactor 2 EIF5B 0.020 eukaryotic translation initiation factor 5B CRKL 0.019 v-crk sarcoma virus CT10 oncogene homolog (avian)-lik... CENPB 0.019 centromere protein B MYT1 0.019 myelin transcription factor 1 SH3PXD2A 0.019 SH3 multiple domains 1 FNBP1L 0.018 formin binding protein 1-like isoform 1 FNBP1L 0.018 formin binding protein 1-like isoform 2 HUWE1 0.018 HECT, UBA and WWE domain containing 1 TTBK1 0.018 tau tubulin kinase 1 SRGAP2 0.018 SLIT-ROBO Rho GTPase activating protein 2 isoform a... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.