Guide to the Human Genome
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Name: SH3BP2 Sequence: fasta or formatted (561aa) NCBI GI: 170014703
Description:

SH3-domain binding protein 2 isoform a

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt mRNA [561aa] SH3-domain binding protein 2 isoform a
alt prot [589aa] SH3-domain binding protein 2 isoform c
alt prot [618aa] SH3-domain binding protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         39           2
 C cysteine            1.4          8           1
 D aspartate           5.3         30           2
 E glutamate           6.8         38           3
 F phenylalanine       4.1         23           2
 G glycine             5.3         30           2
 H histidine           3.4         19           1
 I isoleucine          2.1         12           2
 K lysine              5.9         33           2
 L leucine             7.5         42           3
 M methionine          2.5         14           1
 N asparagine          2.1         12           2
 P proline            14.4         81           5
 Q glutamine           2.0         11           1
 R arginine            6.4         36           2
 S serine              9.8         55           3
 T threonine           4.8         27           2
 V valine              5.2         29           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain binding protein 2 isoform a 
SH3BP2                1.000   SH3-domain binding protein 2 isoform b 
SH3BP2                1.000   SH3-domain binding protein 2 isoform c 
SH3BP2                1.000   SH3-domain binding protein 2 isoform a 
WASF1                 0.036   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.036   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.036   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.036   Wiskott-Aldrich syndrome protein family member 1 [Hom...
NACA                  0.034   nascent polypeptide-associated complex alpha subuni...
NHSL1                 0.033   NHS-like 1 
FLJ22184              0.033   PREDICTED: hypothetical protein LOC80164 
MLL4                  0.033   myeloid/lymphoid or mixed-lineage leukemia 4 
KIAA0754              0.033   hypothetical protein LOC643314 
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
WIPF1                 0.030   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.030   WAS/WASL interacting protein family, member 1 
ZNF828                0.030   zinc finger protein 828 
TNK2                  0.030   tyrosine kinase, non-receptor, 2 isoform 1 
TNK2                  0.030   tyrosine kinase, non-receptor, 2 isoform 2 
SFPQ                  0.030   splicing factor proline/glutamine rich (polypyrimidin...
TTN                   0.029   titin isoform N2-A 
WIPF3                 0.029   WAS/WASL interacting protein family, member 3 [Homo...
RERE                  0.029   atrophin-1 like protein isoform b 
RERE                  0.029   atrophin-1 like protein isoform a 
RERE                  0.029   atrophin-1 like protein isoform a 
PRG4                  0.028   proteoglycan 4 isoform D 
PRG4                  0.028   proteoglycan 4 isoform C 
PRG4                  0.028   proteoglycan 4 isoform B 
PRG4                  0.028   proteoglycan 4 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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